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IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015508

Arc-Vir

IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015508

Quality

87.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 20-155_208-227
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3isrA01 3.10.620.30 Alpha Beta › Roll › C8orf32 fold › 0.78 58.0 5.42e-01 100.0% 64.3%
1ex0B02 3.90.260.10 Alpha Beta › Alpha-Beta Complex › Coagulation Factor XIII; Chain A, domain 2 › Transglutaminase-like 0.68 64.0 4.98e-01 100.0% 73.9%
3ef2A02 3.30.460.70 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.67 45.0 4.82e-01 89.7% 77.5%
3kd4A02 3.10.620.30 Alpha Beta › Roll › C8orf32 fold › 0.66 51.0 5.15e-01 100.0% 78.8%
2ijaA00 3.30.2140.20 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › 0.65 61.0 4.88e-01 100.0% 67.8%
7qi3A01 3.30.2140.20 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › 0.65 61.0 4.75e-01 100.0% 71.3%
3lnbA00 3.30.2140.20 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › 0.65 60.0 5.07e-01 100.0% 70.2%
4fgoA00 3.10.620.30 Alpha Beta › Roll › C8orf32 fold › 0.62 56.0 5.36e-01 98.1% 85.6%
2f4mA01 3.10.620.30 Alpha Beta › Roll › C8orf32 fold › 0.61 52.0 4.49e-01 88.5% 67.0%
2qsfA01 3.90.260.10 Alpha Beta › Alpha-Beta Complex › Coagulation Factor XIII; Chain A, domain 2 › Transglutaminase-like 0.61 57.0 4.51e-01 100.0% 76.6%
4g29A00 3.10.670.10 Alpha Beta › Roll › Secreted effector protein ssei fold › Secreted effector protein ssei. 0.60 47.0 4.60e-01 96.2% 75.9%
4hdoA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 27.0 3.43e-01 87.2% 82.6%
1mixA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 27.0 3.35e-01 88.5% 82.8%
5iz3A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.50 40.0 3.87e-01 84.0% 88.5%
2ip6A00 1.20.1440.140 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.50 24.0 3.19e-01 95.5% 81.6%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3281165 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.77 58.0 5.99e-01 100.0% 82.1%
4945617 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.77 57.0 5.72e-01 100.0% 74.4%
5069875 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.76 59.0 4.87e-01 100.0% 48.2%
4942072 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.76 61.0 5.93e-01 100.0% 75.9%
3947087 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.76 59.0 5.89e-01 100.0% 78.1%
5029583 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.76 58.0 6.05e-01 100.0% 84.8%
5077834 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.75 58.0 4.67e-01 100.0% 44.3%
5064595 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.75 58.0 5.11e-01 100.0% 56.4%
5054279 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.75 57.0 5.67e-01 100.0% 76.2%
3513887 219.1.1.97 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.74 59.0 5.39e-01 100.0% 64.5%
4978783 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.74 56.0 5.77e-01 100.0% 81.3%
3871299 219.1.1.97 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.73 59.0 5.26e-01 100.0% 61.9%
3597636 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.73 57.0 4.83e-01 100.0% 52.1%
3972374 219.1.1.96 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_i_TM 0.73 51.0 5.61e-01 100.0% 88.0%
5067408 219.1.1.97 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.73 60.0 5.62e-01 100.0% 72.3%
4028717 219.1.1.97 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.72 55.0 4.98e-01 100.0% 59.5%
4953249 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.72 56.0 5.63e-01 100.0% 80.0%
4969783 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.72 58.0 4.56e-01 100.0% 43.1%
4954944 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.69 56.0 5.69e-01 100.0% 85.2%
5078205 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.69 59.0 5.75e-01 91.7% 81.8%
5022714 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.69 53.0 5.64e-01 85.9% 88.6%
5029334 219.1.1.76 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 0.68 60.0 5.83e-01 100.0% 85.7%
4213984 219.1.1.76 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 0.68 57.0 5.47e-01 100.0% 78.9%
5012873 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.68 57.0 5.16e-01 100.0% 67.3%
2532980 219.1.1.53 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Vasohibin 0.68 62.0 5.25e-01 100.0% 65.4%
4995535 219.1.1.76 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 0.67 64.0 5.97e-01 100.0% 85.9%
3253551 219.1.1.6 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.67 63.0 5.13e-01 100.0% 67.8%
3929966 219.1.1.97 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.67 62.0 5.57e-01 98.1% 80.0%
5060353 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.67 59.0 5.31e-01 98.1% 70.7%
4959592 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.67 48.0 5.06e-01 89.1% 81.4%
3248113 219.1.1.6 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.66 62.0 5.06e-01 100.0% 67.2%
4503485 219.1.1.111 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core, Rad4 0.66 55.0 4.23e-01 87.2% 76.0%
3627686 219.1.1.97 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.66 62.0 5.27e-01 98.7% 71.5%
3532488 219.1.1.22 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Rad4 0.66 55.0 4.62e-01 93.6% 53.5%
5023085 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.65 55.0 5.46e-01 87.2% 85.6%
4487335 219.1.1.6 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.65 61.0 4.98e-01 100.0% 63.3%
3327697 219.1.1.91 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › EDR1 0.65 52.0 4.68e-01 83.3% 74.5%
3253640 219.1.1.6 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.65 60.0 4.94e-01 100.0% 65.5%
4980573 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.65 53.0 4.96e-01 92.3% 70.5%
3221476 219.1.1.97 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.64 60.0 5.29e-01 98.7% 73.6%
4992782 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.64 55.0 5.40e-01 91.0% 82.9%
3882396 219.1.1.97 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.64 60.0 5.16e-01 98.1% 73.0%
5008468 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.64 48.0 4.79e-01 91.7% 75.0%
3253953 219.1.1.6 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.64 60.0 5.23e-01 100.0% 89.8%
3921608 219.1.1.22 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Rad4 0.64 55.0 4.70e-01 93.6% 58.7%
3532104 219.1.1.97 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.64 59.0 4.94e-01 98.1% 68.6%
3789397 219.1.1.22 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Rad4 0.64 59.0 4.72e-01 100.0% 82.7%
5064007 219.1.1.76 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 0.63 57.0 5.45e-01 100.0% 82.8%
5063096 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.63 54.0 4.37e-01 91.0% 72.4%
3550856 219.1.1.27 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Menin 0.63 53.0 4.54e-01 91.7% 58.3%
3285183 219.1.1.6 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.63 58.0 4.75e-01 100.0% 66.5%
3704372 219.1.1.97 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.62 58.0 4.86e-01 98.7% 66.8%
3403157 219.1.1.97 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.62 58.0 4.99e-01 98.1% 71.7%
3165617 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.61 57.0 5.23e-01 99.4% 83.0%
3967895 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.61 57.0 5.11e-01 100.0% 78.6%
4634055 219.1.1.76 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 0.61 54.0 5.02e-01 100.0% 77.4%
3740361 219.1.1.22 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Rad4 0.61 57.0 4.56e-01 99.4% 76.2%
4958082 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.60 54.0 5.17e-01 100.0% 83.8%
3347055 219.1.1.111 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core, Rad4 0.60 56.0 4.63e-01 100.0% 67.0%
3573608 219.1.1.111 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core, Rad4 0.60 55.0 4.66e-01 99.4% 73.6%
4951884 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.59 56.0 5.23e-01 100.0% 85.4%
5021450 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.58 54.0 5.09e-01 100.0% 83.7%
3762030 219.1.1.14 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Josephin 0.52 38.0 4.16e-01 89.1% 93.6%
4207636 220.1.1.7 beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.50 26.0 3.12e-01 88.5% 73.3%
D2 medium residues 156-207
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3rklA00 6.10.140.1640 Special › Helix non-globular › Helix Hairpins › 0.60 40.0 3.49e-01 92.3% 45.0%
4mbsA00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.58 42.0 2.60e-01 78.8% 36.7%
3oqgA00 3.40.1440.50 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › 0.58 42.0 2.91e-01 86.5% 22.2%
5e0sB00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.54 47.0 3.21e-01 100.0% 93.0%
3wxyA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.54 40.0 3.00e-01 86.5% 76.6%
3mfqA01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.54 41.0 3.07e-01 84.6% 56.0%
3euoA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.53 41.0 3.04e-01 90.4% 80.3%
1e29A00 1.10.760.10 Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain 0.53 41.0 3.20e-01 92.3% 80.0%
4ijdA02 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.53 30.0 3.69e-01 86.5% 90.3%
1zcdA00 1.20.1530.10 Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › Na+/H+ antiporter like domain 0.53 44.0 2.69e-01 98.1% 60.1%
1hywA00 3.30.1580.10 Alpha Beta › 2-Layer Sandwich › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W 0.52 30.0 2.96e-01 88.5% 46.6%
4ijaA03 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.51 42.0 3.16e-01 100.0% 61.3%
4ofzA01 1.20.58.1800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 40.0 3.18e-01 88.5% 65.5%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4004145 304.48.1.0 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.67 46.0 3.01e-01 71.2% 18.1%
4057956 2004.1.1.35 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Bac_DnaA 0.62 45.0 2.95e-01 78.8% 71.7%
3240522 2492.1.1.2 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB 0.57 41.0 2.73e-01 76.9% 29.0%
4982137 4033.1.1.1 alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA_dh_N 0.56 37.0 3.29e-01 92.3% 46.7%
4145802 3236.1.1.5 alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Na_H_antiport_1 0.56 46.0 2.76e-01 92.3% 58.3%
5057162 504.1.1.0 a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB 0.54 39.0 3.02e-01 76.9% 98.4%
3420078 109.4.1.1267 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif 0.54 45.0 2.53e-01 94.2% 53.2%
3226369 2004.1.2.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › PEP carboxykinase catalytic C-terminal domain › PEPCK_GTP 0.53 41.0 2.63e-01 88.5% 72.1%
3965667 109.4.1.520 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HemY_N 0.52 42.0 2.49e-01 88.5% 16.5%
4995140 2484.1.1.124 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.51 42.0 3.07e-01 90.4% 80.0%
3662464 7581.1.1.6 a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Chal_sti_synt_C 0.51 39.0 2.81e-01 84.6% 62.4%
4938390 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 41.0 3.10e-01 90.4% 38.8%