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IMGVR_UViG_3300029305_008988-3300029305-Ga0307249_101074771
Arc-VirIMGVR_UViG_3300029305_008988-3300029305-Ga0307249_101074771
Identity
- Kingdom:
- archaea
Quality
67.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 244-311
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3edpA02 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.70 | 51.0 | 3.92e-01 | 76.5% | 48.6% |
| 2p19A01 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.68 | 47.0 | 3.77e-01 | 72.1% | 38.5% |
| 3r87A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.67 | 46.0 | 3.72e-01 | 72.1% | 74.2% |
| 3cnvA01 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.67 | 47.0 | 3.56e-01 | 73.5% | 34.2% |
| 3kuvB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.65 | 44.0 | 3.61e-01 | 72.1% | 78.2% |
| 3d2lA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.60 | 39.0 | 4.03e-01 | 72.1% | 71.4% |
| 1wfqA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 42.0 | 4.12e-01 | 75.0% | 100.0% |
| 5iu1B00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.58 | 38.0 | 3.27e-01 | 70.6% | 41.1% |
| 1mc0A01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.57 | 40.0 | 3.14e-01 | 75.0% | 33.5% |
| 3bioA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.56 | 39.0 | 3.35e-01 | 75.0% | 64.0% |
| 3px5A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.56 | 40.0 | 3.31e-01 | 75.0% | 44.8% |
| 1jb7A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 39.0 | 2.91e-01 | 73.5% | 40.2% |
| 3ijlA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.56 | 39.0 | 3.35e-01 | 75.0% | 46.3% |
| 3jvaA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.55 | 39.0 | 3.33e-01 | 76.5% | 46.5% |
| 7usrA01 | 2.60.40.2860 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 38.0 | 3.07e-01 | 75.0% | 62.3% |
| 1tkkA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.54 | 39.0 | 3.29e-01 | 76.5% | 46.1% |
| 2fwvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 38.0 | 2.74e-01 | 73.5% | 26.3% |
| 3klqA01 | 2.60.40.3050 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 37.0 | 3.07e-01 | 72.1% | 42.0% |
| 4glaC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 35.0 | 3.33e-01 | 70.6% | 93.3% |
| 6ksrA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 31.0 | 2.44e-01 | 79.4% | 25.0% |
| 2pmqA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 36.0 | 2.92e-01 | 75.0% | 38.8% |
| 1bqgA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 35.0 | 2.82e-01 | 73.5% | 60.9% |
| 3ci0J01 | 3.10.610.10 | Alpha Beta › Roll › Pili subunits › GSPII I/J protein-like | 0.51 | 35.0 | 3.10e-01 | 73.5% | 48.1% |
| 2d42A02 | 3.10.450.380 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 34.0 | 3.46e-01 | 89.7% | 72.3% |
| 2jdcA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 40.0 | 3.28e-01 | 94.1% | 100.0% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3970103 | 814.1.1.0 ↗ | a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase | 0.70 | 49.0 | 3.72e-01 | 73.5% | 32.5% |
| 1558719 | 12.6.1.4 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Glyco_hydro127M | 0.65 | 36.0 | 3.12e-01 | 70.6% | 35.2% |
| 3917310 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.61 | 39.0 | 4.01e-01 | 73.5% | 67.7% |
| 3896126 | 4023.1.1.0 ↗ | a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core | 0.60 | 36.0 | 3.20e-01 | 82.4% | 40.0% |
| 3967410 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.59 | 38.0 | 2.51e-01 | 72.1% | 15.5% |
| 3398355 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.59 | 41.0 | 2.79e-01 | 73.5% | 47.1% |
| 3574358 | 220.1.1.18 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PTB | 0.58 | 42.0 | 3.66e-01 | 76.5% | 53.3% |
| 4943678 | 4178.1.1.0 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain | 0.58 | 38.0 | 3.53e-01 | 70.6% | 54.1% |
| 3665028 | 252.1.1.0 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD | 0.57 | 37.0 | 3.41e-01 | 73.5% | 48.9% |
| 3927132 | 221.13.1.0 ↗ | a+b two layers › beta-Grasp › Mitochondrial calcium uniporter N-terminal domain › Mitochondrial calcium uniporter N-terminal domain | 0.57 | 41.0 | 3.44e-01 | 75.0% | 85.2% |
| 3700246 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.57 | 49.0 | 4.15e-01 | 97.1% | 93.9% |
| 5052424 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.57 | 38.0 | 3.07e-01 | 70.6% | 71.4% |
| 3707657 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.56 | 43.0 | 3.51e-01 | 83.8% | 44.6% |
| 5075779 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.56 | 40.0 | 3.83e-01 | 77.9% | 65.0% |
| 4028826 | 377.1.2.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger | 0.56 | 47.0 | 3.96e-01 | 95.6% | 100.0% |
| 3693991 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.55 | 39.0 | 2.97e-01 | 75.0% | 44.6% |
| 159489 | 825.1.1.2 ↗ | beta complex topology › Aerolysin family of pore-forming toxins › Aerolysin family of pore-forming toxins › Aerolysin family of pore-forming toxins › ETX_MTX2 | 0.55 | 41.0 | 2.79e-01 | 77.9% | 77.5% |
| 5035423 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.55 | 38.0 | 3.53e-01 | 97.1% | 56.5% |
| 2123424 | 218.1.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N | 0.55 | 34.0 | 2.81e-01 | 72.1% | 34.4% |
| 3418904 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.55 | 32.0 | 2.89e-01 | 75.0% | 39.0% |
| 185990 | 3454.1.1.1 ↗ | beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like › PilP | 0.53 | 33.0 | 2.91e-01 | 83.8% | 38.1% |
| 3985962 | 223.1.1.53 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_6 | 0.52 | 37.0 | 3.08e-01 | 86.8% | 39.3% |
| 3166912 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 42.0 | 3.21e-01 | 98.5% | 56.3% |
| 5050431 | 283.2.1.8 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › PF29994 | 0.51 | 35.0 | 3.08e-01 | 72.1% | 55.2% |
| 3206195 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.51 | 42.0 | 2.84e-01 | 92.6% | 22.5% |
| 3681185 | 2.1.1.130 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 | 0.51 | 33.0 | 2.37e-01 | 73.5% | 18.8% |
D2
high
residues 553-645
Domain cluster:
rep: MW960037.1__QWY83581.1__X__00027__D159-241
D3
high
residues 667-834
Domain cluster:
rep: IMGVR_UViG_3300021541_000005-3300021541-Ga0214529_10004183__D671-878
D4
medium
residues 69-139
D5
medium
residues 192-243
Domain cluster:
representative
CATH (54)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1x47A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.72 | 49.0 | 4.15e-01 | 76.9% | 42.5% |
| 2cofA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.71 | 46.0 | 3.63e-01 | 71.2% | 31.8% |
| 3l4gC04 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.66 | 46.0 | 2.91e-01 | 75.0% | 19.0% |
| 3a3jA02 | 2.60.410.10 | Mainly Beta › Sandwich › Peptidoglycan synthesis regulatory factor (PBP3), Domain 2 › D-Ala-D-Ala carboxypeptidase, C-terminal domain | 0.66 | 46.0 | 3.85e-01 | 75.0% | 53.3% |
| 3mcpA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.65 | 48.0 | 3.76e-01 | 84.6% | 36.6% |
| 3bf2A00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.65 | 47.0 | 3.57e-01 | 78.8% | 44.8% |
| 1jlcB03 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.65 | 44.0 | 3.36e-01 | 80.8% | 28.6% |
| 1tyeA00 | 2.130.10.130 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal | 0.65 | 50.0 | 2.94e-01 | 86.5% | 30.5% |
| 3tf8B00 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.64 | 34.0 | 2.32e-01 | 78.8% | 14.7% |
| 1c8uA02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.63 | 46.0 | 3.56e-01 | 76.9% | 34.8% |
| 3cjyA00 | 2.40.160.210 | Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain | 0.62 | 45.0 | 2.88e-01 | 76.9% | 16.2% |
| 4ywrA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.61 | 42.0 | 2.80e-01 | 73.1% | 17.1% |
| 3hxlA02 | 2.60.40.4290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 43.0 | 3.64e-01 | 73.1% | 42.2% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 42.0 | 3.72e-01 | 71.2% | 53.9% |
| 2l3tA02 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.61 | 44.0 | 3.63e-01 | 78.8% | 41.0% |
| 3icaB00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.61 | 42.0 | 2.88e-01 | 75.0% | 22.3% |
| 5mghA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.61 | 45.0 | 2.80e-01 | 80.8% | 16.9% |
| 7k98B04 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.60 | 41.0 | 2.76e-01 | 73.1% | 21.1% |
| 1xipA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.60 | 45.0 | 2.72e-01 | 82.7% | 19.1% |
| 2rhqB05 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.59 | 40.0 | 2.76e-01 | 73.1% | 22.1% |
| 2fkcA01 | 3.40.1350.40 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.59 | 48.0 | 3.82e-01 | 92.3% | 62.7% |
| 4mdaA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.59 | 45.0 | 3.09e-01 | 92.3% | 22.5% |
| 1ym5A01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.58 | 39.0 | 2.98e-01 | 71.2% | 47.8% |
| 4mjgA00 | 3.30.2030.30 | Alpha Beta › 2-Layer Sandwich › TBP-like › | 0.58 | 39.0 | 2.79e-01 | 71.2% | 20.9% |
| 1nijA02 | 3.30.1220.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Yjia; Chain: A;domain 2 › CobW-like, C-terminal domain | 0.58 | 40.0 | 3.17e-01 | 86.5% | 33.6% |
| 3rmuA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.57 | 37.0 | 2.86e-01 | 71.2% | 26.1% |
| 1ospO01 | 2.40.128.160 | Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) | 0.57 | 39.0 | 3.22e-01 | 73.1% | 36.2% |
| 3dcxA00 | 2.30.29.50 | Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain | 0.57 | 39.0 | 3.05e-01 | 73.1% | 97.4% |
| 6qk7A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 42.0 | 2.65e-01 | 86.5% | 32.1% |
| 3f14A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 39.0 | 3.09e-01 | 75.0% | 39.3% |
| 3brcA02 | 3.40.50.10150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › B12-dependent dehydatase associated subunit | 0.56 | 41.0 | 3.27e-01 | 82.7% | 83.3% |
| 2mnjB00 | 2.60.40.4160 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 42.0 | 3.63e-01 | 86.5% | 100.0% |
| 2wiiC02 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.55 | 37.0 | 3.59e-01 | 71.2% | 67.2% |
| 5n1tA03 | 3.90.760.10 | Alpha Beta › Alpha-Beta Complex › Flavocytochrome C Sulfide Dehydrogenase; Chain A Domain 3 › Flavocytochrome c sulphide dehydrogenase, flavin-binding domain | 0.55 | 43.0 | 3.89e-01 | 86.5% | 78.9% |
| 6syyA01 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.54 | 38.0 | 2.83e-01 | 73.1% | 81.9% |
| 1xzpB00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.54 | 40.0 | 3.09e-01 | 82.7% | 67.2% |
| 1aj6A00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.54 | 38.0 | 2.62e-01 | 75.0% | 18.6% |
| 1sqhA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 39.0 | 2.84e-01 | 80.8% | 25.9% |
| 2nugB02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 37.0 | 3.41e-01 | 75.0% | 53.5% |
| 1ss4A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.54 | 36.0 | 2.76e-01 | 71.2% | 32.2% |
| 3hkmB00 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.53 | 42.0 | 2.88e-01 | 90.4% | 42.3% |
| 2w9jA00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.53 | 36.0 | 3.33e-01 | 73.1% | 50.7% |
| 5fl3A01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.53 | 36.0 | 2.95e-01 | 73.1% | 37.0% |
| 1lshA03 | 2.20.50.20 | Mainly Beta › Single Sheet › Outer Surface Protein A; domain 2 › Lipovitellin. Chain A, domain 3 | 0.53 | 42.0 | 3.55e-01 | 94.2% | 85.7% |
| 1uhzA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 37.0 | 3.21e-01 | 76.9% | 43.8% |
| 2if7B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.27e-01 | 76.9% | 62.1% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.52 | 35.0 | 3.64e-01 | 71.2% | 85.4% |
| 1ylxA00 | 3.30.70.1480 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like | 0.52 | 37.0 | 3.18e-01 | 80.8% | 44.4% |
| 1di2A00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 36.0 | 3.37e-01 | 75.0% | 56.5% |
| 2l2mA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 37.0 | 3.51e-01 | 80.8% | 60.0% |
| 5kvsA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.52 | 35.0 | 2.58e-01 | 73.1% | 23.5% |
| 2d73A01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.51 | 36.0 | 2.38e-01 | 78.8% | 38.7% |
| 6j8yC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.51 | 35.0 | 2.34e-01 | 80.8% | 14.9% |
| 2arfA00 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.50 | 42.0 | 3.07e-01 | 100.0% | 37.0% |
ECOD (67)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3823735 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.79 | 53.0 | 4.49e-01 | 76.9% | 43.5% |
| 3594673 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.70 | 49.0 | 3.10e-01 | 76.9% | 22.8% |
| 4487255 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.68 | 45.0 | 4.00e-01 | 76.9% | 46.7% |
| 3629639 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.68 | 46.0 | 3.62e-01 | 76.9% | 32.2% |
| 3481102 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.67 | 46.0 | 3.52e-01 | 76.9% | 29.6% |
| 4945086 | 239.5.1.0 ↗ | beta barrels › Ribosomal protein L25-like › 40S ribosomal protein S3A N-terminal domain › 40S ribosomal protein S3A N-terminal domain | 0.67 | 46.0 | 4.23e-01 | 73.1% | 55.7% |
| 4341865 | 4325.1.1.1 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 | 0.67 | 43.0 | 4.23e-01 | 73.1% | 61.8% |
| 3748189 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.66 | 45.0 | 3.94e-01 | 76.9% | 46.3% |
| 3817060 | 109.4.1.1794 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd | 0.65 | 46.0 | 2.66e-01 | 75.0% | 12.8% |
| 3370322 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.65 | 45.0 | 3.78e-01 | 76.9% | 41.1% |
| None | — | 0.65 | 51.0 | 3.14e-01 | 88.5% | 31.5% | |
| 3360888 | 5.1.4.298 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd | 0.64 | 45.0 | 2.63e-01 | 75.0% | 11.9% |
| 3390004 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.64 | 44.0 | 3.43e-01 | 71.2% | 33.6% |
| 3831854 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.63 | 45.0 | 3.99e-01 | 76.9% | 52.0% |
| 3017675 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.63 | 44.0 | 3.91e-01 | 75.0% | 50.7% |
| 4386515 | 330.1.1.30 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF27148 | 0.63 | 43.0 | 4.04e-01 | 73.1% | 60.0% |
| 3728854 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.62 | 44.0 | 4.09e-01 | 76.9% | 58.5% |
| 1286823 | 244.4.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › NiFeSe_Hases, PF27537 | 0.62 | 43.0 | 4.34e-01 | 71.2% | 76.5% |
| 3502939 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.62 | 42.0 | 3.60e-01 | 76.9% | 41.1% |
| 1760264 | 244.4.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › NiFeSe_Hases, PF27537 | 0.62 | 42.0 | 3.61e-01 | 71.2% | 46.0% |
| 4031833 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.62 | 40.0 | 3.94e-01 | 71.2% | 58.3% |
| 3596524 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.62 | 44.0 | 3.60e-01 | 75.0% | 65.3% |
| 3784539 | 214.1.1.6 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2_2 | 0.62 | 44.0 | 3.49e-01 | 80.8% | 36.4% |
| 2979642 | 10.2.1.35 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Peptidase_A21 | 0.61 | 44.0 | 2.92e-01 | 78.8% | 32.5% |
| 3955489 | 2484.1.1.211 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605, Cas12f1-like_TNB | 0.61 | 42.0 | 2.82e-01 | 73.1% | 37.6% |
| 5021465 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 43.0 | 2.74e-01 | 76.9% | 21.1% |
| 3988802 | 6082.1.1.0 ↗ | beta sandwiches › N-terminal domain of BT_2081-like › N-terminal domain of BT_2081-like › N-terminal domain of BT_2081-like | 0.60 | 43.0 | 3.76e-01 | 76.9% | 100.0% |
| 4106397 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.60 | 42.0 | 3.78e-01 | 75.0% | 53.3% |
| 3451832 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.60 | 43.0 | 3.62e-01 | 76.9% | 48.9% |
| 3258975 | 214.1.1.6 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2_2 | 0.60 | 43.0 | 3.50e-01 | 82.7% | 40.0% |
| 4979556 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.60 | 43.0 | 2.94e-01 | 80.8% | 33.6% |
| 3514660 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.59 | 39.0 | 3.38e-01 | 76.9% | 38.9% |
| 3991800 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.59 | 45.0 | 3.83e-01 | 82.7% | 68.2% |
| 3514664 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.59 | 40.0 | 3.53e-01 | 75.0% | 45.0% |
| 5037441 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 40.0 | 3.18e-01 | 71.2% | 37.3% |
| 4583667 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.59 | 40.0 | 3.39e-01 | 71.2% | 48.9% |
| 3236101 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.58 | 40.0 | 3.28e-01 | 76.9% | 37.0% |
| 4012169 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.58 | 38.0 | 2.30e-01 | 76.9% | 8.3% |
| 3730653 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.58 | 39.0 | 3.56e-01 | 75.0% | 51.4% |
| 3788141 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.58 | 38.0 | 3.51e-01 | 76.9% | 48.0% |
| 4364336 | 375.1.1.21 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 | 0.58 | 42.0 | 4.23e-01 | 80.8% | 80.0% |
| 3801624 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.57 | 41.0 | 3.39e-01 | 76.9% | 78.0% |
| 3390821 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.57 | 39.0 | 3.47e-01 | 71.2% | 46.3% |
| 4137619 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.57 | 40.0 | 3.06e-01 | 76.9% | 53.8% |
| 5054090 | 218.1.1.2 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N | 0.56 | 41.0 | 3.23e-01 | 80.8% | 35.0% |
| 2104079 | 244.4.1.4 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › PF27537 | 0.56 | 40.0 | 4.22e-01 | 73.1% | 91.1% |
| 5044597 | 375.1.1.21 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 | 0.56 | 41.0 | 4.15e-01 | 78.8% | 82.0% |
| 3925738 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.56 | 37.0 | 3.02e-01 | 76.9% | 32.7% |
| 5026433 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 40.0 | 3.29e-01 | 80.8% | 39.0% |
| 3549045 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.55 | 38.0 | 3.07e-01 | 80.8% | 32.7% |
| 3633647 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.55 | 36.0 | 3.43e-01 | 73.1% | 53.8% |
| 4405689 | 220.1.1.228 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_PKH3_C | 0.55 | 38.0 | 2.79e-01 | 75.0% | 25.3% |
| 3283795 | 220.1.1.17 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_1 | 0.54 | 36.0 | 2.93e-01 | 71.2% | 33.0% |
| 5071336 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.54 | 40.0 | 3.14e-01 | 84.6% | 89.1% |
| 3968646 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.54 | 37.0 | 2.84e-01 | 71.2% | 33.8% |
| 3508366 | 5.1.4.492 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR35_2nd, Beta-prop_WDR35_TULP_N | 0.54 | 41.0 | 2.54e-01 | 92.3% | 25.9% |
| 4240105 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.54 | 37.0 | 3.02e-01 | 76.9% | 38.3% |
| 4413343 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.53 | 38.0 | 2.48e-01 | 78.8% | 15.9% |
| 5022726 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.53 | 38.0 | 3.88e-01 | 80.8% | 82.0% |
| 5042766 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.53 | 35.0 | 2.38e-01 | 73.1% | 14.2% |
| 5060010 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 36.0 | 3.75e-01 | 75.0% | 86.7% |
| 4024735 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.53 | 36.0 | 3.37e-01 | 73.1% | 54.3% |
| 4997648 | 375.1.1.21 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 | 0.52 | 37.0 | 3.74e-01 | 80.8% | 86.0% |
| 4140206 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.52 | 37.0 | 3.23e-01 | 78.8% | 47.1% |
| 4033846 | 884.1.1.1 ↗ | a+b two layers › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › CobW_C | 0.52 | 37.0 | 2.89e-01 | 84.6% | 31.1% |
| 3730099 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.51 | 36.0 | 3.29e-01 | 75.0% | 51.4% |
| 3727187 | 109.4.1.681 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans_2 | 0.51 | 38.0 | 2.30e-01 | 84.6% | 49.7% |
D6
medium
residues 499-552