←Back to structures
IMGVR_UViG_3300029589_000301-3300029589-Ga0245106_1009301
Arc-VirIMGVR_UViG_3300029589_000301-3300029589-Ga0245106_1009301
Identity
- Kingdom:
- archaea
Quality
80.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 4-95
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2o38A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.68 | 30.0 | 3.58e-01 | 93.5% | 60.0% |
| 1r69A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.59 | 32.0 | 3.82e-01 | 70.7% | 77.8% |
| 3hh0A01 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.57 | 41.0 | 4.52e-01 | 90.2% | 94.4% |
| 5i41B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.57 | 39.0 | 4.46e-01 | 89.1% | 97.0% |
| 2hpiA03 | 1.10.10.1600 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Bacterial DNA polymerase III alpha subunit, thumb domain | 0.56 | 33.0 | 3.65e-01 | 76.1% | 74.6% |
| 1ku3A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 32.0 | 3.86e-01 | 89.1% | 86.9% |
| 1r8eA02 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.54 | 40.0 | 4.47e-01 | 94.6% | 100.0% |
| 4q28A00 | 3.30.160.780 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 39.0 | 3.70e-01 | 80.4% | 97.3% |
| 4pu7A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.51 | 34.0 | 3.81e-01 | 73.9% | 87.3% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4537353 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.60 | 33.0 | 2.97e-01 | 70.7% | 40.0% |
| 4547937 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.57 | 35.0 | 4.38e-01 | 92.4% | 100.0% |
| 3954117 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.57 | 40.0 | 4.15e-01 | 72.8% | 78.8% |
| 3281256 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.56 | 40.0 | 4.24e-01 | 73.9% | 85.0% |
| 148652 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.56 | 37.0 | 3.78e-01 | 80.4% | 69.7% |
| 3290900 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.52 | 43.0 | 3.82e-01 | 95.7% | 63.1% |
| 3284505 | 101.1.9.36 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR | 0.51 | 42.0 | 3.94e-01 | 95.7% | 72.2% |
| 3943313 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.50 | 44.0 | 4.06e-01 | 94.6% | 80.0% |
D2
medium
residues 98-195
Domain cluster:
rep: IMGVR_UViG_3300029589_000301-3300029589-Ga0245106_1009301__D4-95