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IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_100001556
Arc-VirIMGVR_UViG_3300028840_006907-3300028840-Ga0309773_100001556
Identity
- Kingdom:
- archaea
Quality
85.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-85
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cerA02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.69 | 61.0 | 4.57e-01 | 100.0% | 48.5% |
| 3e0rB01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.68 | 40.0 | 3.45e-01 | 100.0% | 38.7% |
| 2o2xA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.67 | 38.0 | 2.81e-01 | 100.0% | 21.5% |
| 1gs5A00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.63 | 46.0 | 3.26e-01 | 97.5% | 24.0% |
| 4fd4A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.62 | 51.0 | 3.85e-01 | 93.7% | 49.1% |
| 1bkpA00 | 3.30.572.10 | Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain | 0.60 | 46.0 | 3.16e-01 | 82.3% | 76.6% |
| 3bqxA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.59 | 42.0 | 3.55e-01 | 75.9% | 83.5% |
| 3thxB01 | 3.40.1170.10 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › DNA repair protein MutS, domain I | 0.59 | 42.0 | 3.67e-01 | 88.6% | 47.3% |
| 3l7xA00 | 3.30.428.10 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like | 0.58 | 38.0 | 3.05e-01 | 100.0% | 33.1% |
| 3wndA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 45.0 | 3.63e-01 | 89.9% | 97.1% |
| 3ntvA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 42.0 | 3.17e-01 | 81.0% | 83.8% |
| 1ewqB01 | 3.40.1170.10 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › DNA repair protein MutS, domain I | 0.54 | 40.0 | 3.59e-01 | 89.9% | 55.1% |
| 3l86A00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.52 | 45.0 | 3.25e-01 | 100.0% | 95.9% |
| 1cfzA00 | 3.40.50.1450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HybD-like | 0.52 | 45.0 | 3.63e-01 | 100.0% | 88.9% |
| 5o7oC01 | 3.30.310.280 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.51 | 40.0 | 3.59e-01 | 91.1% | 84.8% |
| 1dpjA02 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.51 | 40.0 | 3.29e-01 | 94.9% | 44.8% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3166748 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.78 | 42.0 | 4.60e-01 | 100.0% | 64.6% |
| 3483191 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.78 | 43.0 | 5.05e-01 | 100.0% | 78.2% |
| 4587559 | 4263.2.1.0 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain | 0.70 | 40.0 | 4.13e-01 | 100.0% | 60.0% |
| 4386037 | 2004.1.1.414 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU, MMR_HSR1 | 0.69 | 56.0 | 4.07e-01 | 89.9% | 95.2% |
| 3914311 | 211.1.1.14 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › GLOD4_N | 0.69 | 38.0 | 4.47e-01 | 100.0% | 78.2% |
| 3544307 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.63 | 51.0 | 4.22e-01 | 84.8% | 72.6% |
| 5046158 | 266.1.1.1 ↗ | a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt | 0.63 | 49.0 | 3.66e-01 | 84.8% | 89.0% |
| 5059575 | 266.1.1.1 ↗ | a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt | 0.63 | 49.0 | 3.30e-01 | 83.5% | 71.7% |
| 4143734 | 4263.2.1.1 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext | 0.62 | 42.0 | 4.21e-01 | 98.7% | 68.8% |
| 4583417 | 4263.2.1.1 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext | 0.62 | 36.0 | 3.87e-01 | 97.5% | 67.7% |
| 3405434 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.61 | 49.0 | 3.64e-01 | 91.1% | 48.9% |
| 5005700 | 266.1.1.1 ↗ | a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt | 0.61 | 48.0 | 3.64e-01 | 83.5% | 84.0% |
| 3311826 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.59 | 53.0 | 4.21e-01 | 97.5% | 99.4% |
| 3445602 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.57 | 49.0 | 3.16e-01 | 94.9% | 57.5% |
| 3744348 | 5.1.4.331 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30861 | 0.57 | 50.0 | 3.06e-01 | 98.7% | 32.2% |
| 4643759 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.56 | 43.0 | 3.66e-01 | 89.9% | 48.6% |
| 3839290 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.55 | 48.0 | 4.56e-01 | 100.0% | 88.4% |
| 4128955 | 212.1.1.8 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribonuclease_P | 0.54 | 47.0 | 4.06e-01 | 100.0% | 76.9% |
| 4367744 | 212.1.1.8 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribonuclease_P | 0.54 | 40.0 | 3.49e-01 | 77.2% | 74.8% |
| 3296680 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.53 | 46.0 | 3.72e-01 | 98.7% | 84.5% |
| 4653780 | 3012.1.1.5 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › T6PP_C | 0.52 | 42.0 | 4.01e-01 | 94.9% | 86.0% |
| 3965471 | 2008.8.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › CglI restriction endonuclease H subunit C-terminal domain › CglI restriction endonuclease H subunit C-terminal domain › PF31274 | 0.51 | 43.0 | 3.67e-01 | 97.5% | 95.7% |
| 1887855 | 2004.1.1.26 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin | 0.51 | 38.0 | 2.74e-01 | 79.7% | 28.3% |
| 4324947 | 212.1.1.8 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribonuclease_P | 0.51 | 37.0 | 3.25e-01 | 77.2% | 63.3% |