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IMGVR_UViG_3300029589_000028-3300029589-Ga0245106_10125624
Arc-VirIMGVR_UViG_3300029589_000028-3300029589-Ga0245106_10125624
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-55
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1svuA02 | 3.90.120.10 | Alpha Beta › Alpha-Beta Complex › DNA Methylase; Chain A, domain 2 › DNA Methylase, subunit A, domain 2 | 0.81 | 74.0 | 6.00e-01 | 100.0% | 88.8% |
| 4dkjA02 | 3.90.120.10 | Alpha Beta › Alpha-Beta Complex › DNA Methylase; Chain A, domain 2 › DNA Methylase, subunit A, domain 2 | 0.75 | 68.0 | 5.68e-01 | 100.0% | 89.1% |
| 3s95A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 36.0 | 3.14e-01 | 70.9% | 96.6% |
| 3qwnA02 | 2.60.40.2370 | Mainly Beta › Sandwich › Immunoglobulin-like › NigD-like, C-terminal beta sandwich domain | 0.52 | 42.0 | 3.34e-01 | 98.2% | 97.8% |
| 7cyiD01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 37.0 | 2.93e-01 | 81.8% | 84.5% |
| 4dw4B00 | 3.90.730.10 | Alpha Beta › Alpha-Beta Complex › Ribonuclease Rh; Chain A › Ribonuclease T2-like | 0.52 | 36.0 | 2.66e-01 | 94.5% | 25.8% |
| 6eqoA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 38.0 | 2.71e-01 | 85.5% | 84.7% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4222649 | 2003.1.5.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DNA_methylase | 0.85 | 78.0 | 4.61e-01 | 100.0% | 24.3% |
| 4940288 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.59 | 48.0 | 2.89e-01 | 90.9% | 43.3% |
| 4948557 | 2002.1.1.101 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Orn_Arg_deC_N | 0.55 | 40.0 | 2.57e-01 | 80.0% | 100.0% |
D2
medium
residues 56-110
Domain cluster:
rep: IMGVR_UViG_3300025014_000214-3300025014-Ga0210023_100002729__D116-168
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00145.24 best | DNA_methylase | 47.8 | 2.00e-12 | 90.9% | 13.9% |