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IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015597
Arc-VirIMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015597
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 54-193
Domain cluster:
rep: ON615601.1__UTS51982.1__X__00034__D5-121
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF25691.2 best | BW3TFN | 31.3 | 2.80e-07 | 65.0% | 32.8% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1n7zA01 | 2.60.340.10 | Mainly Beta › Sandwich › baseplate structural protein gp8, domain 1 › baseplate structural protein gp8, domain 1 | 0.68 | 61.0 | 5.73e-01 | 94.3% | 92.1% |
| 5tkyA04 | 2.60.34.10 | Mainly Beta › Sandwich › Substrate Binding Domain Of DNAk; Chain A, domain 1 › Substrate Binding Domain Of DNAk; Chain A, domain 1 | 0.54 | 34.0 | 3.73e-01 | 94.3% | 75.9% |
| 4xl1E01 | 2.60.40.3510 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 42.0 | 4.11e-01 | 99.3% | 80.0% |
| 3ufiA02 | 2.60.40.2630 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 34.0 | 3.60e-01 | 85.7% | 76.8% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4928608 | 3899.1.1.0 ↗ | beta complex topology › Baseplate structural protein gp8 › Baseplate structural protein gp8 › Baseplate structural protein gp8 | 0.90 | 71.0 | 6.75e-01 | 100.0% | 71.7% |
| 4932865 | 3899.1.1.0 ↗ | beta complex topology › Baseplate structural protein gp8 › Baseplate structural protein gp8 › Baseplate structural protein gp8 | 0.85 | 71.0 | 7.17e-01 | 100.0% | 87.1% |
| 2504393 | 3899.1.1.2 ↗ | beta complex topology › Baseplate structural protein gp8 › Baseplate structural protein gp8 › Baseplate structural protein gp8 › BW3TFN | 0.75 | 67.0 | 6.12e-01 | 94.3% | 91.7% |
| 4385045 | 11.1.1.987 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF30412 | 0.60 | 34.0 | 3.84e-01 | 79.3% | 71.8% |
| 2573861 | 511.1.1.1 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 | 0.57 | 37.0 | 3.99e-01 | 85.0% | 78.3% |