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IMGVR_UViG_3300029221_000043-3300029221-Ga0168075_1038499

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300029221_000043-3300029221-Ga0168075_1038499 ↗
Kingdom:: archaea

Quality

70.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-99

PDB

Domain cluster: representative

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02892.22 best	zf-BED	20.9	4.00e-04	48.2%	68.2%
PF13894.13	zf-C2H2_4	21.3	4.50e-04	28.2%	95.8%
PF00096.33	zf-C2H2	21.5	3.40e-04	28.2%	95.7%

CATH (14)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1zv1A00	1.10.8.10	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain	0.60	30.0	3.54e-01	77.6%	69.5%
2ivxB01	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.56	48.0	4.11e-01	96.5%	72.1%
2w96A02	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.53	46.0	4.22e-01	96.5%	76.1%
1w98B02	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.53	46.0	4.19e-01	96.5%	76.3%
4rocA01	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.52	45.0	4.24e-01	96.5%	85.4%
5xs2B02	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.52	46.0	3.94e-01	96.5%	73.5%
1zp2A02	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.52	45.0	4.13e-01	96.5%	82.1%
2i53A01	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.52	44.0	3.73e-01	94.1%	62.9%
2f2cA01	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.52	45.0	4.15e-01	96.5%	76.1%
3h4cA01	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.51	44.0	4.27e-01	96.5%	88.5%
2fbkA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.51	35.0	2.91e-01	72.9%	39.1%
1e91A00	1.20.1160.11	Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix	0.51	41.0	4.12e-01	100.0%	89.4%
2felA00	1.20.200.10	Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain)	0.50	39.0	2.66e-01	85.9%	80.4%
2cshA01	3.30.160.60	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger	0.50	35.0	3.47e-01	75.3%	68.9%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3955218	632.2.1.17 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › DUF1707	0.57	31.0	4.01e-01	95.3%	100.0%
3810077	310.2.1.0 ↗	a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF	0.55	38.0	3.16e-01	70.6%	88.4%
5064398	101.1.10.3 ↗	alpha arrays › HTH › HTH › Cyclin-like › TFIIB	0.54	47.0	4.48e-01	96.5%	83.0%
3686477	509.1.1.0 ↗	alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain	0.54	41.0	4.35e-01	100.0%	94.7%
3494721	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.54	37.0	4.15e-01	97.6%	95.4%
4116680	1037.1.1.1 ↗	alpha bundles › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › LGT	0.53	47.0	3.26e-01	97.6%	70.9%
4030134	101.1.10.3 ↗	alpha arrays › HTH › HTH › Cyclin-like › TFIIB	0.52	45.0	3.88e-01	96.5%	64.4%