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IMGVR_UViG_3300029442_000182-3300029442-Ga0239579_10018971
Arc-VirIMGVR_UViG_3300029442_000182-3300029442-Ga0239579_10018971
Identity
- Kingdom:
- archaea
Quality
86.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-61
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rniA01 | 3.30.720.160 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Bifunctional DNA primase/polymerase, N-terminal | 0.65 | 56.0 | 5.17e-01 | 100.0% | 81.4% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.56 | 47.0 | 4.50e-01 | 100.0% | 92.4% |
| 3cw8X03 | 2.30.38.10 | Mainly Beta › Roll › Luciferase; domain 3 › Luciferase; Domain 3 | 0.56 | 36.0 | 3.24e-01 | 100.0% | 43.8% |
| 3tj8A02 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.52 | 40.0 | 3.65e-01 | 88.7% | 81.1% |
| 1gmuA01 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.51 | 38.0 | 3.65e-01 | 88.7% | 86.6% |
| 1earA02 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.50 | 39.0 | 3.63e-01 | 88.7% | 84.1% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4940784 | 862.1.1.3 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › Prim-Pol | 0.89 | 79.0 | 5.50e-01 | 100.0% | 32.9% |
| 3280020 | 862.1.1.3 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › Prim-Pol | 0.69 | 59.0 | 4.15e-01 | 100.0% | 32.0% |
| 3742058 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.55 | 47.0 | 2.74e-01 | 98.1% | 12.0% |
| 4472004 | 304.22.1.1 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C | 0.55 | 42.0 | 3.85e-01 | 88.7% | 77.3% |
| 4524153 | 304.22.1.1 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C | 0.54 | 41.0 | 3.56e-01 | 84.9% | 78.8% |
| 3666791 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 41.0 | 4.19e-01 | 86.8% | 100.0% |
| 5293 | 304.22.1.1 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C | 0.53 | 41.0 | 3.86e-01 | 88.7% | 85.3% |
| 3227731 | 10.12.1.101 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › JmjC, Cupin_8 | 0.53 | 39.0 | 2.39e-01 | 81.1% | 95.9% |
| 3915794 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 43.0 | 3.57e-01 | 100.0% | 54.5% |
| 3786228 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.52 | 42.0 | 4.06e-01 | 90.6% | 85.0% |
| 5010050 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 41.0 | 3.47e-01 | 100.0% | 62.9% |