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IMGVR_UViG_3300029311_000215-3300029311-Ga0167331_10050057
Arc-VirIMGVR_UViG_3300029311_000215-3300029311-Ga0167331_10050057
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-20_125-173
Domain cluster:
rep: MW363798.1__QQO38177.1__LSA2308_00157__00156__D112-170
D2
medium
residues 21-124
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3dliA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.76 | 71.0 | 5.32e-01 | 100.0% | 45.7% |
| 5x7fA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.72 | 68.0 | 5.34e-01 | 100.0% | 56.1% |
| 2yxlA04 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.71 | 66.0 | 5.15e-01 | 100.0% | 64.9% |
| 8c9vA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.70 | 67.0 | 5.39e-01 | 100.0% | 61.3% |
| 5ezqA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.69 | 57.0 | 4.65e-01 | 100.0% | 50.0% |
| 3gjyA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.67 | 63.0 | 4.50e-01 | 100.0% | 43.7% |
| 5h02A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.67 | 62.0 | 5.09e-01 | 100.0% | 62.9% |
| 6qmmA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.67 | 63.0 | 4.78e-01 | 100.0% | 52.1% |
| 3ocjA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.66 | 61.0 | 4.31e-01 | 100.0% | 37.0% |
| 1zjyA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.64 | 58.0 | 4.33e-01 | 99.0% | 51.8% |
| 2qe6A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 57.0 | 4.22e-01 | 100.0% | 78.6% |
| 1jbwA02 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.60 | 46.0 | 4.54e-01 | 92.3% | 75.9% |
| 5d84A01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 45.0 | 3.77e-01 | 82.7% | 78.7% |
| 2cmgA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 55.0 | 4.24e-01 | 100.0% | 49.8% |
| 5xemB01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 45.0 | 3.60e-01 | 81.7% | 75.9% |
| 1iukA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 47.0 | 4.29e-01 | 98.1% | 69.1% |
| 4j0eA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 50.0 | 3.98e-01 | 99.0% | 61.4% |
| 5i7wB01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 42.0 | 3.43e-01 | 82.7% | 75.6% |
| 6fcxA01 | 3.20.20.220 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.54 | 47.0 | 3.44e-01 | 96.2% | 53.7% |
| 3ahcA02 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.53 | 45.0 | 3.62e-01 | 96.2% | 83.9% |
| 1fy2A00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.53 | 45.0 | 3.53e-01 | 100.0% | 44.1% |
| 3votA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 45.0 | 4.56e-01 | 92.3% | 97.0% |
| 2pqmB01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 44.0 | 3.44e-01 | 93.3% | 68.7% |
| 1r6hA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.51 | 41.0 | 3.50e-01 | 96.2% | 52.9% |
| 2hcfA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.50 | 31.0 | 3.75e-01 | 85.6% | 100.0% |
| 2vk2A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.50 | 44.0 | 3.83e-01 | 99.0% | 64.8% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5002526 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.84 | 58.0 | 4.81e-01 | 89.4% | 43.5% |
| 5003398 | 2003.1.5.96 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MetW | 0.76 | 72.0 | 5.25e-01 | 100.0% | 42.5% |
| 5058446 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.75 | 55.0 | 4.81e-01 | 100.0% | 51.6% |
| 4029646 | 2003.1.5.176 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › BMT5-like | 0.73 | 67.0 | 4.91e-01 | 100.0% | 76.2% |
| 5081697 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.72 | 68.0 | 5.19e-01 | 100.0% | 47.7% |
| None | — | 0.72 | 69.0 | 5.23e-01 | 100.0% | 51.6% | |
| 1684299 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.71 | 67.0 | 5.08e-01 | 100.0% | 53.8% |
| 3647899 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.71 | 67.0 | 4.92e-01 | 100.0% | 48.4% |
| 4679091 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.71 | 67.0 | 5.06e-01 | 100.0% | 53.8% |
| 4534685 | 2003.1.5.38 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › SAM_MT | 0.71 | 66.0 | 4.86e-01 | 100.0% | 71.4% |
| 4028312 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.71 | 60.0 | 5.34e-01 | 90.4% | 87.6% |
| 5046935 | 2003.1.5.14 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_3 | 0.71 | 68.0 | 5.22e-01 | 100.0% | 54.1% |
| None | — | 0.71 | 66.0 | 5.16e-01 | 100.0% | 65.2% | |
| 3025909 | 2003.1.5.14 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_3 | 0.70 | 67.0 | 5.33e-01 | 100.0% | 59.4% |
| 4945726 | 2003.1.5.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltr_RsmB-F | 0.70 | 65.0 | 4.56e-01 | 100.0% | 43.3% |
| 3704924 | 2003.1.5.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltr_RsmB-F | 0.69 | 64.0 | 4.51e-01 | 100.0% | 44.9% |
| 4311946 | 2003.1.5.80 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_24 | 0.69 | 64.0 | 4.90e-01 | 100.0% | 55.9% |
| 3358204 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.68 | 64.0 | 4.79e-01 | 100.0% | 51.9% |
| 4029143 | 2003.1.5.176 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › BMT5-like | 0.67 | 57.0 | 4.54e-01 | 90.4% | 60.0% |
| 5082791 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.67 | 56.0 | 4.64e-01 | 100.0% | 53.1% |
| 4961790 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.67 | 61.0 | 4.61e-01 | 100.0% | 44.0% |
| 4998836 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.66 | 61.0 | 4.69e-01 | 100.0% | 52.7% |
| 3459984 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.63 | 48.0 | 4.47e-01 | 100.0% | 64.6% |
| 4954480 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.59 | 53.0 | 4.33e-01 | 100.0% | 86.2% |
| 2484371 | 2003.4.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes | 0.59 | 45.0 | 3.99e-01 | 81.7% | 98.1% |
| 3283809 | 2003.4.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP | 0.59 | 46.0 | 3.97e-01 | 82.7% | 95.0% |
| 4180643 | 7514.1.1.1 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 | 0.59 | 53.0 | 4.82e-01 | 99.0% | 92.8% |
| 3716577 | 2003.4.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP | 0.59 | 45.0 | 3.62e-01 | 81.7% | 77.1% |
| 3998859 | 2003.4.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP | 0.56 | 43.0 | 3.90e-01 | 82.7% | 87.6% |
| 3601639 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.56 | 48.0 | 3.53e-01 | 94.2% | 94.9% |
| 3821463 | 2004.1.1.33 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C,RecQ_Zn_bind | 0.54 | 46.0 | 3.67e-01 | 100.0% | 82.0% |
| 4161290 | 7588.1.1.1 ↗ | a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB | 0.53 | 46.0 | 4.54e-01 | 100.0% | 87.8% |
| 3164442 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 41.0 | 3.27e-01 | 98.1% | 41.9% |
| 3988383 | 101.1.2.8 ↗ | alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C | 0.51 | 37.0 | 3.81e-01 | 96.2% | 79.0% |
| 2099531 | 2007.2.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › DSPc | 0.51 | 39.0 | 3.33e-01 | 82.7% | 78.7% |