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IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_100001551
Arc-VirIMGVR_UViG_3300028840_006907-3300028840-Ga0309773_100001551
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 22-87
Domain cluster:
rep: MW677529.1__QXN72676.1__RCZAHN_67__00067__D79-157
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19419.6 best | DUF5983 | 27.8 | 3.50e-06 | 100.0% | 75.6% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ljwA00 | 3.30.428.40 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › Protein of unknown function DUF3067 | 0.61 | 42.0 | 3.63e-01 | 71.2% | 71.2% |
| 4b62A00 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.54 | 43.0 | 3.50e-01 | 92.4% | 97.2% |
| 2c1iA02 | 3.90.640.30 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › | 0.53 | 38.0 | 3.66e-01 | 75.8% | 97.4% |
| 7ecrA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 40.0 | 2.89e-01 | 83.3% | 80.3% |
| 2zc0A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.50 | 41.0 | 3.15e-01 | 98.5% | 76.0% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3246551 | 3561.1.1.0 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 | 0.56 | 46.0 | 2.83e-01 | 90.9% | 24.6% |
| 3972629 | 873.1.1.7 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › Arabinose_bd | 0.55 | 44.0 | 3.33e-01 | 97.0% | 52.8% |
| None | — | 0.54 | 45.0 | 3.55e-01 | 97.0% | 92.0% | |
| 3981506 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.53 | 43.0 | 3.43e-01 | 97.0% | 86.3% |
| 3964336 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.53 | 44.0 | 3.48e-01 | 97.0% | 92.0% |
| 4976643 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.53 | 37.0 | 3.10e-01 | 75.8% | 74.4% |
| 3620678 | 3561.1.1.0 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 | 0.52 | 43.0 | 2.78e-01 | 93.9% | 41.2% |
| 4634313 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.52 | 42.0 | 2.67e-01 | 97.0% | 82.7% |
| 5015446 | 7577.1.1.1 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 | 0.52 | 42.0 | 2.67e-01 | 97.0% | 82.7% |
| 4491189 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.51 | 35.0 | 3.07e-01 | 97.0% | 45.7% |
| 5041410 | 2006.1.1.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase | 0.50 | 42.0 | 2.90e-01 | 97.0% | 26.5% |