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IMGVR_UViG_3300029267_002151-3300029267-Ga0310068_100093959
Arc-VirIMGVR_UViG_3300029267_002151-3300029267-Ga0310068_100093959
Identity
- Kingdom:
- archaea
Quality
91.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-129
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03013.20 best | Pyr_excise | 44.7 | 1.90e-11 | 50.8% | 79.0% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vvwA00 | 1.10.437.20 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus | 0.57 | 39.0 | 3.73e-01 | 79.8% | 58.7% |
| 1lp1A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.55 | 23.0 | 3.35e-01 | 80.6% | 87.3% |
| 1orsC00 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.53 | 36.0 | 3.56e-01 | 74.2% | 65.2% |
| 4dxwB01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.50 | 34.0 | 3.66e-01 | 70.2% | 81.7% |
| 3cbuA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.50 | 39.0 | 3.83e-01 | 83.1% | 76.9% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3588542 | 615.1.1.1 ↗ | alpha arrays › T4 endonuclease V › T4 endonuclease V › T4 endonuclease V › Pyr_excise | 0.97 | 84.0 | 8.76e-01 | 99.2% | 95.7% |
| 3486859 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.55 | 42.0 | 4.00e-01 | 81.5% | 90.0% |
| 3899734 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.54 | 37.0 | 4.12e-01 | 71.8% | 95.0% |
| 3216342 | 601.1.1.95 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › F_actin_bind | 0.54 | 37.0 | 3.83e-01 | 71.8% | 76.3% |
| 5076670 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.52 | 38.0 | 3.76e-01 | 77.4% | 70.4% |