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IMGVR_UViG_3300029267_002151-3300029267-Ga0310068_100093924
Arc-VirIMGVR_UViG_3300029267_002151-3300029267-Ga0310068_100093924
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-86
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pp6A02 | 2.40.10.210 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins (gpFII-like) | 0.78 | 48.0 | 5.04e-01 | 95.8% | 69.8% |
| 1ep5A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.69 | 46.0 | 4.34e-01 | 97.2% | 57.0% |
| 3ttgA00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.68 | 46.0 | 2.95e-01 | 100.0% | 14.8% |
| 3kewA01 | 2.40.30.130 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.68 | 45.0 | 4.29e-01 | 100.0% | 58.3% |
| 2nwaA01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.67 | 47.0 | 4.63e-01 | 100.0% | 69.3% |
| 2ey4D00 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.66 | 45.0 | 4.44e-01 | 100.0% | 66.7% |
| 1a1rA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.66 | 46.0 | 4.34e-01 | 97.2% | 61.2% |
| 3u28C00 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.65 | 46.0 | 4.27e-01 | 100.0% | 57.6% |
| 6f2mA02 | 2.40.30.290 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.65 | 46.0 | 4.31e-01 | 100.0% | 59.8% |
| 2dyiA02 | 2.30.30.240 | Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain | 0.65 | 40.0 | 4.03e-01 | 83.1% | 60.6% |
| 2rdeA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.62 | 51.0 | 4.34e-01 | 100.0% | 55.9% |
| 2esrA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.61 | 41.0 | 3.21e-01 | 94.4% | 31.2% |
| 2dyiA01 | 2.40.30.60 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM | 0.61 | 42.0 | 4.03e-01 | 98.6% | 61.9% |
| 4d10F01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.61 | 49.0 | 3.79e-01 | 93.0% | 73.7% |
| 1c5eA00 | 2.40.300.10 | Mainly Beta › Beta Barrel › Virus Head Decoration Protein; Chain: A, › Head decoration protein D | 0.60 | 54.0 | 4.88e-01 | 98.6% | 89.5% |
| 2sfaA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.59 | 39.0 | 3.67e-01 | 100.0% | 53.8% |
| 4xhyA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 53.0 | 4.01e-01 | 100.0% | 56.5% |
| 1xg9A02 | 3.10.25.20 | Alpha Beta › Roll › Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2 › | 0.58 | 41.0 | 4.34e-01 | 88.7% | 85.5% |
| 1rz1A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 52.0 | 4.03e-01 | 100.0% | 59.2% |
| 2f1lA01 | 2.40.30.60 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM | 0.58 | 44.0 | 4.14e-01 | 98.6% | 66.3% |
| 4l82A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 51.0 | 3.98e-01 | 100.0% | 59.6% |
| 2r6vA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 51.0 | 3.89e-01 | 100.0% | 58.5% |
| 1i0rA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 51.0 | 3.90e-01 | 100.0% | 59.6% |
| 4f07E00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 50.0 | 3.94e-01 | 100.0% | 59.1% |
| 3bnkA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 49.0 | 3.65e-01 | 100.0% | 51.6% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.56 | 49.0 | 4.10e-01 | 100.0% | 57.4% |
| 2qckA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 49.0 | 3.86e-01 | 100.0% | 60.3% |
| 2d37A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 49.0 | 3.84e-01 | 100.0% | 58.7% |
| 2ynaA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 46.0 | 4.28e-01 | 98.6% | 75.0% |
| 2cxiA01 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.54 | 42.0 | 4.12e-01 | 100.0% | 77.2% |
| 3pftA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 47.0 | 3.69e-01 | 100.0% | 59.0% |
| 2g6vA02 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.53 | 36.0 | 2.56e-01 | 70.4% | 87.4% |
| 2d8bA01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.53 | 42.0 | 3.52e-01 | 93.0% | 85.0% |
| 3b5mA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 46.0 | 3.95e-01 | 100.0% | 65.5% |
| 1xqbA01 | 2.40.30.70 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like | 0.51 | 44.0 | 3.88e-01 | 100.0% | 66.1% |
| 4nzrM03 | 3.30.110.180 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › | 0.51 | 41.0 | 3.45e-01 | 88.7% | 69.9% |
| 1uscA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 42.0 | 3.31e-01 | 100.0% | 62.4% |
| 1hqz800 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.50 | 42.0 | 3.53e-01 | 95.8% | 88.6% |
ECOD (65)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3975275 | 1.1.13.15 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Gifsy-2 | 0.77 | 48.0 | 4.35e-01 | 97.2% | 47.4% |
| 3963908 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.77 | 48.0 | 4.90e-01 | 100.0% | 64.3% |
| 2559744 | 70.4.1.2 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › Phage_head_fibr | 0.74 | 52.0 | 5.62e-01 | 97.2% | 88.1% |
| 3483841 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.71 | 49.0 | 4.32e-01 | 100.0% | 49.5% |
| 5010595 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.71 | 51.0 | 4.82e-01 | 100.0% | 63.5% |
| 4409090 | 1.1.8.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › YgfZ_barrel | 0.71 | 51.0 | 5.01e-01 | 100.0% | 70.7% |
| 3959311 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.70 | 47.0 | 4.26e-01 | 100.0% | 51.6% |
| 3957158 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.69 | 46.0 | 4.07e-01 | 100.0% | 46.7% |
| 3956627 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.69 | 45.0 | 3.65e-01 | 100.0% | 34.3% |
| 3602200 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 45.0 | 4.61e-01 | 100.0% | 68.6% |
| 1213522 | 1.1.13.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DTP-pb9_B-dom | 0.69 | 45.0 | 4.24e-01 | 94.4% | 55.2% |
| 5079595 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.69 | 49.0 | 4.45e-01 | 100.0% | 55.8% |
| 4026390 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 49.0 | 3.96e-01 | 100.0% | 40.0% |
| 5059785 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 47.0 | 4.58e-01 | 100.0% | 65.0% |
| 4933363 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.68 | 45.0 | 4.44e-01 | 100.0% | 64.9% |
| 5002644 | 70.4.1.0 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) | 0.68 | 60.0 | 5.92e-01 | 97.2% | 96.0% |
| 4926946 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.67 | 48.0 | 4.56e-01 | 100.0% | 63.5% |
| 5035997 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 44.0 | 4.44e-01 | 100.0% | 68.6% |
| 5051893 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.66 | 47.0 | 4.60e-01 | 100.0% | 67.5% |
| 4969578 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 45.0 | 4.52e-01 | 100.0% | 68.9% |
| 4976800 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.66 | 46.0 | 4.27e-01 | 98.6% | 57.8% |
| 4991129 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 44.0 | 4.17e-01 | 100.0% | 58.3% |
| 5036479 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.65 | 46.0 | 4.00e-01 | 98.6% | 48.2% |
| 3982061 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.65 | 45.0 | 3.78e-01 | 100.0% | 41.6% |
| 4316037 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.64 | 48.0 | 4.12e-01 | 100.0% | 50.9% |
| 5077063 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.64 | 44.0 | 4.38e-01 | 100.0% | 68.0% |
| 2869319 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.64 | 47.0 | 4.22e-01 | 100.0% | 56.1% |
| 4964309 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.64 | 45.0 | 4.53e-01 | 100.0% | 71.6% |
| 5036581 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.64 | 45.0 | 4.00e-01 | 98.6% | 52.0% |
| 5041953 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 46.0 | 4.90e-01 | 100.0% | 88.3% |
| 5074238 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 44.0 | 4.41e-01 | 100.0% | 69.3% |
| 4987864 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.64 | 45.0 | 4.45e-01 | 100.0% | 70.7% |
| 5038467 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 44.0 | 4.30e-01 | 100.0% | 65.8% |
| 5041607 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 44.0 | 4.35e-01 | 100.0% | 68.9% |
| 5017568 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.63 | 45.0 | 4.40e-01 | 100.0% | 67.5% |
| 3407383 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.63 | 47.0 | 3.15e-01 | 98.6% | 21.6% |
| 4327412 | 1.1.8.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › YgfZ_barrel | 0.63 | 49.0 | 4.69e-01 | 100.0% | 73.8% |
| 4500974 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.63 | 48.0 | 4.01e-01 | 100.0% | 48.3% |
| 3272018 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.61 | 45.0 | 4.02e-01 | 100.0% | 55.3% |
| 4214150 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.61 | 45.0 | 3.93e-01 | 100.0% | 51.8% |
| 4048591 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.60 | 46.0 | 4.36e-01 | 100.0% | 69.4% |
| 3585229 | 50.1.1.2 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S77 | 0.60 | 53.0 | 4.27e-01 | 100.0% | 61.4% |
| 5012991 | 1.1.9.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF473 | 0.60 | 54.0 | 4.46e-01 | 97.2% | 100.0% |
| 5002426 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.60 | 47.0 | 4.43e-01 | 100.0% | 70.6% |
| 4939469 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.60 | 47.0 | 4.28e-01 | 100.0% | 64.2% |
| 3387073 | 1.1.5.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › MreC | 0.59 | 49.0 | 3.54e-01 | 100.0% | 32.2% |
| 4040332 | 101.1.9.20 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › PhetRS_B1 | 0.59 | 43.0 | 4.14e-01 | 100.0% | 68.8% |
| 4960055 | 1.1.16.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain | 0.58 | 51.0 | 4.14e-01 | 100.0% | 64.5% |
| 4600482 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.58 | 52.0 | 3.93e-01 | 100.0% | 54.5% |
| 3961532 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.57 | 51.0 | 4.40e-01 | 98.6% | 84.5% |
| 4267752 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.57 | 46.0 | 4.19e-01 | 98.6% | 65.3% |
| 5083920 | 50.1.1.0 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin | 0.57 | 50.0 | 4.05e-01 | 100.0% | 54.3% |
| 4564083 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.57 | 51.0 | 3.53e-01 | 100.0% | 65.8% |
| 1217791 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.57 | 51.0 | 3.83e-01 | 100.0% | 52.0% |
| 3611250 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.56 | 50.0 | 3.97e-01 | 100.0% | 70.3% |
| 4382946 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.56 | 50.0 | 3.56e-01 | 98.6% | 51.6% |
| 4930482 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.55 | 49.0 | 4.09e-01 | 100.0% | 63.2% |
| 3964426 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.54 | 47.0 | 3.98e-01 | 100.0% | 57.5% |
| 3963042 | 304.102.1.0 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase | 0.54 | 44.0 | 3.08e-01 | 100.0% | 28.0% |
| 1108188 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.53 | 47.0 | 3.91e-01 | 100.0% | 72.2% |
| 5048051 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.53 | 44.0 | 4.12e-01 | 100.0% | 73.0% |
| 5010878 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 43.0 | 3.78e-01 | 100.0% | 60.0% |
| 3707346 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 39.0 | 3.73e-01 | 87.3% | 69.9% |
| 4132820 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.51 | 45.0 | 3.99e-01 | 100.0% | 68.6% |
| 4636051 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.51 | 45.0 | 3.96e-01 | 98.6% | 68.6% |
D2
high
residues 92-148
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gqhA01 | 2.40.300.10 | Mainly Beta › Beta Barrel › Virus Head Decoration Protein; Chain: A, › Head decoration protein D | 0.79 | 67.0 | 5.12e-01 | 93.0% | 42.3% |
| 6xgqb01 | 2.40.300.10 | Mainly Beta › Beta Barrel › Virus Head Decoration Protein; Chain: A, › Head decoration protein D | 0.76 | 64.0 | 5.36e-01 | 91.2% | 63.4% |
| 1g8lA04 | 2.40.340.10 | Mainly Beta › Beta Barrel › Beta-clip › MoeA, C-terminal, domain IV | 0.67 | 53.0 | 4.97e-01 | 91.2% | 100.0% |
| 8bveA03 | 2.40.340.10 | Mainly Beta › Beta Barrel › Beta-clip › MoeA, C-terminal, domain IV | 0.62 | 48.0 | 4.54e-01 | 87.7% | 98.6% |
| 4tkoB02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.62 | 51.0 | 4.88e-01 | 91.2% | 98.5% |
| 2w5eA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.60 | 41.0 | 3.94e-01 | 91.2% | 63.1% |
| 4rcnB02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.59 | 49.0 | 4.46e-01 | 93.0% | 92.2% |
| 3otpA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.59 | 43.0 | 2.95e-01 | 94.7% | 22.2% |
| 1ep3B01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 47.0 | 3.97e-01 | 94.7% | 52.5% |
| 2m5sA00 | 2.40.30.240 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.58 | 48.0 | 3.74e-01 | 93.0% | 45.2% |
| 2wzpR01 | 2.30.300.20 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Phage tail base-plate attachment protein, domain D1/D2 | 0.57 | 52.0 | 3.54e-01 | 100.0% | 51.0% |
| 1gjxA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.57 | 47.0 | 4.23e-01 | 93.0% | 93.8% |
| 1m9sA03 | 2.30.30.170 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 37.0 | 3.47e-01 | 70.2% | 74.7% |
| 1fx0B01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.55 | 43.0 | 3.92e-01 | 91.2% | 63.3% |
| 4g7wA00 | 2.40.30.280 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Vibrio phage CTXphi pIII, N-terminal N1 domain | 0.54 | 47.0 | 3.94e-01 | 98.2% | 57.1% |
| 3cp7B02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 45.0 | 3.77e-01 | 100.0% | 82.9% |
| 3k6yA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 45.0 | 3.69e-01 | 98.2% | 86.9% |
| 2bkoA02 | 3.30.70.1450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain | 0.52 | 43.0 | 3.90e-01 | 94.7% | 75.3% |
| 1z6hA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.51 | 39.0 | 3.70e-01 | 89.5% | 93.1% |
| 4pz7A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 39.0 | 3.11e-01 | 93.0% | 66.4% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3602932 | 70.4.1.0 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) | 0.82 | 63.0 | 6.75e-01 | 84.2% | 95.9% |
| 2559744 | 70.4.1.2 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › Phage_head_fibr | 0.81 | 67.0 | 6.69e-01 | 91.2% | 86.4% |
| 5002645 | 70.4.1.0 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) | 0.75 | 61.0 | 6.07e-01 | 89.5% | 94.9% |
| 5083817 | 70.4.1.0 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) | 0.73 | 60.0 | 5.82e-01 | 91.2% | 100.0% |
| 5016125 | 70.4.1.0 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) | 0.67 | 57.0 | 5.77e-01 | 93.0% | 98.2% |
| 5022524 | 70.4.1.0 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) | 0.66 | 57.0 | 5.34e-01 | 96.5% | 82.9% |
| 5005052 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.65 | 54.0 | 5.58e-01 | 91.2% | 92.7% |
| 4215822 | 1.1.8.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › YgfZ_barrel | 0.62 | 50.0 | 4.68e-01 | 93.0% | 71.4% |
| 4930536 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.62 | 52.0 | 4.87e-01 | 93.0% | 100.0% |
| 4333314 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.59 | 48.0 | 4.62e-01 | 91.2% | 96.9% |
| 4053143 | 1.1.5.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S7 | 0.56 | 41.0 | 3.34e-01 | 94.7% | 38.3% |
| 3654499 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.56 | 40.0 | 3.19e-01 | 93.0% | 35.2% |
| 5063379 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.54 | 48.0 | 3.37e-01 | 100.0% | 72.8% |
| 4128441 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.54 | 43.0 | 4.29e-01 | 93.0% | 93.3% |
| 140973 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.52 | 46.0 | 3.06e-01 | 100.0% | 65.2% |
| 4162917 | 304.102.1.1 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 | 0.52 | 41.0 | 2.76e-01 | 91.2% | 36.1% |
| 5016214 | 304.102.1.1 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 | 0.52 | 41.0 | 2.79e-01 | 89.5% | 45.9% |
| 3448643 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.51 | 44.0 | 3.07e-01 | 100.0% | 74.6% |
| 4499041 | 1.1.5.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Mycop_pep_DUF31 | 0.51 | 43.0 | 3.03e-01 | 100.0% | 70.2% |