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IMGVR_UViG_3300029618_000337-3300029618-Ga0245134_100024107

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300029618_000337-3300029618-Ga0245134_100024107 ↗
Kingdom:: archaea

Quality

54.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-80

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3di2A00	1.20.1250.50	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; ›	0.62	51.0	4.49e-01	100.0%	61.7%
2pbiA02	1.10.1240.60	Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 ›	0.61	43.0	4.04e-01	75.0%	73.3%
1ivhA01	1.10.540.10	Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain	0.57	43.0	3.78e-01	81.2%	92.6%
2qqyA00	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.56	41.0	3.46e-01	78.8%	81.2%
6eoaA00	3.40.50.1950	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavin prenyltransferase-like	0.56	47.0	3.62e-01	96.2%	66.3%
2e4uA02	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.53	41.0	3.30e-01	86.3%	80.9%
1zjcA01	3.40.1830.10	Alpha Beta › 3-Layer(aba) Sandwich › Thermophilic metalloprotease-like › Thermophilic metalloprotease (M29)	0.51	42.0	3.37e-01	95.0%	100.0%
4gmqA00	1.10.8.840	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ribosome-associated complex head domain	0.51	40.0	3.87e-01	100.0%	75.0%
3gwlA00	1.20.120.310	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain	0.50	38.0	3.56e-01	83.7%	91.5%
7xxiA01	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.50	43.0	3.03e-01	100.0%	93.4%
1g8pA01	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.50	39.0	3.02e-01	87.5%	89.9%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3776643	197.1.1.1 ↗	alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › FERM_M	0.59	51.0	4.64e-01	98.8%	90.0%
3735900	109.4.1.1319 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans, PF31024	0.57	42.0	2.58e-01	78.8%	80.0%
5049073	5050.1.1.10 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_2	0.54	48.0	3.55e-01	100.0%	87.4%
5045720	7014.1.1.2 ↗	alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › TauE	0.53	39.0	3.45e-01	77.5%	85.7%
3382990	109.3.1.188 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF28568	0.53	43.0	2.98e-01	90.0%	44.7%
5053428	2002.1.1.83 ↗	a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1	0.51	41.0	2.71e-01	93.8%	59.9%
5001267	5050.1.1.9 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1	0.50	43.0	3.28e-01	100.0%	83.4%

D2 high residues 101-189

PDB