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IMGVR_UViG_3300029305_005928-3300029305-Ga0307249_1010334512
Arc-VirIMGVR_UViG_3300029305_005928-3300029305-Ga0307249_1010334512
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 215-447
Domain cluster:
rep: CAKLQF020000001.1__CAH1070266.1__SAMEA5780031_00360__00352__D220-408
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00589.28 best | Phage_integrase | 62.3 | 7.30e-17 | 75.1% | 80.2% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4a8eA02 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.89 | 63.0 | 7.22e-01 | 96.6% | 93.9% |
| 5jk0B01 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.81 | 56.0 | 6.51e-01 | 84.1% | 94.2% |
| 1f44A01 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.78 | 57.0 | 6.30e-01 | 84.1% | 89.2% |
| 3nkhA00 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.77 | 60.0 | 6.20e-01 | 83.7% | 84.2% |
| 1ae9A00 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.77 | 54.0 | 6.28e-01 | 91.4% | 97.1% |
| 2a3vA02 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.71 | 57.0 | 5.98e-01 | 84.1% | 90.0% |
| 2v6eA03 | 1.10.443.30 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Telomere resolvase | 0.58 | 47.0 | 4.85e-01 | 95.3% | 87.1% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4637388 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.91 | 55.0 | 6.44e-01 | 84.1% | 82.4% |
| 4994277 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.89 | 58.0 | 6.58e-01 | 84.1% | 84.4% |
| 4183457 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.88 | 53.0 | 6.72e-01 | 84.1% | 96.6% |
| 5059725 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.87 | 56.0 | 6.36e-01 | 84.1% | 83.3% |
| 4940211 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.86 | 58.0 | 6.77e-01 | 83.7% | 92.4% |
| 4392937 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.86 | 53.0 | 6.46e-01 | 84.1% | 91.6% |
| 4004483 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.86 | 58.0 | 6.40e-01 | 84.1% | 83.2% |
| 5028306 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.85 | 58.0 | 6.57e-01 | 84.1% | 88.3% |
| 4998701 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.84 | 57.0 | 6.51e-01 | 84.1% | 88.3% |
| 3946063 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.84 | 67.0 | 7.26e-01 | 97.0% | 96.4% |
| 4981966 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.84 | 58.0 | 6.27e-01 | 84.1% | 81.5% |
| 5027341 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.83 | 52.0 | 6.35e-01 | 84.1% | 91.9% |
| 5016957 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.82 | 58.0 | 6.67e-01 | 83.7% | 94.9% |
| 4007744 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.82 | 63.0 | 6.74e-01 | 84.1% | 88.8% |
| 5083506 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.82 | 55.0 | 6.23e-01 | 84.1% | 85.9% |
| 4965845 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 58.0 | 6.43e-01 | 83.7% | 88.4% |
| 4992939 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 59.0 | 6.81e-01 | 94.4% | 100.0% |
| 4007467 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 67.0 | 6.90e-01 | 97.4% | 90.0% |
| 4997941 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.80 | 67.0 | 7.06e-01 | 95.3% | 95.2% |
| 3964171 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.79 | 51.0 | 5.95e-01 | 84.1% | 86.8% |
| 5076857 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.76 | 55.0 | 6.29e-01 | 93.1% | 97.7% |
| 4965169 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.74 | 60.0 | 6.34e-01 | 83.7% | 91.4% |
| 4962166 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.71 | 55.0 | 6.15e-01 | 97.0% | 98.9% |
| 4961917 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.71 | 55.0 | 6.11e-01 | 97.4% | 97.9% |
| 3244217 | 101.1.2.506 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_NWD1 | 0.52 | 26.0 | 3.35e-01 | 92.7% | 84.8% |
D2
medium
residues 16-96
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4khbC00 | 2.30.29.210 | Mainly Beta › Roll › PH-domain like › FACT complex subunit Spt16p/Cdc68p | 0.65 | 44.0 | 4.07e-01 | 79.0% | 53.8% |
| 1w96C04 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.60 | 47.0 | 3.44e-01 | 88.9% | 85.2% |
| 2dmyA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 39.0 | 3.74e-01 | 92.6% | 59.8% |
| 2rs7A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 38.0 | 4.03e-01 | 82.7% | 75.7% |
| 1xzpB00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.57 | 42.0 | 3.56e-01 | 77.8% | 73.3% |
| 5h8yD02 | 3.30.413.10 | Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 | 0.57 | 47.0 | 3.60e-01 | 93.8% | 85.7% |
| 3f6gA01 | 3.30.160.740 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 33.0 | 3.77e-01 | 82.7% | 89.7% |
| 3cmbA00 | 2.40.400.10 | Mainly Beta › Beta Barrel › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like | 0.51 | 42.0 | 3.10e-01 | 100.0% | 77.0% |
| 1novA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 34.0 | 2.39e-01 | 70.4% | 87.7% |
| 7uclA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 35.0 | 3.27e-01 | 72.8% | 82.4% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3297150 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.65 | 44.0 | 4.12e-01 | 79.0% | 57.0% |
| 4997345 | 3435.1.1.0 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC | 0.65 | 46.0 | 4.01e-01 | 75.3% | 76.0% |
| 3726419 | 7552.1.1.1 ↗ | a/b three-layered sandwiches › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase | 0.64 | 52.0 | 3.18e-01 | 87.7% | 59.4% |
| 3730814 | 7552.1.1.1 ↗ | a/b three-layered sandwiches › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase | 0.64 | 51.0 | 3.16e-01 | 87.7% | 66.5% |
| 3735021 | 7552.1.1.1 ↗ | a/b three-layered sandwiches › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase | 0.63 | 51.0 | 3.18e-01 | 88.9% | 64.4% |
| 3205638 | 7552.1.1.1 ↗ | a/b three-layered sandwiches › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase | 0.61 | 49.0 | 3.22e-01 | 87.7% | 67.9% |
| 3495172 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.61 | 49.0 | 3.91e-01 | 88.9% | 48.5% |
| 4973090 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.60 | 48.0 | 4.46e-01 | 85.2% | 91.0% |
| 3442241 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.60 | 42.0 | 2.83e-01 | 72.8% | 40.3% |
| 3576101 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.60 | 41.0 | 3.37e-01 | 71.6% | 40.0% |
| 3657432 | 220.1.1.205 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_PHS1 | 0.59 | 38.0 | 3.25e-01 | 84.0% | 40.3% |
| 3707345 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 40.0 | 3.89e-01 | 70.4% | 83.3% |
| 3284948 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 49.0 | 4.83e-01 | 90.1% | 88.2% |
| 4022645 | 868.1.1.2 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase | 0.59 | 40.0 | 2.81e-01 | 70.4% | 22.7% |
| 4019666 | 7552.1.1.1 ↗ | a/b three-layered sandwiches › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase | 0.57 | 46.0 | 2.97e-01 | 91.4% | 81.9% |
| 4451014 | 7552.1.1.1 ↗ | a/b three-layered sandwiches › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase | 0.57 | 38.0 | 2.43e-01 | 70.4% | 73.1% |
| 3600840 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.56 | 43.0 | 4.02e-01 | 82.7% | 88.0% |
| 5065809 | 3518.1.1.1 ↗ | a+b two layers › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › FMN_bind | 0.56 | 42.0 | 3.35e-01 | 80.2% | 71.9% |
| 3268156 | 223.2.1.4 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN | 0.55 | 50.0 | 3.81e-01 | 100.0% | 74.6% |
| 3593374 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.55 | 44.0 | 3.95e-01 | 87.7% | 75.7% |
| 3476563 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 45.0 | 3.96e-01 | 88.9% | 93.3% |
| 3713548 | 330.1.1.22 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF26536 | 0.55 | 45.0 | 4.05e-01 | 92.6% | 70.4% |
| 4551329 | 3518.1.1.1 ↗ | a+b two layers › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › FMN_bind | 0.55 | 41.0 | 3.43e-01 | 79.0% | 86.4% |
| 4409019 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.55 | 38.0 | 3.88e-01 | 87.7% | 73.8% |
| 3612182 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 37.0 | 3.60e-01 | 70.4% | 83.3% |
| 3705552 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 43.0 | 3.38e-01 | 85.2% | 48.5% |
| 3925480 | 5052.1.1.1 ↗ | alpha complex topology › Proton glutamate symport protein › Proton glutamate symport protein › Proton glutamate symport protein › SDF | 0.53 | 41.0 | 2.69e-01 | 90.1% | 61.3% |
| 3211250 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 39.0 | 2.88e-01 | 80.2% | 28.6% |
| 3609931 | 868.1.1.2 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase | 0.53 | 40.0 | 2.94e-01 | 82.7% | 88.7% |
| 3412138 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 43.0 | 3.58e-01 | 91.4% | 61.3% |
| 3351384 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.52 | 46.0 | 3.05e-01 | 100.0% | 82.2% |
| 3516207 | 327.6.1.6 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › Secretin | 0.52 | 41.0 | 3.08e-01 | 87.7% | 91.8% |
| 3592296 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.50 | 41.0 | 3.72e-01 | 95.1% | 81.7% |
| 3870810 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 39.0 | 2.18e-01 | 88.9% | 13.6% |
D3
medium
residues 97-214
Domain cluster:
rep: S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00921__D149-260
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13102.13 best | Phage_int_SAM_5 | 24.2 | 4.80e-05 | 85.6% | 81.2% |
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nrwA00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.89 | 72.0 | 7.67e-01 | 90.7% | 96.2% |
| 2kobA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.87 | 65.0 | 7.24e-01 | 88.1% | 97.8% |
| 2kj5A00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.86 | 67.0 | 6.79e-01 | 90.7% | 81.9% |
| 3lysA00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.86 | 71.0 | 7.55e-01 | 94.9% | 97.1% |
| 2kd1A00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.86 | 72.0 | 7.26e-01 | 96.6% | 88.1% |
| 2kj9A00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.81 | 63.0 | 6.39e-01 | 89.8% | 81.4% |
| 2a3vB01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.79 | 59.0 | 6.57e-01 | 90.7% | 97.9% |
| 2keyA00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.79 | 63.0 | 6.46e-01 | 88.1% | 88.4% |
| 2kj8A00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.78 | 62.0 | 6.28e-01 | 90.7% | 83.9% |
| 2i2xB01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.68 | 52.0 | 5.56e-01 | 95.8% | 94.0% |
| 3ztaA00 | 1.10.490.130 | Mainly Alpha › Orthogonal Bundle › Globin-like › | 0.63 | 55.0 | 5.27e-01 | 97.5% | 94.2% |
| 1txuA01 | 1.10.246.120 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.62 | 45.0 | 4.95e-01 | 75.4% | 97.9% |
| 2a2fX02 | 1.20.58.670 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain D | 0.61 | 45.0 | 4.45e-01 | 77.1% | 81.4% |
| 2mx8A01 | 1.10.274.70 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain | 0.59 | 50.0 | 5.15e-01 | 92.4% | 98.2% |
| 2nrlA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.59 | 51.0 | 4.80e-01 | 96.6% | 89.7% |
| 1urvA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 50.0 | 4.63e-01 | 95.8% | 89.0% |
| 6bmeA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 49.0 | 4.88e-01 | 94.9% | 88.2% |
| 3lwjA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 43.0 | 3.72e-01 | 79.7% | 62.2% |
| 1gcvB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.57 | 48.0 | 4.66e-01 | 94.1% | 86.8% |
| 1yowA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.57 | 42.0 | 3.46e-01 | 79.7% | 78.7% |
| 1q6aA00 | 1.10.1240.30 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain | 0.56 | 40.0 | 4.22e-01 | 72.9% | 83.2% |
| 3hyuA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.56 | 47.0 | 4.49e-01 | 94.1% | 85.8% |
| 3qhbA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.56 | 42.0 | 3.68e-01 | 79.7% | 97.8% |
| 1a00B00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.55 | 46.0 | 4.38e-01 | 94.1% | 91.8% |
| 2mabA00 | 1.10.10.1350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain | 0.55 | 40.0 | 4.15e-01 | 76.3% | 98.2% |
| 1yxrA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.54 | 34.0 | 3.98e-01 | 94.1% | 98.6% |
| 1jt6A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 38.0 | 3.67e-01 | 73.7% | 78.1% |
| 1w2qA01 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.53 | 39.0 | 4.02e-01 | 78.0% | 89.4% |
| 1w99A01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.52 | 42.0 | 3.67e-01 | 98.3% | 57.8% |
| 3vprA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 37.0 | 3.54e-01 | 78.8% | 81.4% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3587101 | 186.1.1.5 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 | 0.89 | 74.0 | 7.80e-01 | 93.2% | 96.2% |
| 4396981 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.87 | 70.0 | 7.61e-01 | 91.5% | 100.0% |
| 5020383 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.86 | 75.0 | 7.27e-01 | 90.7% | 98.5% |
| 4362692 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.86 | 70.0 | 7.56e-01 | 89.0% | 100.0% |
| 4220769 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.86 | 72.0 | 7.66e-01 | 90.7% | 99.0% |
| 4004726 | 186.1.1.8 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_M | 0.85 | 71.0 | 7.19e-01 | 94.9% | 88.7% |
| 4097981 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.85 | 69.0 | 7.32e-01 | 91.5% | 96.2% |
| 4959184 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.84 | 65.0 | 7.23e-01 | 91.5% | 100.0% |
| 3589750 | 186.1.1.5 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 | 0.84 | 70.0 | 7.42e-01 | 97.5% | 98.1% |
| 4090274 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.84 | 71.0 | 7.54e-01 | 92.4% | 100.0% |
| 3587238 | 186.1.1.3 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_5 | 0.84 | 71.0 | 7.50e-01 | 94.9% | 99.0% |
| 4962931 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.84 | 74.0 | 7.51e-01 | 97.5% | 95.7% |
| 5028331 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.84 | 64.0 | 7.09e-01 | 93.2% | 98.9% |
| 4061722 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.84 | 70.0 | 7.17e-01 | 94.9% | 90.4% |
| 4173849 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.83 | 72.0 | 7.45e-01 | 96.6% | 98.2% |
| 4458305 | 186.1.1.5 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 | 0.83 | 75.0 | 7.59e-01 | 96.6% | 96.5% |
| 4160987 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.83 | 73.0 | 7.60e-01 | 97.5% | 100.0% |
| 4660849 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.83 | 76.0 | 7.31e-01 | 96.6% | 98.5% |
| 4979940 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.82 | 68.0 | 7.02e-01 | 93.2% | 92.7% |
| 4969225 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.82 | 69.0 | 7.19e-01 | 92.4% | 95.5% |
| 4038795 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.82 | 70.0 | 7.24e-01 | 89.8% | 100.0% |
| 5027340 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.82 | 61.0 | 6.84e-01 | 88.1% | 100.0% |
| 4053119 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.82 | 75.0 | 7.51e-01 | 97.5% | 99.2% |
| 4965639 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.82 | 68.0 | 7.18e-01 | 87.3% | 100.0% |
| 4051052 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.82 | 70.0 | 7.26e-01 | 96.6% | 98.2% |
| 4579981 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.81 | 71.0 | 7.38e-01 | 99.2% | 100.0% |
| 4994276 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.81 | 59.0 | 6.65e-01 | 90.7% | 98.9% |
| 4996189 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.81 | 67.0 | 7.13e-01 | 94.9% | 99.0% |
| 5024627 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.81 | 65.0 | 6.97e-01 | 97.5% | 99.0% |
| 4034068 | 186.1.1.5 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 | 0.81 | 65.0 | 7.00e-01 | 90.7% | 100.0% |
| 4063794 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.80 | 70.0 | 7.21e-01 | 96.6% | 99.1% |
| 3945277 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.80 | 65.0 | 6.82e-01 | 96.6% | 96.2% |
| 5054950 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.80 | 68.0 | 6.69e-01 | 90.7% | 87.2% |
| 5069657 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.79 | 58.0 | 6.53e-01 | 90.7% | 100.0% |
| 134501 | 186.1.1.3 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_5 | 0.79 | 63.0 | 6.68e-01 | 88.1% | 95.1% |
| 5000879 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.79 | 64.0 | 6.48e-01 | 91.5% | 86.1% |
| 3602667 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.79 | 69.0 | 7.14e-01 | 95.8% | 99.1% |
| 5034381 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.78 | 71.0 | 7.23e-01 | 96.6% | 99.1% |
| 4981576 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.78 | 57.0 | 6.45e-01 | 90.7% | 100.0% |
| 3517981 | 186.1.1.11 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_2 | 0.77 | 64.0 | 6.74e-01 | 94.1% | 98.1% |
| 5081699 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.77 | 57.0 | 6.37e-01 | 88.1% | 100.0% |
| 5003451 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.76 | 66.0 | 6.48e-01 | 98.3% | 88.0% |
| 5061202 | 186.1.1.3 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_5 | 0.76 | 68.0 | 6.60e-01 | 97.5% | 86.9% |
| 3253222 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.70 | 64.0 | 6.26e-01 | 98.3% | 98.4% |
| 4933964 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.68 | 47.0 | 5.36e-01 | 89.0% | 100.0% |
| 3641172 | 101.1.1.295 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_70 | 0.64 | 44.0 | 4.90e-01 | 75.4% | 92.2% |
| 4028957 | 603.2.1.0 ↗ | alpha bundles › STAT-like › STAT › STAT | 0.63 | 45.0 | 4.03e-01 | 74.6% | 93.3% |
| 3743679 | 101.1.1.148 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › EPL1 | 0.60 | 44.0 | 4.67e-01 | 77.1% | 93.3% |
| 3696425 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 46.0 | 3.97e-01 | 81.4% | 53.0% |
| 4871777 | 106.1.1.1 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Globin | 0.59 | 50.0 | 4.65e-01 | 94.1% | 88.6% |
| 3176307 | 106.1.1.1 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Globin | 0.57 | 48.0 | 4.62e-01 | 94.9% | 85.0% |
| 1680017 | 592.3.1.1 ↗ | alpha arrays › PWI domain-like › N-terminal domain of egg case silk protein TuSp1 › N-terminal domain of egg case silk protein TuSp1 › Spidroin_N | 0.57 | 50.0 | 4.84e-01 | 98.3% | 89.5% |
| 3590491 | 604.39.1.33 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › ThrE | 0.55 | 46.0 | 4.43e-01 | 94.1% | 100.0% |