←Back to structures
IMGVR_UViG_3300029502_000068-3300029502-Ga0244223_1027699
Arc-VirIMGVR_UViG_3300029502_000068-3300029502-Ga0244223_1027699
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 50-141
Domain cluster:
rep: KY554777.1__ARM67710.1__LW81_140__00140__D72-152
D2
medium
residues 142-272
Domain cluster:
rep: SRR1747018_scaffold_13_prodigal-single.1__X__X__00219__D103-206
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4lq0A01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.77 | 62.0 | 6.05e-01 | 84.7% | 81.9% |
| 4efjA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.75 | 60.0 | 5.90e-01 | 84.7% | 78.6% |
| 2ab5A02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.70 | 61.0 | 6.05e-01 | 93.9% | 94.0% |
| 3mahA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 32.0 | 4.16e-01 | 71.8% | 90.0% |
| 2cw8A03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.57 | 49.0 | 4.46e-01 | 90.8% | 89.9% |
| 3bjnA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.52 | 33.0 | 3.07e-01 | 90.8% | 49.4% |
| 3jamK00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 35.0 | 4.02e-01 | 76.3% | 95.8% |
| 2q2eB01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.51 | 38.0 | 3.30e-01 | 79.4% | 87.3% |
| 6iy8A01 | 3.30.1380.20 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 | 0.51 | 37.0 | 3.35e-01 | 75.6% | 88.9% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5030027 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.88 | 73.0 | 7.35e-01 | 85.5% | 92.3% |
| 4561853 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.81 | 59.0 | 6.53e-01 | 77.1% | 93.3% |
| 4509301 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.81 | 61.0 | 5.69e-01 | 78.6% | 70.0% |
| 5027649 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.79 | 64.0 | 6.69e-01 | 84.0% | 100.0% |
| 3271803 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.79 | 57.0 | 6.27e-01 | 75.6% | 92.4% |
| 3177415 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.79 | 58.0 | 6.31e-01 | 76.3% | 90.9% |
| 3950413 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.78 | 63.0 | 6.84e-01 | 86.3% | 100.0% |
| 4237486 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.78 | 60.0 | 5.67e-01 | 80.2% | 69.7% |
| 4131749 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.78 | 60.0 | 6.47e-01 | 79.4% | 100.0% |
| 4943293 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.78 | 63.0 | 6.87e-01 | 84.7% | 100.0% |
| 4980064 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.77 | 65.0 | 5.89e-01 | 88.5% | 80.0% |
| 4084747 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.76 | 64.0 | 4.72e-01 | 89.3% | 45.9% |
| 4939276 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.75 | 62.0 | 6.58e-01 | 86.3% | 100.0% |
| 5013813 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.74 | 62.0 | 5.91e-01 | 88.5% | 87.3% |
| 3206013 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.73 | 62.0 | 6.04e-01 | 88.5% | 85.0% |
| 5551 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.73 | 61.0 | 6.23e-01 | 89.3% | 93.8% |
| 3206671 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.72 | 60.0 | 6.05e-01 | 88.5% | 90.0% |
| 2092599 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.71 | 60.0 | 5.76e-01 | 89.3% | 79.6% |
| 4354369 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.69 | 54.0 | 5.82e-01 | 87.0% | 96.4% |
| 4389430 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.69 | 55.0 | 5.92e-01 | 87.8% | 99.1% |
| 4580140 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.69 | 44.0 | 5.32e-01 | 75.6% | 100.0% |
| 4626502 | 242.1.1.6 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA | 0.69 | 55.0 | 5.68e-01 | 89.3% | 88.8% |
| 3174942 | 242.1.1.3 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › Hom_end | 0.64 | 52.0 | 5.42e-01 | 85.5% | 97.5% |
| 4574941 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.63 | 49.0 | 5.33e-01 | 81.7% | 99.1% |
| 3308403 | 601.23.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III | 0.59 | 33.0 | 2.49e-01 | 74.0% | 20.9% |
| 1738597 | 216.1.1.1 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UQ_con | 0.57 | 22.0 | 2.88e-01 | 70.2% | 58.9% |
| 4024840 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.54 | 38.0 | 3.80e-01 | 71.8% | 91.1% |
| 3714935 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 39.0 | 3.67e-01 | 73.3% | 91.0% |
| 4944543 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 39.0 | 3.72e-01 | 73.3% | 90.0% |
| 4276523 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.53 | 35.0 | 4.14e-01 | 86.3% | 98.9% |
| 3315173 | 243.3.1.46 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › SWIM | 0.51 | 34.0 | 3.64e-01 | 74.0% | 76.5% |