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IMGVR_UViG_3300029267_002151-3300029267-Ga0310068_100093934

Arc-Vir

IMGVR_UViG_3300029267_002151-3300029267-Ga0310068_100093934

Identity

Kingdom:
archaea

Quality

90.0 mean pLDDT

Cluster

View cluster (33 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 37-145
PDB
Domain cluster: rep: HQ141411.1__ADW01302.1__X__00021__D31-144
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fryA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 27.0 3.30e-01 78.9% 70.3%
1hp7A01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.54 27.0 2.92e-01 83.5% 52.6%
5inwA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.53 28.0 2.83e-01 81.7% 46.3%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3264636 601.23.1.4 ↗ alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.65 50.0 3.49e-01 100.0% 26.7%
4155387 601.23.1.4 ↗ alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.63 46.0 3.28e-01 100.0% 26.2%
3670532 601.23.1.4 ↗ alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.62 45.0 3.22e-01 100.0% 25.8%
4569662 601.23.1.4 ↗ alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.56 44.0 3.24e-01 100.0% 30.0%
5060078 2484.1.1.291 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_V 0.56 39.0 2.42e-01 100.0% 11.5%
3462691 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.56 31.0 3.68e-01 81.7% 86.2%
4969654 601.23.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III 0.55 43.0 3.22e-01 100.0% 32.3%
4600010 601.23.1.4 ↗ alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.55 43.0 3.16e-01 100.0% 30.5%
4463557 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.54 35.0 3.69e-01 100.0% 74.7%
4962753 601.23.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III 0.53 42.0 3.09e-01 100.0% 31.0%
54696 601.23.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III 0.53 42.0 3.12e-01 100.0% 31.6%
4410759 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.53 35.0 3.52e-01 100.0% 65.2%
4636696 601.23.1.4 ↗ alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.53 41.0 3.05e-01 100.0% 30.5%
4109850 601.23.1.4 ↗ alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.52 41.0 3.07e-01 100.0% 31.3%
3187002 101.1.2.635 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1_C, PF26121 0.52 42.0 3.08e-01 88.1% 53.2%
4160947 601.23.1.4 ↗ alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.50 41.0 3.04e-01 100.0% 32.5%