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IMGVR_UViG_3300028994_000010-3300028994-Ga0169583_10051917
Arc-VirIMGVR_UViG_3300028994_000010-3300028994-Ga0169583_10051917
Identity
- Kingdom:
- archaea
Quality
71.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 54-127
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5zyrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 42.0 | 3.32e-01 | 87.8% | 33.1% |
| 2fsjA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.57 | 38.0 | 3.17e-01 | 100.0% | 37.0% |
| 4xhpA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 45.0 | 3.48e-01 | 90.5% | 46.7% |
| 6h9dA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.54 | 40.0 | 3.34e-01 | 82.4% | 94.6% |
| 2fnqA02 | 1.20.245.10 | Mainly Alpha › Up-down Bundle › Lipoxygenase-1; domain 5 › Lipoxygenase-1; Domain 5 | 0.54 | 46.0 | 2.89e-01 | 97.3% | 30.5% |
| 3ar4A04 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.51 | 43.0 | 3.12e-01 | 98.6% | 95.9% |
| 1kf6C00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.51 | 38.0 | 3.14e-01 | 90.5% | 44.6% |
| 3r4iA02 | 6.10.140.960 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 32.0 | 3.55e-01 | 87.8% | 80.0% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2496734 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 43.0 | 3.38e-01 | 89.2% | 33.1% |
| 5077504 | 3239.1.1.1 ↗ | alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 | 0.62 | 51.0 | 3.32e-01 | 90.5% | 63.4% |
| 4953300 | 101.1.2.728 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF31122 | 0.60 | 43.0 | 3.87e-01 | 75.7% | 96.2% |
| 4953298 | 101.1.2.934 ↗ | alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N | 0.56 | 40.0 | 3.43e-01 | 77.0% | 75.4% |
| 4992785 | 101.1.2.222 ↗ | alpha arrays › HTH › HTH › winged helix domain › PH0730-like_N | 0.54 | 41.0 | 3.74e-01 | 85.1% | 85.7% |
| 3602833 | 2004.1.1.46 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM | 0.54 | 44.0 | 3.04e-01 | 94.6% | 54.5% |
| 3814043 | 101.1.10.21 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N,Cyclin_C | 0.53 | 42.0 | 2.98e-01 | 91.9% | 67.9% |
| 4601008 | 101.1.2.728 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF31122 | 0.51 | 39.0 | 3.45e-01 | 82.4% | 81.8% |
| 3284427 | 1031.1.1.1 ↗ | a+b complex topology › Rifampin phosphotransferase RPH-Lm middle domain › Rifampin phosphotransferase RPH-Lm middle domain › Rifampin phosphotransferase RPH-Lm middle domain › Rph_4th | 0.51 | 43.0 | 2.79e-01 | 98.6% | 92.4% |
| 4181610 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 34.0 | 2.97e-01 | 100.0% | 46.1% |