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IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015657
Arc-VirIMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015657
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-82
Domain cluster:
rep: IMGVR_UViG_3300005099_000205-3300005099-Ga0072682_10918728__D21-82
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4b6dB00 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.76 | 48.0 | 5.72e-01 | 85.4% | 93.0% |
| 4ffuB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.70 | 49.0 | 3.98e-01 | 73.2% | 80.7% |
| 3wewA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.66 | 45.0 | 3.26e-01 | 70.7% | 46.4% |
| 4rljA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.66 | 47.0 | 3.95e-01 | 75.6% | 88.9% |
| 3kh8B01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.65 | 49.0 | 3.95e-01 | 79.3% | 81.8% |
| 2bi0A02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.63 | 45.0 | 3.73e-01 | 74.4% | 80.3% |
| 4e3eA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.62 | 47.0 | 3.14e-01 | 82.9% | 36.2% |
| 1s9cC01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.61 | 46.0 | 3.85e-01 | 80.5% | 84.8% |
| 6rupA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 43.0 | 3.94e-01 | 76.8% | 98.2% |
| 1jkfA03 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.58 | 29.0 | 3.32e-01 | 72.0% | 61.7% |
| 1gydB00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 48.0 | 3.21e-01 | 95.1% | 52.1% |
| 2f3xA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 45.0 | 3.76e-01 | 90.2% | 79.0% |
| 1kiaA01 | 3.30.46.10 | Alpha Beta › 2-Layer Sandwich › Glycine N-methyltransferase; chain A, domain 1 › Glycine N-methyltransferase, chain A, domain 1 | 0.53 | 35.0 | 3.58e-01 | 86.6% | 67.5% |
| 1l3aA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.53 | 42.0 | 3.34e-01 | 100.0% | 42.2% |
| 1z6bA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 43.0 | 3.62e-01 | 90.2% | 91.5% |
| 2wkcB00 | 2.40.50.400 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Lactococcus phage single-stranded DNA binding protein | 0.53 | 36.0 | 3.56e-01 | 72.0% | 97.8% |
| 4f3lA03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 40.0 | 3.60e-01 | 100.0% | 57.4% |
| 4z9cB00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 39.0 | 3.49e-01 | 80.5% | 100.0% |
| 2a74A05 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.51 | 36.0 | 3.33e-01 | 73.2% | 66.7% |
| 2vl6A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 41.0 | 3.76e-01 | 89.0% | 98.2% |
| 3cfuA00 | 2.60.40.1240 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 43.0 | 3.67e-01 | 98.8% | 95.8% |
| 1dpgA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.50 | 34.0 | 2.33e-01 | 70.7% | 55.0% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3923898 | 377.1.2.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger | 0.83 | 51.0 | 5.20e-01 | 93.9% | 63.7% |
| 3487738 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.82 | 48.0 | 6.07e-01 | 78.0% | 96.0% |
| 4981234 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.81 | 51.0 | 5.71e-01 | 86.6% | 81.5% |
| 4936660 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.79 | 51.0 | 6.16e-01 | 75.6% | 100.0% |
| 3541586 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.78 | 51.0 | 5.32e-01 | 86.6% | 72.0% |
| 4965857 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.78 | 60.0 | 6.54e-01 | 81.7% | 97.1% |
| 3889754 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.77 | 49.0 | 5.67e-01 | 85.4% | 88.3% |
| 5034811 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.77 | 54.0 | 6.26e-01 | 79.3% | 100.0% |
| 3549345 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.76 | 47.0 | 5.40e-01 | 82.9% | 85.0% |
| 3513068 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.74 | 46.0 | 5.09e-01 | 82.9% | 78.5% |
| 3990333 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.74 | 47.0 | 4.93e-01 | 85.4% | 70.7% |
| 3865409 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.74 | 51.0 | 5.85e-01 | 100.0% | 98.3% |
| 4927266 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.68 | 48.0 | 3.97e-01 | 74.4% | 87.2% |
| 3960870 | 222.1.1.9 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydrat_N | 0.67 | 47.0 | 3.82e-01 | 74.4% | 78.8% |
| 4110452 | 222.1.1.9 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydrat_N | 0.63 | 52.0 | 4.15e-01 | 91.5% | 78.8% |
| 4285739 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.62 | 49.0 | 5.19e-01 | 90.2% | 93.2% |
| 4606510 | 4263.2.1.0 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain | 0.62 | 41.0 | 4.12e-01 | 84.1% | 65.9% |
| 3701091 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 47.0 | 3.83e-01 | 85.4% | 58.7% |
| 3940300 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.59 | 35.0 | 2.83e-01 | 84.1% | 29.7% |
| 3941388 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.59 | 36.0 | 3.00e-01 | 85.4% | 35.0% |
| 1513088 | 222.1.1.9 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydrat_N | 0.58 | 48.0 | 3.63e-01 | 90.2% | 90.6% |
| None | — | 0.58 | 36.0 | 3.19e-01 | 85.4% | 43.5% | |
| 3697700 | 7501.1.1.1 ↗ | a/b three-layered sandwiches › Dihydrofolate reductases › Dihydrofolate reductases › Dihydrofolate reductases › DHFR_1 | 0.58 | 50.0 | 3.47e-01 | 100.0% | 46.2% |
| 5071182 | 222.1.1.1 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydratas | 0.58 | 44.0 | 3.82e-01 | 84.1% | 90.2% |
| 3500665 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.57 | 34.0 | 3.32e-01 | 84.1% | 51.6% |
| 4505855 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 40.0 | 3.51e-01 | 73.2% | 78.3% |
| 5075191 | 222.1.1.1 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydratas | 0.56 | 44.0 | 3.49e-01 | 84.1% | 92.4% |
| 3791256 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.56 | 35.0 | 3.17e-01 | 85.4% | 45.5% |
| 3928388 | 633.33.1.1 ↗ | alpha bundles › Bromodomain-like › Rogdi › Rogdi › Rogdi_lz | 0.56 | 40.0 | 2.95e-01 | 89.0% | 28.4% |
| 3689291 | 220.1.1.69 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Meiotic_rec114 | 0.56 | 39.0 | 3.13e-01 | 95.1% | 38.1% |
| 5048849 | 222.1.1.1 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydratas | 0.56 | 46.0 | 3.77e-01 | 91.5% | 92.3% |
| 5044050 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.56 | 41.0 | 3.32e-01 | 100.0% | 38.8% |
| 3629934 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.55 | 35.0 | 2.90e-01 | 84.1% | 36.6% |
| 3577548 | 331.12.1.0 ↗ | a+b two layers › TBP-like › YugN-like › YugN-like | 0.55 | 41.0 | 3.67e-01 | 87.8% | 57.5% |
| 3223224 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 37.0 | 3.56e-01 | 70.7% | 70.5% |
| 4018514 | 222.1.1.12 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH | 0.54 | 44.0 | 3.48e-01 | 91.5% | 76.1% |
| 3509891 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.54 | 47.0 | 3.07e-01 | 97.6% | 36.1% |
| 3904562 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.53 | 37.0 | 3.73e-01 | 82.9% | 73.8% |
| 3578264 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.52 | 34.0 | 3.10e-01 | 82.9% | 49.1% |
| 5037168 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.52 | 41.0 | 3.66e-01 | 89.0% | 93.6% |
| 3997968 | 5.1.5.128 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_NUP159_NUP214 | 0.52 | 42.0 | 3.02e-01 | 93.9% | 96.4% |
| 3505751 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.51 | 33.0 | 3.11e-01 | 84.1% | 51.4% |
| 3592295 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.51 | 36.0 | 2.93e-01 | 84.1% | 38.1% |
| 4172287 | 4237.1.1.1 ↗ | beta barrels › FomD-like › FomD-like › FomD-like › DUF402 | 0.50 | 41.0 | 3.31e-01 | 90.2% | 51.5% |