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IMGVR_UViG_3300029589_000028-3300029589-Ga0245106_1012564

Arc-Vir

IMGVR_UViG_3300029589_000028-3300029589-Ga0245106_1012564

Quality

84.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-108
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13306.13 best LRR_5 45.0 1.30e-11 89.8% 64.6%
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4gt6A00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.83 79.0 5.24e-01 100.0% 36.9%
4ojuA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.82 79.0 7.03e-01 100.0% 88.0%
4h09D00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.82 77.0 5.12e-01 100.0% 36.6%
3sb4A01 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.80 75.0 6.21e-01 99.1% 90.9%
4fs7A00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.79 75.0 4.97e-01 100.0% 38.4%
4fd0A02 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.79 73.0 5.15e-01 99.1% 59.9%
1xwdC00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.75 68.0 5.18e-01 98.1% 61.6%
2id5A01 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.75 66.0 4.46e-01 94.4% 42.1%
3sb4A02 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.74 68.0 6.02e-01 99.1% 87.6%
1w8aA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.73 64.0 5.28e-01 95.4% 82.5%
2xwtC00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.72 66.0 5.04e-01 98.1% 66.7%
4rcwA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.71 63.0 4.85e-01 95.4% 67.9%
4xsqB00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.71 61.0 5.12e-01 92.6% 82.7%
1gwbA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.71 62.0 4.63e-01 95.4% 63.4%
3wpcA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.71 62.0 3.73e-01 95.4% 18.2%
4bsrB01 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.71 64.0 4.17e-01 98.1% 27.1%
1xkuA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.69 62.0 4.43e-01 97.2% 49.5%
3zyiA01 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.69 62.0 4.46e-01 99.1% 42.6%
2lz0A00 3.40.50.12480 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.68 53.0 5.51e-01 82.4% 93.0%
1k8fA00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.67 61.0 5.37e-01 100.0% 82.8%
4nzrM02 2.160.20.180 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.66 57.0 4.75e-01 94.4% 72.8%
4ezgA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.65 58.0 4.93e-01 100.0% 76.2%
1hkuA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.65 48.0 4.49e-01 76.9% 99.2%
2ra8A02 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.65 57.0 4.27e-01 98.1% 57.1%
4nkhE00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.64 54.0 4.16e-01 90.7% 53.6%
4mxnB00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.64 57.0 4.51e-01 100.0% 94.7%
7d27A02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.52 43.0 3.47e-01 92.6% 56.1%
4c9vA00 3.50.30.30 Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › 0.52 36.0 3.48e-01 72.2% 61.6%
1qo0D01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 37.0 3.59e-01 77.8% 89.8%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2576217 207.1.1.21 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 0.86 79.0 6.10e-01 96.3% 65.4%
1281127 207.1.1.21 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 0.84 80.0 6.72e-01 100.0% 88.8%
1297113 207.1.1.21 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 0.82 79.0 7.01e-01 100.0% 87.4%
1295939 207.1.1.21 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 0.82 77.0 5.12e-01 100.0% 36.6%
1281087 207.1.1.21 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 0.79 75.0 4.97e-01 100.0% 38.4%
4148563 207.1.1.21 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 0.78 73.0 4.64e-01 100.0% 36.6%
5033803 207.1.1.21 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 0.77 73.0 5.61e-01 100.0% 75.0%
3930948 207.1.1.55 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 0.77 70.0 5.18e-01 98.1% 58.5%
3563572 207.1.1.176 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_5, LRR_8 0.76 67.0 4.41e-01 94.4% 43.3%
1600195 207.1.1.21 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 0.75 70.0 5.56e-01 100.0% 91.8%
1255240 207.1.1.141 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5, LRR_8 0.75 67.0 4.51e-01 97.2% 50.3%
3995585 207.1.1.141 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5, LRR_8 0.75 67.0 5.30e-01 97.2% 79.1%
None 0.75 66.0 4.22e-01 94.4% 32.3%
None 0.74 69.0 4.52e-01 99.1% 31.8%
3901019 207.1.1.130 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 0.74 68.0 4.49e-01 99.1% 31.3%
3759653 207.1.1.24 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 0.74 66.0 3.93e-01 95.4% 20.7%
3216099 207.1.1.21 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 0.73 66.0 5.04e-01 98.1% 86.7%
3775818 207.1.1.141 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5, LRR_8 0.73 66.0 4.80e-01 97.2% 53.9%
142604 207.1.1.21 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 0.72 66.0 5.04e-01 98.1% 66.7%
2325379 207.1.1.130 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 0.72 65.0 4.27e-01 98.1% 28.7%
3509730 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.72 65.0 4.27e-01 100.0% 37.8%
4228624 207.1.1.184 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRRNT, LRR_5, LRR_8 0.71 63.0 4.54e-01 95.4% 49.8%
4851734 2004.1.1.565 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › LRR_1, LRR_8 0.71 63.0 5.39e-01 95.4% 78.9%
3670817 207.1.1.95 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 0.71 62.0 4.10e-01 95.4% 36.8%
4612065 207.1.1.68 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRRNT,LRR_5 0.71 64.0 4.62e-01 99.1% 58.3%
3586542 207.1.1.21 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 0.71 64.0 5.18e-01 99.1% 76.0%
4152533 207.1.1.55 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 0.70 63.0 4.65e-01 97.2% 57.0%
4099996 207.1.1.200 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRRNT, GnHR_trans, LRR_5 0.70 64.0 4.51e-01 100.0% 53.3%
3681930 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.69 61.0 3.70e-01 95.4% 29.0%
4875721 207.1.1.130 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 0.69 61.0 4.92e-01 97.2% 58.1%
3922779 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.69 61.0 4.66e-01 97.2% 95.6%
3615230 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.68 62.0 4.65e-01 99.1% 63.8%
3461421 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.68 61.0 5.30e-01 99.1% 96.4%
184833 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.68 53.0 5.51e-01 82.4% 93.0%
3326661 207.1.1.95 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 0.68 59.0 4.19e-01 95.4% 49.8%
3612599 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.67 62.0 4.59e-01 100.0% 61.5%
3345981 207.1.1.95 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 0.67 60.0 3.82e-01 98.1% 28.6%
4328381 207.1.1.144 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4 0.67 59.0 4.20e-01 96.3% 52.6%
3613530 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.67 61.0 4.53e-01 100.0% 62.6%
3253465 207.1.1.12 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP 0.67 59.0 3.73e-01 96.3% 28.0%
3261780 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.67 60.0 4.36e-01 99.1% 46.8%
3272941 207.1.1.12 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP 0.67 61.0 3.82e-01 100.0% 30.4%
5046263 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.67 59.0 4.19e-01 98.1% 49.3%
3450387 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.66 58.0 4.52e-01 97.2% 97.9%
3304084 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.66 58.0 4.01e-01 97.2% 41.3%
3201342 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.66 60.0 5.47e-01 100.0% 95.0%
3360863 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.66 59.0 3.99e-01 98.1% 36.2%
3716275 207.1.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6 0.66 58.0 4.28e-01 98.1% 76.9%
3265473 207.1.1.12 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP 0.66 58.0 3.73e-01 98.1% 29.0%
3371597 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.65 58.0 4.14e-01 97.2% 43.7%
3265630 207.1.1.12 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP 0.65 58.0 4.85e-01 99.1% 63.2%
3614648 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.65 57.0 4.73e-01 97.2% 66.7%
3346817 207.1.1.96 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At1g61320_AtMIF1 0.64 58.0 4.26e-01 100.0% 50.0%
3832705 207.8.1.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD,SufBD_N 0.64 58.0 3.86e-01 100.0% 68.4%
3790326 207.1.1.24 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 0.64 57.0 4.15e-01 98.1% 46.4%
3325917 207.1.1.103 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_R13L1-DRL21 0.64 57.0 4.45e-01 100.0% 67.5%
1121177 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.64 57.0 4.51e-01 100.0% 94.7%
3809405 207.1.1.77 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBD 0.63 56.0 4.62e-01 100.0% 70.2%
3249016 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.62 56.0 4.45e-01 100.0% 70.5%
3442531 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.62 54.0 4.23e-01 97.2% 50.8%