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IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015636

Arc-Vir

IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015636

Quality

74.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 149-232
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4kc5C03 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.61 50.0 3.46e-01 90.5% 77.9%
4nsxA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 52.0 3.60e-01 100.0% 98.0%
1xffA00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.59 52.0 3.74e-01 96.4% 95.4%
6u5vB07 3.30.1120.100 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.59 40.0 3.45e-01 70.2% 86.0%
5h1kA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 49.0 3.30e-01 96.4% 95.4%
1dxkA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.57 48.0 3.56e-01 92.9% 88.7%
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.56 36.0 3.87e-01 100.0% 76.4%
2ymsC00 2.40.10.480 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.56 35.0 3.69e-01 100.0% 70.7%
2fhxA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.56 46.0 3.34e-01 91.7% 86.9%
3uv0B00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.54 43.0 4.14e-01 88.1% 82.8%
4nkbA01 3.30.1120.120 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.54 49.0 4.44e-01 100.0% 73.7%
4ghbA00 2.40.160.190 Mainly Beta › Beta Barrel › Porin › 0.53 41.0 2.98e-01 84.5% 32.5%
7sulB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 46.0 3.15e-01 100.0% 87.3%
6m90A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 45.0 3.18e-01 100.0% 83.7%
1lc5A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.52 35.0 3.14e-01 71.4% 72.8%
3weoA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.51 45.0 3.25e-01 100.0% 71.6%
4nsxA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 36.0 2.52e-01 75.0% 31.4%
3u7vA02 2.60.220.20 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › putative beta-Galactosidase from caulobacter crescentus 0.50 40.0 3.39e-01 86.9% 93.8%
3rbyA01 2.40.128.320 Mainly Beta › Beta Barrel › Lipocalin › Protein HRI1, N-terminal domain 0.50 44.0 3.69e-01 100.0% 84.0%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3998167 247.1.1.0 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase 0.57 46.0 3.30e-01 89.3% 90.4%
3635917 5.1.10.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.56 29.0 2.90e-01 85.7% 44.4%
4880573 247.1.1.1 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.56 47.0 3.52e-01 94.0% 78.6%
3930706 73.1.1.0 beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain 0.56 42.0 4.24e-01 85.7% 80.0%
4215116 6129.1.1.1 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.56 49.0 3.78e-01 94.0% 60.6%
4773067 5.1.4.40 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.56 35.0 3.69e-01 100.0% 70.7%
5053286 247.1.1.0 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase 0.55 48.0 3.27e-01 97.6% 67.6%
3990517 5.1.4.502 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_IFT80_2nd 0.55 48.0 2.97e-01 100.0% 43.5%
4863414 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 36.0 2.84e-01 70.2% 48.2%
4003932 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.54 49.0 4.36e-01 100.0% 74.2%
3237290 4357.1.1.0 beta barrels › WWE domain › WWE domain › WWE domain 0.53 41.0 4.00e-01 83.3% 94.7%
3167972 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.52 43.0 2.54e-01 95.2% 37.7%
3441153 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 44.0 2.82e-01 92.9% 90.8%
3483534 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 39.0 2.62e-01 81.0% 50.6%
3996624 5.1.5.164 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_IFT140_1st, Beta-prop_IFT140_2nd 0.51 39.0 2.59e-01 94.0% 18.7%
3445586 708.1.1.1 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › NAM 0.51 38.0 4.02e-01 81.0% 97.3%
3784757 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.50 38.0 2.43e-01 83.3% 48.1%
D2 medium residues 15-148
PDB
Domain cluster: representative
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4mu9B00 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.78 71.0 5.12e-01 98.5% 49.0%
4c1sA00 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.76 69.0 4.94e-01 98.5% 50.7%
4bojA00 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.76 68.0 5.02e-01 97.0% 70.8%
1fp3A00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.74 67.0 4.71e-01 97.8% 60.4%
7fhyB01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.74 65.0 5.08e-01 97.0% 69.8%
1eguA02 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.73 65.0 4.70e-01 97.8% 59.7%
1fbwA01 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.72 66.0 4.60e-01 100.0% 54.4%
3k3oA02 1.20.58.1360 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.65 39.0 4.88e-01 76.1% 96.4%
4epzA00 1.25.40.810 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › UpxZ 0.65 56.0 5.34e-01 94.0% 82.5%
4gpkF02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.64 52.0 4.29e-01 91.0% 48.3%
2p58C00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.63 44.0 4.77e-01 87.3% 85.7%
2nwbA02 1.20.58.480 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 45.0 3.76e-01 75.4% 96.6%
3opbA02 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.62 53.0 3.71e-01 94.8% 36.7%
4y6cA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 55.0 4.76e-01 99.3% 80.7%
5vjcA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.62 50.0 4.04e-01 87.3% 59.9%
1hu3A00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.61 54.0 4.75e-01 97.8% 88.2%
4yvoA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.61 48.0 5.00e-01 90.3% 94.1%
3tjzB00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.60 53.0 4.28e-01 98.5% 81.4%
1n4kA02 1.25.10.30 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › IP3 receptor type 1 binding core, RIH domain 0.58 43.0 4.21e-01 76.9% 86.5%
3n71A03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 46.0 4.02e-01 93.3% 55.4%
4aifA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 47.0 4.59e-01 89.6% 82.6%
3l9tA02 1.25.40.290 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat domains 0.56 43.0 4.51e-01 87.3% 91.5%
3qwwA03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 44.0 4.00e-01 91.8% 61.8%
1vw4L02 1.10.246.170 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.52 32.0 3.89e-01 81.3% 96.5%
2ggfA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.51 44.0 4.38e-01 95.5% 93.4%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3782629 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.71 59.0 3.67e-01 89.6% 21.6%
3599934 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.69 54.0 5.06e-01 82.1% 96.9%
3278128 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 56.0 5.50e-01 90.3% 86.2%
3403225 109.4.1.649 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF4807 0.66 49.0 5.29e-01 76.9% 93.6%
4027334 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 55.0 4.44e-01 91.0% 51.3%
4020513 109.4.1.447 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PI4K_N 0.65 56.0 4.22e-01 96.3% 61.1%
4011977 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 57.0 5.49e-01 96.3% 87.3%
3694087 3924.1.1.0 alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 0.65 54.0 3.97e-01 90.3% 80.8%
3705411 109.4.1.777 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 55.0 4.08e-01 93.3% 38.6%
3975612 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 54.0 4.75e-01 93.3% 77.6%
3610155 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 55.0 4.71e-01 95.5% 88.0%
4027696 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 56.0 5.06e-01 94.8% 89.4%
3334664 109.4.1.1304 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_10, TPR_12 0.64 53.0 3.81e-01 91.0% 71.9%
3705293 109.4.1.2184 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30302 0.64 57.0 4.04e-01 100.0% 51.9%
4021398 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 52.0 4.59e-01 91.0% 63.4%
3793706 109.4.1.941 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › LTN1_E3_ligase_5th 0.63 54.0 4.90e-01 95.5% 91.9%
3661756 109.4.1.2209 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_21, TPR_8, TPR_10, TPR_12 0.63 54.0 3.95e-01 94.0% 76.8%
3317995 109.4.1.1304 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_10, TPR_12 0.63 54.0 4.92e-01 94.8% 90.0%
3712352 109.4.1.210 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 0.63 48.0 4.26e-01 86.6% 55.0%
3278723 109.4.1.1825 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_10, TPR_12, TPR_16 0.62 53.0 4.88e-01 94.0% 72.0%
3371755 109.4.1.1286 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_12 0.62 52.0 5.01e-01 91.0% 91.3%
4643435 109.4.1.292 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › eIF3a_PCI_TPR-like 0.61 55.0 3.85e-01 97.8% 59.1%
3267219 109.4.1.1556 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cohesin_HEAT, PDS5 0.61 53.0 4.63e-01 94.0% 66.5%
3667599 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 46.0 4.42e-01 89.6% 67.5%
3821602 109.4.1.1412 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2, TPR_7, TPR_12 0.61 52.0 4.78e-01 94.8% 90.0%
3412810 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 45.0 4.37e-01 88.1% 68.4%
3285629 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 50.0 3.94e-01 91.0% 42.1%
5047286 109.4.1.207 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_2 0.60 53.0 4.60e-01 94.0% 69.0%
3696163 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 46.0 4.36e-01 81.3% 67.3%
4944774 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 50.0 3.95e-01 91.0% 46.6%
3651068 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 49.0 4.61e-01 94.0% 72.4%
5040479 109.4.1.198 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 0.58 52.0 3.55e-01 98.5% 34.9%
3475997 109.4.1.1264 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_16 0.58 47.0 4.63e-01 92.5% 83.6%
3931155 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 47.0 3.52e-01 88.1% 42.0%
3456276 226.1.1.9 a+b two layers › POZ domain › POZ domain › POZ domain › DUF3420 0.57 51.0 4.21e-01 97.0% 82.1%
4154150 226.1.1.11 a+b two layers › POZ domain › POZ domain › POZ domain › BTB+DUF3420 0.57 51.0 4.17e-01 98.5% 89.4%
4996244 3813.1.1.2 alpha bundles › DUF416 › DUF416 › DUF416 › Imm5_like 0.57 41.0 3.87e-01 82.8% 60.0%
3609402 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 48.0 4.25e-01 93.3% 75.4%
3729409 226.1.1.1 a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.56 49.0 4.59e-01 97.8% 86.5%
3999454 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 46.0 4.10e-01 94.0% 64.1%
4952623 3281.1.2.10 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit 8 (Nqo8)-related › NADHdeh_related 0.52 38.0 3.30e-01 75.4% 68.1%
3241203 544.1.1.0 alpha bundles › Functional domain of the splicing factor Prp18 › Functional domain of the splicing factor Prp18 › Functional domain of the splicing factor Prp18 0.50 38.0 3.98e-01 79.1% 88.3%