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IMGVR_UViG_3300029267_002151-3300029267-Ga0310068_100093957
Arc-VirIMGVR_UViG_3300029267_002151-3300029267-Ga0310068_100093957
Identity
- Kingdom:
- archaea
Quality
91.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 35-108
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6cgvM01 | 1.20.120.1500 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pre-hexon-linking protein IIIa | 0.64 | 47.0 | 3.91e-01 | 78.4% | 97.0% |
| 1q6aA00 | 1.10.1240.30 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain | 0.62 | 53.0 | 4.78e-01 | 100.0% | 68.2% |
| 2h9dD00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.61 | 53.0 | 4.85e-01 | 100.0% | 82.0% |
| 3rmiA00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.61 | 53.0 | 4.74e-01 | 98.6% | 71.4% |
| 7c1iA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.61 | 46.0 | 4.22e-01 | 82.4% | 88.0% |
| 3s64A00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.59 | 48.0 | 4.67e-01 | 91.9% | 81.5% |
| 4nooB00 | 1.10.8.1160 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.59 | 43.0 | 3.93e-01 | 77.0% | 62.1% |
| 1sumB01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.56 | 47.0 | 4.18e-01 | 91.9% | 78.5% |
| 1zvuA03 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.56 | 43.0 | 3.56e-01 | 98.6% | 45.0% |
| 5t3wA00 | 1.20.120.1160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.54 | 43.0 | 3.59e-01 | 89.2% | 49.6% |
| 6ofsA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.53 | 44.0 | 3.29e-01 | 97.3% | 69.4% |
| 3tbiB02 | 6.10.140.1670 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 41.0 | 3.72e-01 | 82.4% | 77.0% |
| 2wgmA01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.52 | 35.0 | 3.38e-01 | 91.9% | 61.0% |
| 3of4A00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.51 | 42.0 | 3.12e-01 | 93.2% | 46.4% |
| 1w0bA01 | 1.20.58.420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP | 0.51 | 42.0 | 4.03e-01 | 95.9% | 82.6% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 39.0 | 3.64e-01 | 83.8% | 83.3% |
| 3nrkA01 | 1.10.4030.10 | Mainly Alpha › Orthogonal Bundle › Triger factor/SurA peptide-binding fold › Porin chaperone SurA, peptide-binding domain | 0.51 | 45.0 | 3.27e-01 | 98.6% | 46.5% |
| 2uuzB00 | 1.10.10.2020 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Host-nuclease inhibitor protein Gam | 0.50 | 39.0 | 3.75e-01 | 82.4% | 84.7% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.50 | 44.0 | 4.02e-01 | 100.0% | 100.0% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3505989 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.65 | 48.0 | 4.25e-01 | 82.4% | 55.2% |
| 3936293 | 198.1.1.3 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_1 | 0.64 | 51.0 | 4.76e-01 | 97.3% | 69.5% |
| 4086054 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.64 | 47.0 | 3.12e-01 | 98.6% | 19.3% |
| 3520309 | 198.1.1.1 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2 | 0.63 | 45.0 | 4.57e-01 | 82.4% | 76.0% |
| 3643621 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.62 | 46.0 | 4.54e-01 | 79.7% | 72.5% |
| 5052081 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 41.0 | 3.18e-01 | 79.7% | 30.9% |
| 3416035 | 104.1.1.0 ↗ | alpha duplicates or obligate multimers › TFIIA, alpha-helical domain › TFIIA, alpha-helical domain › TFIIA, alpha-helical domain | 0.61 | 43.0 | 4.97e-01 | 94.6% | 100.0% |
| 3361251 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.60 | 45.0 | 4.26e-01 | 81.1% | 65.6% |
| 3641386 | 198.1.1.3 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_1 | 0.60 | 44.0 | 4.27e-01 | 86.5% | 68.2% |
| 3437546 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.60 | 44.0 | 4.33e-01 | 79.7% | 72.5% |
| 4615565 | 101.1.1.249 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › SGIII | 0.59 | 44.0 | 4.23e-01 | 94.6% | 69.4% |
| 3516870 | 5094.1.1.0 ↗ | a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like | 0.58 | 43.0 | 3.80e-01 | 78.4% | 56.2% |
| 3643620 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.58 | 43.0 | 4.24e-01 | 82.4% | 75.0% |
| 4452821 | 101.1.2.604 ↗ | alpha arrays › HTH › HTH › winged helix domain › SGIII | 0.57 | 46.0 | 4.61e-01 | 100.0% | 89.3% |
| 3473557 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.56 | 42.0 | 4.19e-01 | 82.4% | 86.3% |
| 3218229 | 109.1.1.16 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_6 | 0.56 | 40.0 | 3.14e-01 | 82.4% | 34.5% |
| 3595457 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.55 | 39.0 | 3.66e-01 | 73.0% | 60.0% |
| 3222895 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.53 | 41.0 | 4.04e-01 | 83.8% | 77.5% |
| 4494455 | 192.5.1.34 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › MSP1_C | 0.53 | 44.0 | 4.02e-01 | 90.5% | 81.0% |
| 3930431 | 3065.1.1.0 ↗ | alpha bundles › Fatty acid- and retinoid-binding proteins › Fatty acid- and retinoid-binding proteins › Fatty acid- and retinoid-binding proteins | 0.52 | 39.0 | 3.62e-01 | 81.1% | 97.9% |
| 4503189 | 589.1.2.1 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › TF C-terminus (Pfam 05698) › Trigger_C | 0.52 | 40.0 | 3.07e-01 | 83.8% | 80.6% |
| 3973206 | 150.5.1.126 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › HisKA | 0.51 | 40.0 | 3.72e-01 | 86.5% | 70.5% |
| 4275996 | 589.1.2.1 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › TF C-terminus (Pfam 05698) › Trigger_C | 0.50 | 41.0 | 3.18e-01 | 90.5% | 86.5% |