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IMGVR_UViG_3300029202_000224-3300029202-Ga0167843_1015388
Arc-VirIMGVR_UViG_3300029202_000224-3300029202-Ga0167843_1015388
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 22-88
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zq1A01 | 2.30.30.520 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 49.0 | 4.73e-01 | 95.5% | 67.5% |
| 2hq9B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.63 | 55.0 | 4.42e-01 | 100.0% | 64.2% |
| 5escA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 52.0 | 4.42e-01 | 100.0% | 60.5% |
| 3ec6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 51.0 | 4.31e-01 | 100.0% | 60.2% |
| 3gdiA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.60 | 53.0 | 4.49e-01 | 100.0% | 81.1% |
| 2lccA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 37.0 | 3.59e-01 | 80.6% | 56.6% |
| 1p97A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 47.0 | 4.03e-01 | 100.0% | 86.8% |
| 3kf8A00 | 2.40.50.1040 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 44.0 | 3.09e-01 | 89.6% | 59.4% |
| 4dj3B01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 46.0 | 3.96e-01 | 100.0% | 85.6% |
| 2ok5A02 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.52 | 42.0 | 3.08e-01 | 97.0% | 54.3% |
| 2z13A00 | 2.30.29.170 | Mainly Beta › Roll › PH-domain like › | 0.51 | 32.0 | 2.68e-01 | 74.6% | 35.0% |
| 2gefA01 | 2.30.42.30 | Mainly Beta › Roll › Pdz3 Domain › | 0.51 | 35.0 | 3.05e-01 | 74.6% | 75.0% |
| 6wo0A01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.50 | 43.0 | 3.10e-01 | 100.0% | 53.5% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5060038 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.63 | 52.0 | 4.28e-01 | 88.1% | 82.6% |
| 4983682 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.58 | 50.0 | 4.02e-01 | 100.0% | 63.6% |
| 3502540 | 1.1.1.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › DUF1758 | 0.58 | 39.0 | 3.56e-01 | 70.1% | 80.0% |
| 3409552 | 60.1.1.2 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › Med25 | 0.57 | 40.0 | 3.25e-01 | 100.0% | 35.2% |
| 3788285 | 395.1.1.4 ↗ | few secondary structure elements › Midkine-related › Midkine-related › Midkine-related › Flocculin_t3 | 0.55 | 37.0 | 4.23e-01 | 74.6% | 94.0% |
| 3698699 | 5090.1.1.7 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › HAP2-GCS1 | 0.54 | 38.0 | 2.44e-01 | 74.6% | 97.8% |
| 1914574 | 3488.1.1.3 ↗ | a+b three layers › Putative sensor histidine kinase domain › Putative sensor histidine kinase domain › Putative sensor histidine kinase domain › PF30670 | 0.54 | 46.0 | 3.67e-01 | 98.5% | 80.7% |
| 4319690 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.54 | 46.0 | 3.93e-01 | 100.0% | 78.3% |
| 4943531 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.54 | 46.0 | 3.90e-01 | 100.0% | 86.7% |
| 2418837 | 3880.1.1.2 ↗ | beta barrels › Glycoside hydrolase family 127 C-terminal domain › Glycoside hydrolase family 127 C-terminal domain › Glycoside hydrolase family 127 C-terminal domain › Glyco_hydro127C | 0.53 | 40.0 | 3.20e-01 | 82.1% | 64.8% |
| 3204756 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.53 | 37.0 | 2.43e-01 | 74.6% | 73.8% |
| 3577579 | 1.1.1.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › DUF1758 | 0.53 | 37.0 | 2.87e-01 | 74.6% | 77.4% |
| 3220380 | 212.1.1.32 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › ChlI | 0.52 | 37.0 | 2.90e-01 | 74.6% | 54.0% |
| 3877917 | 223.1.1.98 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PF30670 | 0.52 | 44.0 | 3.59e-01 | 100.0% | 72.1% |
| 3365246 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.52 | 43.0 | 3.31e-01 | 95.5% | 45.3% |
| 3276560 | 4023.1.1.0 ↗ | a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core | 0.51 | 43.0 | 3.80e-01 | 94.0% | 89.0% |
| 3579212 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.51 | 42.0 | 3.58e-01 | 97.0% | 56.2% |
| 3687519 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.51 | 41.0 | 3.74e-01 | 92.5% | 76.8% |
| 3509026 | 1.1.1.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › DUF1758 | 0.51 | 43.0 | 3.35e-01 | 100.0% | 68.8% |
| 3489060 | 223.1.1.98 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PF30670 | 0.51 | 42.0 | 3.73e-01 | 100.0% | 87.3% |
| 5052847 | 246.1.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase | 0.51 | 37.0 | 2.52e-01 | 97.0% | 20.8% |
| 3907178 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 43.0 | 3.79e-01 | 98.5% | 64.8% |
| 5054152 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.50 | 41.0 | 3.44e-01 | 94.0% | 52.8% |
| 3736603 | 7.1.1.4 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › GRASP55_65 | 0.50 | 41.0 | 3.72e-01 | 92.5% | 76.8% |
| 3212189 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.50 | 38.0 | 3.24e-01 | 89.6% | 48.7% |