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IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015613
Arc-VirIMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015613
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-102
Domain cluster:
rep: IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_100001521__D4-131
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ul7A00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.77 | 54.0 | 5.42e-01 | 72.7% | 92.2% |
| 1aisA02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.71 | 50.0 | 5.34e-01 | 72.7% | 88.5% |
| 2hzmG01 | 3.30.310.180 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.70 | 50.0 | 4.78e-01 | 74.7% | 77.4% |
| 2gwcA00 | 3.30.590.20 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › | 0.68 | 50.0 | 3.29e-01 | 77.8% | 21.7% |
| 4py5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.66 | 46.0 | 5.20e-01 | 73.7% | 100.0% |
| 3vn5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.65 | 44.0 | 5.02e-01 | 71.7% | 100.0% |
| 2jpiA00 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.64 | 51.0 | 5.20e-01 | 93.9% | 87.5% |
| 3a7rA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.62 | 48.0 | 3.62e-01 | 81.8% | 56.0% |
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 39.0 | 4.56e-01 | 73.7% | 93.9% |
| 3f0zA01 | 3.30.310.260 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.61 | 47.0 | 4.57e-01 | 83.8% | 78.6% |
| 1ewqA04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.58 | 41.0 | 3.71e-01 | 74.7% | 82.4% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.57 | 35.0 | 2.84e-01 | 80.8% | 32.4% |
| 2ckwA03 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.56 | 37.0 | 3.50e-01 | 94.9% | 56.9% |
| 2wvxA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.55 | 45.0 | 3.25e-01 | 90.9% | 59.2% |
| 3ly1D01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 38.0 | 3.43e-01 | 100.0% | 55.0% |
| 1yj7B01 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.54 | 35.0 | 3.94e-01 | 80.8% | 93.0% |
| 3hz7A00 | 3.30.110.40 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain | 0.53 | 33.0 | 3.84e-01 | 94.9% | 84.9% |
| 5gaeG01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.53 | 41.0 | 4.41e-01 | 97.0% | 100.0% |
| 2cs7A00 | 3.10.50.90 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.52 | 24.0 | 3.01e-01 | 72.7% | 72.7% |
| 3bqxA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 45.0 | 4.04e-01 | 94.9% | 77.7% |
| 4djhA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.52 | 38.0 | 2.80e-01 | 77.8% | 62.0% |
| 1b96A00 | 3.40.600.10 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › DNA mismatch repair MutH/Restriction endonuclease, type II | 0.51 | 39.0 | 3.02e-01 | 82.8% | 95.5% |
| 1orvA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.51 | 38.0 | 2.51e-01 | 81.8% | 38.9% |
| 2ogqA01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.50 | 37.0 | 3.48e-01 | 78.8% | 80.2% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5048326 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.78 | 55.0 | 5.27e-01 | 73.7% | 80.0% |
| 5041453 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.77 | 54.0 | 5.81e-01 | 72.7% | 90.6% |
| 3739664 | 247.1.1.38 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C | 0.76 | 51.0 | 5.93e-01 | 71.7% | 97.1% |
| 5062306 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.75 | 53.0 | 5.56e-01 | 72.7% | 85.6% |
| 3416069 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.75 | 52.0 | 6.02e-01 | 75.8% | 100.0% |
| 4971751 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.75 | 59.0 | 5.51e-01 | 82.8% | 90.0% |
| 5002867 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.75 | 51.0 | 5.37e-01 | 70.7% | 82.2% |
| 4968280 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.72 | 50.0 | 5.26e-01 | 71.7% | 91.1% |
| 4993386 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.72 | 51.0 | 5.28e-01 | 73.7% | 81.1% |
| 3403609 | 247.1.1.38 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C | 0.72 | 49.0 | 5.40e-01 | 70.7% | 94.9% |
| 4985658 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.71 | 51.0 | 5.45e-01 | 75.8% | 94.1% |
| 3899940 | 331.4.1.9 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C | 0.70 | 49.0 | 5.38e-01 | 72.7% | 96.2% |
| 2722539 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.70 | 36.0 | 3.56e-01 | 87.9% | 47.2% |
| 5005470 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.68 | 51.0 | 5.14e-01 | 78.8% | 80.0% |
| 5028450 | 331.1.1.6 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF3378 | 0.68 | 46.0 | 5.27e-01 | 70.7% | 100.0% |
| 5009785 | 321.1.1.0 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase | 0.68 | 48.0 | 3.98e-01 | 73.7% | 51.4% |
| 4985641 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.67 | 50.0 | 4.70e-01 | 79.8% | 66.4% |
| 4521206 | 331.1.1.6 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF3378 | 0.66 | 45.0 | 5.17e-01 | 71.7% | 100.0% |
| 5014721 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.65 | 51.0 | 5.26e-01 | 94.9% | 87.4% |
| 5022991 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.63 | 52.0 | 5.48e-01 | 93.9% | 98.9% |
| 5037187 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.62 | 43.0 | 4.41e-01 | 70.7% | 82.1% |
| 4478959 | 331.1.1.6 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF3378 | 0.62 | 45.0 | 4.91e-01 | 99.0% | 100.0% |
| 4678264 | 331.1.1.6 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF3378 | 0.61 | 41.0 | 4.44e-01 | 70.7% | 85.0% |
| 4659650 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.61 | 42.0 | 4.35e-01 | 70.7% | 81.1% |
| 3515949 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.58 | 43.0 | 2.94e-01 | 78.8% | 56.6% |
| 3846164 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.57 | 43.0 | 3.01e-01 | 78.8% | 60.6% |
| 3928452 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.57 | 43.0 | 2.91e-01 | 78.8% | 55.9% |
| 3924998 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.57 | 42.0 | 2.83e-01 | 77.8% | 58.6% |
| 3228596 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.56 | 40.0 | 2.75e-01 | 76.8% | 87.4% |
| 3213981 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.56 | 43.0 | 2.89e-01 | 81.8% | 66.3% |
| 3875765 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.55 | 43.0 | 2.98e-01 | 83.8% | 61.8% |
| 3227661 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.55 | 41.0 | 2.86e-01 | 79.8% | 67.1% |
| 3717848 | 2007.2.3.9 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTPlike_phytase | 0.54 | 43.0 | 2.57e-01 | 96.0% | 11.6% |
| 4590279 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.54 | 40.0 | 2.80e-01 | 76.8% | 57.4% |
| 3519143 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.54 | 41.0 | 2.92e-01 | 81.8% | 61.0% |
| 3410006 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.54 | 39.0 | 2.79e-01 | 77.8% | 59.7% |
| 3220913 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.53 | 39.0 | 2.75e-01 | 76.8% | 57.8% |
| 3872321 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.53 | 40.0 | 2.75e-01 | 79.8% | 65.0% |
| 3600254 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.53 | 41.0 | 3.30e-01 | 81.8% | 56.2% |
| 2755218 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.51 | 39.0 | 3.04e-01 | 79.8% | 43.7% |
| 3391166 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.51 | 41.0 | 2.81e-01 | 89.9% | 86.8% |