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IMGVR_UViG_3300029594_000217-3300029594-Ga0245142_10029753

Arc-Vir

IMGVR_UViG_3300029594_000217-3300029594-Ga0245142_10029753

Quality

92.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-111
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF27370.1 best MJ0788 29.1 1.30e-06 71.7% 94.6%
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3u97A00 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.75 53.0 6.05e-01 79.2% 100.0%
3q90B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 53.0 4.93e-01 86.8% 90.0%
3nv0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 57.0 4.67e-01 96.2% 91.8%
3f8xB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 53.0 4.91e-01 86.8% 84.8%
3fljA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 52.0 4.77e-01 86.8% 76.6%
3robA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 52.0 4.85e-01 85.8% 94.7%
3fh1A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 52.0 4.97e-01 86.8% 98.4%
3dxoB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 52.0 5.08e-01 86.8% 100.0%
1jkgB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 57.0 4.81e-01 99.1% 88.9%
1tp6A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 51.0 4.85e-01 85.8% 100.0%
3ke7B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 52.0 4.82e-01 87.7% 88.0%
3bb9B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 50.0 4.76e-01 84.9% 97.6%
5bkaE01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 51.0 4.77e-01 86.8% 97.0%
5evhA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 50.0 4.82e-01 85.8% 88.4%
2qiyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 51.0 4.74e-01 88.7% 97.8%
5tgnA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 50.0 5.02e-01 85.8% 98.2%
2gxfA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 49.0 4.74e-01 83.0% 97.5%
5aigA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 49.0 4.70e-01 84.9% 91.9%
7c5wA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 49.0 4.46e-01 85.8% 100.0%
3er7B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 48.0 4.62e-01 84.0% 96.7%
3ecfA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 50.0 4.71e-01 87.7% 85.2%
3q0xA01 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.61 45.0 3.98e-01 77.4% 86.5%
2bmoB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 49.0 4.07e-01 87.7% 77.8%
7c5yA02 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 47.0 4.22e-01 85.8% 100.0%
3soyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 52.0 4.78e-01 98.1% 95.8%
3hx8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 52.0 4.92e-01 100.0% 96.9%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 45.0 4.11e-01 84.9% 87.9%
1jmxA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.57 46.0 4.59e-01 85.8% 85.3%
3a46A01 3.20.190.10 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal 0.57 46.0 4.23e-01 86.8% 87.5%
2w20B01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.56 51.0 3.46e-01 100.0% 32.4%
1pzdA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.56 35.0 3.48e-01 84.0% 57.4%
6p3lA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 51.0 4.99e-01 100.0% 98.3%
2mj7A00 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.56 33.0 3.08e-01 84.0% 44.0%
4pj2A00 2.40.128.460 Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme 0.56 47.0 4.52e-01 90.6% 90.9%
3rbyA02 2.40.128.310 Mainly Beta › Beta Barrel › Lipocalin › Protein HRI1, C-terminal domain 0.56 31.0 3.26e-01 84.9% 60.0%
3a58A01 2.30.29.90 Mainly Beta › Roll › PH-domain like › 0.55 49.0 4.20e-01 99.1% 82.8%
2b4wA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.55 49.0 3.54e-01 97.2% 48.1%
2qe8A00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.55 49.0 3.45e-01 99.1% 51.3%
1cbiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 41.0 3.82e-01 83.0% 91.2%
3djwA00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 42.0 4.38e-01 84.0% 98.9%
4esqA00 3.40.1000.70 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain 0.53 41.0 3.39e-01 83.0% 68.0%
3bdrA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 42.0 3.74e-01 86.8% 87.2%
4l9cA00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.52 38.0 3.39e-01 87.7% 53.3%
2fwvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 42.0 3.50e-01 89.6% 73.2%
2il5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 32.0 2.80e-01 81.1% 40.7%
2lfuA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.50 40.0 3.76e-01 86.8% 77.5%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5021930 4312.1.1.22 a+b two layers › RelE-like › RelE-like › RelE-like › PF27370 0.89 77.0 7.97e-01 89.6% 98.0%
4992522 4312.1.1.15 a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.80 57.0 6.59e-01 82.1% 100.0%
4987659 4312.1.1.15 a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.77 62.0 6.72e-01 85.8% 100.0%
4968653 4312.1.1.15 a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.77 64.0 6.74e-01 87.7% 100.0%
4998648 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.76 60.0 6.33e-01 84.0% 100.0%
4968133 4312.1.1.1 a+b two layers › RelE-like › RelE-like › RelE-like › BrnT_toxin 0.75 62.0 6.56e-01 91.5% 98.9%
5061264 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.71 51.0 5.82e-01 76.4% 100.0%
4330393 243.3.1.23 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3027 0.69 50.0 5.48e-01 97.2% 90.9%
3613814 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.67 55.0 5.05e-01 88.7% 96.4%
3278065 4312.1.1.4 a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.66 51.0 5.11e-01 82.1% 83.6%
3282412 4312.1.1.4 a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.66 51.0 4.88e-01 82.1% 78.9%
3189800 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.66 53.0 4.76e-01 85.8% 97.9%
3219430 243.1.1.75 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 0.66 53.0 5.24e-01 87.7% 97.4%
3479831 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.65 53.0 4.58e-01 87.7% 78.8%
3723969 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.64 55.0 4.80e-01 93.4% 85.6%
3219433 243.1.1.75 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 0.64 52.0 4.97e-01 87.7% 89.6%
3698372 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.62 55.0 5.02e-01 97.2% 89.3%
4596146 243.1.1.104 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Imm-NTF2 0.62 49.0 4.61e-01 84.9% 95.4%
4611698 9.1.1.28 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Pallilysin 0.61 50.0 4.64e-01 86.8% 76.2%
4946507 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.60 40.0 4.56e-01 85.8% 94.7%
3286756 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.60 47.0 4.66e-01 84.9% 95.6%
3182122 267.1.1.0 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.60 43.0 3.77e-01 76.4% 88.5%
3207118 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.59 53.0 3.48e-01 99.1% 59.8%
4014565 5.1.5.128 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_NUP159_NUP214 0.59 49.0 3.24e-01 89.6% 93.0%
3762411 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.59 44.0 3.50e-01 79.2% 83.6%
3939595 5.1.5.88 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Nucleoporin_N 0.59 50.0 3.16e-01 91.5% 88.7%
3582816 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.58 52.0 4.85e-01 100.0% 88.8%
4679328 389.2.1.0 few secondary structure elements › EGF-like › Serine protease inhibitors › Serine protease inhibitors 0.58 37.0 4.39e-01 83.0% 97.1%
2632036 243.1.1.26 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.58 51.0 4.67e-01 96.2% 93.5%
4240482 5.1.4.298 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd 0.58 51.0 3.36e-01 96.2% 41.4%
3415678 708.1.1.4 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.58 35.0 4.28e-01 82.1% 95.6%
3247589 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.57 51.0 4.78e-01 100.0% 94.0%
3342641 708.1.1.9 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › CG-1 0.57 42.0 3.90e-01 78.3% 70.7%
3395041 5.1.4.271 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30361 0.57 52.0 3.49e-01 100.0% 29.1%
3459135 9.3.1.0 beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like 0.57 47.0 4.67e-01 89.6% 86.4%
4006548 331.19.1.2 a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains › RnlA_toxin_N 0.57 35.0 3.70e-01 83.0% 68.4%
4352445 5.1.4.271 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30361 0.57 52.0 3.49e-01 100.0% 29.5%
4661496 5.1.4.37 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 0.56 51.0 3.17e-01 98.1% 29.6%
3875861 5.1.4.146 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 50.0 3.29e-01 98.1% 41.5%
3579354 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.56 44.0 4.41e-01 84.0% 80.0%
3554889 5.1.3.251 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF28327 0.56 49.0 3.33e-01 94.3% 37.5%
3629304 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.56 44.0 3.11e-01 85.8% 91.0%
3643256 708.1.1.9 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › CG-1 0.56 40.0 3.86e-01 76.4% 80.0%
5039380 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 48.0 3.36e-01 95.3% 39.1%
5037697 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.55 40.0 3.09e-01 84.0% 34.3%
1390080 220.1.1.32 beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind 0.55 49.0 4.12e-01 99.1% 77.8%
3598913 267.1.1.0 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.55 43.0 3.34e-01 84.0% 88.3%
3500264 5.1.3.69 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › TFIIIC_delta 0.55 50.0 3.37e-01 99.1% 48.7%
3261814 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.55 47.0 3.37e-01 95.3% 51.4%
4014129 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 49.0 3.24e-01 98.1% 47.9%
3988719 12.3.1.21 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hyd_65N_2 0.55 42.0 3.17e-01 80.2% 84.4%
3474375 5.1.3.69 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › TFIIIC_delta 0.54 49.0 3.51e-01 99.1% 53.2%
5036898 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.54 37.0 3.43e-01 72.6% 83.3%
3246316 9.1.1.12 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd 0.54 42.0 3.54e-01 86.8% 81.3%
3401205 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 46.0 3.06e-01 96.2% 32.6%
4862662 5.1.4.36 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.53 46.0 3.26e-01 97.2% 37.4%
3713198 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.53 39.0 3.51e-01 78.3% 66.5%
3625309 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 34.0 3.27e-01 91.5% 55.8%
3396063 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.53 39.0 2.81e-01 79.2% 45.8%
None 0.52 45.0 3.23e-01 98.1% 56.7%
3716012 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 46.0 3.15e-01 99.1% 44.1%
3214371 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.52 41.0 2.93e-01 86.8% 85.1%
3475493 5.1.4.78 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › TFIIIC_delta 0.51 47.0 2.99e-01 100.0% 35.7%
3215377 5.1.4.62 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN 0.51 46.0 3.17e-01 99.1% 60.8%
3738198 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 44.0 3.02e-01 93.4% 39.5%
4025559 5.1.4.74 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N 0.51 46.0 3.11e-01 98.1% 28.6%
4029623 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.50 44.0 2.81e-01 97.2% 37.4%