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IMGVR_UViG_3300029267_002151-3300029267-Ga0310068_100093988

Arc-Vir

IMGVR_UViG_3300029267_002151-3300029267-Ga0310068_100093988

Quality

85.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-55
PDB
Domain cluster: representative
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1uw0A01 3.30.1740.10 Alpha Beta › 2-Layer Sandwich › first zn-finger domain of poly(adp-ribose) polymerase-1 › Zinc finger, PARP-type 0.65 51.0 4.32e-01 89.1% 51.0%
2qbyB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 44.0 3.77e-01 78.2% 76.9%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 41.0 3.50e-01 74.5% 70.8%
1bm9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 41.0 3.26e-01 76.4% 59.2%
6kf9G01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 42.0 3.70e-01 78.2% 75.6%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 39.0 3.59e-01 72.7% 77.9%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 39.0 3.38e-01 72.7% 61.8%
3c18A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 40.0 4.02e-01 78.2% 91.2%
1b7eA01 3.90.350.10 Alpha Beta › Alpha-Beta Complex › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 0.55 41.0 2.74e-01 81.8% 50.8%
2dqlA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 40.0 3.20e-01 78.2% 60.9%
4gniA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.55 41.0 3.51e-01 80.0% 75.6%
6rzqA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.55 40.0 3.50e-01 80.0% 75.3%
2qrdE01 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.54 43.0 3.07e-01 90.9% 76.1%
2v1xA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 39.0 3.21e-01 80.0% 59.1%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 38.0 3.21e-01 76.4% 66.0%
3p5jB01 2.20.25.530 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.54 39.0 3.57e-01 78.2% 95.9%
3vbhC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 42.0 2.78e-01 87.3% 66.9%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 37.0 3.05e-01 74.5% 55.4%
2p4wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 39.0 3.28e-01 81.8% 59.2%
1l3iA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 37.0 2.61e-01 74.5% 87.0%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 37.0 3.03e-01 74.5% 61.0%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 36.0 3.07e-01 74.5% 61.9%
3d2fA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.52 39.0 3.40e-01 80.0% 78.6%
1vdhA01 3.30.70.1030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 0.52 43.0 3.49e-01 100.0% 62.0%
1k8kA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.52 39.0 3.33e-01 81.8% 79.3%
3e0jB00 3.90.1030.20 Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 0.51 37.0 2.96e-01 85.5% 65.7%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 37.0 3.11e-01 80.0% 65.0%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5049822 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.79 60.0 6.52e-01 89.1% 100.0%
1291965 378.1.1.16 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › DraIII 0.65 57.0 3.81e-01 98.2% 26.0%
3442153 376.1.3.8 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf-HC5HC2H 0.64 51.0 4.65e-01 90.9% 89.3%
5066057 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.64 44.0 3.76e-01 83.6% 44.4%
3615178 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 49.0 3.41e-01 87.3% 37.8%
3826354 376.1.3.10 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD_2,zf-HC5HC2H_2 0.62 46.0 3.42e-01 87.3% 38.8%
4941287 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.61 43.0 3.67e-01 74.5% 65.6%
3713489 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 47.0 3.31e-01 87.3% 46.3%
2154862 2498.1.1.23 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M49 0.59 47.0 2.66e-01 89.1% 85.2%
5029277 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.59 41.0 3.41e-01 74.5% 60.0%
1839917 101.1.2.171 alpha arrays › HTH › HTH › winged helix domain › HTH_52 0.59 40.0 3.86e-01 72.7% 95.5%
3604578 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.59 41.0 3.44e-01 76.4% 59.0%
5079768 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 41.0 3.60e-01 74.5% 73.8%
4985036 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.59 40.0 2.92e-01 72.7% 35.3%
4999154 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.58 41.0 3.61e-01 74.5% 71.8%
4930596 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.58 41.0 2.99e-01 76.4% 36.5%
4970576 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.58 40.0 2.87e-01 74.5% 33.9%
5054122 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.58 40.0 2.95e-01 74.5% 36.9%
4957324 101.1.2.920 alpha arrays › HTH › HTH › winged helix domain › HTH_TbsP_C 0.58 42.0 3.31e-01 80.0% 60.0%
4507638 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.58 40.0 2.92e-01 74.5% 37.0%
4646072 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.58 41.0 2.95e-01 76.4% 35.9%
5033035 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 40.0 3.24e-01 76.4% 52.5%
3946755 605.1.1.26 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › DUF2058 0.57 42.0 3.39e-01 81.8% 56.5%
5069274 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.57 40.0 3.21e-01 74.5% 54.8%
3400190 101.1.2.24 alpha arrays › HTH › HTH › winged helix domain › MAGE 0.57 41.0 3.27e-01 81.8% 82.3%
4957195 101.1.2.892 alpha arrays › HTH › HTH › winged helix domain › ArsR 0.57 40.0 3.33e-01 76.4% 55.2%
5042462 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.57 40.0 2.91e-01 74.5% 37.0%
4947948 101.1.2.876 alpha arrays › HTH › HTH › winged helix domain › tRNA-synt_2d 0.56 39.0 3.52e-01 85.5% 49.4%
4561147 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.56 39.0 3.08e-01 74.5% 48.4%
4358890 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.56 39.0 3.21e-01 76.4% 67.0%
4974744 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.56 40.0 2.90e-01 78.2% 28.6%
4438513 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.56 41.0 3.35e-01 80.0% 56.4%
4964954 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.56 40.0 3.12e-01 76.4% 50.0%
4344487 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.56 39.0 2.86e-01 74.5% 37.0%
4527101 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.56 39.0 2.86e-01 74.5% 39.4%
4961841 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.56 40.0 3.19e-01 80.0% 62.3%
4487383 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.56 39.0 3.26e-01 87.3% 38.2%
4456198 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 39.0 2.78e-01 76.4% 35.1%
4974447 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 39.0 3.13e-01 76.4% 51.7%
4943395 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 39.0 2.82e-01 74.5% 37.1%
4998735 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 40.0 3.12e-01 80.0% 63.7%
5055444 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.55 39.0 3.30e-01 76.4% 60.0%
5011468 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.55 38.0 3.06e-01 85.5% 32.8%
4947925 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 39.0 2.85e-01 74.5% 38.0%
5052491 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.55 37.0 2.68e-01 72.7% 34.2%
5031648 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.55 38.0 2.83e-01 74.5% 37.6%
5041543 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.55 39.0 3.00e-01 76.4% 45.0%
5016748 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.55 38.0 3.06e-01 74.5% 51.7%
4314672 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.55 39.0 3.26e-01 76.4% 66.7%
5007541 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.55 38.0 3.16e-01 83.6% 38.1%
164542 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.55 40.0 3.20e-01 78.2% 60.9%
4239635 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.55 39.0 2.83e-01 76.4% 37.6%
4478999 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.55 38.0 2.81e-01 76.4% 36.4%
4061942 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.54 41.0 3.31e-01 87.3% 86.4%
4993652 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.54 38.0 2.74e-01 74.5% 35.4%
5025840 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 39.0 3.39e-01 81.8% 76.0%
5070663 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 38.0 2.89e-01 74.5% 52.9%
5025618 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 38.0 3.15e-01 76.4% 56.4%
4986012 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.54 37.0 2.60e-01 74.5% 30.0%
4943782 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 39.0 3.12e-01 80.0% 57.5%
4982343 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 38.0 2.80e-01 74.5% 47.7%
5022036 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 38.0 2.97e-01 76.4% 48.1%
5062171 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 38.0 2.83e-01 76.4% 49.3%
5032906 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.54 40.0 3.05e-01 81.8% 47.9%
3782190 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.54 36.0 2.97e-01 70.9% 63.2%
3958859 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 37.0 3.37e-01 74.5% 78.8%
5058727 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 38.0 2.87e-01 76.4% 51.0%
4203701 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.53 38.0 2.99e-01 76.4% 59.7%
5035685 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.53 37.0 2.96e-01 74.5% 57.3%
4221024 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 39.0 2.71e-01 80.0% 24.9%
5070276 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.53 39.0 2.93e-01 80.0% 53.8%
4981949 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 37.0 3.39e-01 76.4% 82.5%
4998031 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.53 37.0 2.71e-01 74.5% 35.3%
5062314 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 37.0 2.81e-01 76.4% 50.0%
5069995 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.53 39.0 2.65e-01 80.0% 36.9%
4959599 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.53 36.0 2.99e-01 74.5% 62.3%
3986225 101.1.9.32 alpha arrays › HTH › HTH › Putative DNA-binding domain › ANT 0.52 38.0 2.66e-01 89.1% 21.5%
5069500 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 37.0 2.80e-01 76.4% 49.3%
3280086 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.52 37.0 2.65e-01 76.4% 37.8%
5012709 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 38.0 2.61e-01 83.6% 57.9%
4965874 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.51 36.0 2.87e-01 78.2% 47.8%
4940950 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.51 37.0 3.37e-01 80.0% 91.3%
3241558 376.1.3.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.51 38.0 3.66e-01 83.6% 72.3%
5070036 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.50 37.0 2.79e-01 80.0% 54.0%
5058943 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.50 36.0 2.91e-01 80.0% 65.0%