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IMGVR_UViG_3300028994_000010-3300028994-Ga0169583_10051933
Arc-VirIMGVR_UViG_3300028994_000010-3300028994-Ga0169583_10051933
Identity
- Kingdom:
- archaea
Quality
76.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-129
Domain cluster:
rep: SRR1747059_scaffold_22_prodigal-single.1__X__X__00077__D2-29_67-126
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lrrA00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.67 | 30.0 | 3.71e-01 | 89.6% | 67.1% |
| 3onqA02 | 3.30.70.2730 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 31.0 | 3.67e-01 | 80.0% | 63.0% |
| 1yj7B01 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.62 | 27.0 | 3.34e-01 | 83.5% | 63.4% |
| 2jheA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 28.0 | 3.32e-01 | 92.2% | 59.3% |
| 2dt9A01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.61 | 32.0 | 3.92e-01 | 96.5% | 78.4% |
| 3afgB01 | 3.30.70.80 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 | 0.61 | 33.0 | 3.75e-01 | 100.0% | 70.1% |
| 5w2fA01 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.58 | 32.0 | 3.61e-01 | 96.5% | 69.8% |
| 6u9hF02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.58 | 25.0 | 3.03e-01 | 88.7% | 58.4% |
| 1dq3A03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.58 | 34.0 | 3.77e-01 | 98.3% | 73.6% |
| 2anrA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.57 | 29.0 | 3.46e-01 | 80.9% | 72.0% |
| 3c0wA02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.56 | 33.0 | 3.44e-01 | 96.5% | 62.1% |
| 2yweA04 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 28.0 | 2.84e-01 | 93.0% | 47.4% |
| 3ofgB00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.53 | 30.0 | 3.31e-01 | 80.0% | 70.1% |
| 3hz7A00 | 3.30.110.40 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain | 0.52 | 31.0 | 3.79e-01 | 98.3% | 94.5% |
| 5flmA02 | 3.30.1360.140 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.51 | 38.0 | 3.69e-01 | 96.5% | 68.4% |
| 2jt1A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 27.0 | 3.19e-01 | 97.4% | 78.9% |
| 1cpyA02 | 1.10.287.410 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.50 | 29.0 | 3.42e-01 | 85.2% | 87.5% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3388102 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.75 | 32.0 | 4.14e-01 | 79.1% | 69.2% |
| 3708065 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.70 | 30.0 | 3.71e-01 | 79.1% | 61.6% |
| 5060689 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.65 | 30.0 | 4.01e-01 | 88.7% | 83.3% |
| 5082025 | 304.8.1.10 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 | 0.63 | 31.0 | 3.78e-01 | 81.7% | 72.0% |
| 5033078 | 304.8.1.10 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 | 0.63 | 31.0 | 3.79e-01 | 80.9% | 74.3% |
| 4939665 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.62 | 30.0 | 3.67e-01 | 77.4% | 69.3% |
| 4046004 | 304.8.1.21 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 | 0.62 | 29.0 | 3.75e-01 | 80.0% | 78.5% |
| 5050933 | 304.8.1.21 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 | 0.61 | 31.0 | 3.68e-01 | 80.9% | 70.0% |
| 5025550 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.61 | 30.0 | 3.84e-01 | 79.1% | 82.8% |
| 4387157 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.61 | 32.0 | 3.87e-01 | 98.3% | 75.0% |
| 5075587 | 304.8.1.10 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 | 0.61 | 30.0 | 3.57e-01 | 95.7% | 67.5% |
| 5025962 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 31.0 | 3.63e-01 | 96.5% | 70.0% |
| 3524888 | 304.8.1.10 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 | 0.60 | 32.0 | 3.84e-01 | 82.6% | 81.4% |
| 3587825 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.59 | 29.0 | 3.51e-01 | 80.0% | 70.7% |
| 3250910 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.57 | 30.0 | 3.84e-01 | 95.7% | 85.7% |
| 4228350 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.56 | 30.0 | 3.89e-01 | 95.7% | 92.3% |
| 4986893 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.55 | 32.0 | 3.95e-01 | 98.3% | 90.7% |
| 4608678 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.54 | 30.0 | 3.57e-01 | 95.7% | 78.8% |
| 4937023 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.54 | 32.0 | 3.39e-01 | 97.4% | 66.0% |
| 3970617 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.54 | 32.0 | 3.87e-01 | 98.3% | 90.7% |
| 5012030 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.54 | 31.0 | 3.85e-01 | 97.4% | 94.3% |
| 3575847 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.53 | 30.0 | 3.03e-01 | 75.7% | 53.9% |
| 4994004 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.53 | 32.0 | 3.81e-01 | 98.3% | 92.0% |
| 3171981 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.52 | 36.0 | 3.63e-01 | 100.0% | 69.9% |
| 3550303 | 12.5.1.4 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › Nucleoporin2 | 0.52 | 43.0 | 3.90e-01 | 90.4% | 86.9% |
| 3616815 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.52 | 28.0 | 3.61e-01 | 80.0% | 98.3% |
| 4987072 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.52 | 33.0 | 3.98e-01 | 84.3% | 94.9% |
| 4945580 | 328.5.1.0 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like | 0.52 | 34.0 | 4.02e-01 | 85.2% | 96.2% |
| 4929225 | 304.8.1.10 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 | 0.52 | 45.0 | 4.17e-01 | 96.5% | 80.7% |
| 5010185 | 328.5.1.0 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like | 0.50 | 29.0 | 3.63e-01 | 98.3% | 94.3% |
| 4225320 | 306.3.1.4 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › PFF1_C | 0.50 | 29.0 | 3.03e-01 | 96.5% | 59.0% |