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IMGVR_UViG_3300029664_000016-3300029664-Ga0245211_10107718
Arc-VirIMGVR_UViG_3300029664_000016-3300029664-Ga0245211_10107718
Identity
- Kingdom:
- archaea
Quality
79.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-121
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF25731.2 best | crAss_MUZ | 93.4 | 1.50e-26 | 100.0% | 8.9% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1kiaA01 | 3.30.46.10 | Alpha Beta › 2-Layer Sandwich › Glycine N-methyltransferase; chain A, domain 1 › Glycine N-methyltransferase, chain A, domain 1 | 0.62 | 25.0 | 2.98e-01 | 72.5% | 53.0% |
| 2lexA00 | 2.20.25.80 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain | 0.62 | 26.0 | 3.55e-01 | 94.2% | 74.6% |
| 2retA00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.61 | 29.0 | 3.40e-01 | 95.0% | 61.9% |
| 3ua3A03 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.59 | 49.0 | 4.14e-01 | 90.0% | 84.7% |
| 4g56A03 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.57 | 47.0 | 4.20e-01 | 90.0% | 84.8% |
| 7nitA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 40.0 | 4.11e-01 | 74.2% | 75.7% |
| 5h4cB00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 38.0 | 3.65e-01 | 75.8% | 60.0% |
| 1g6q102 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.56 | 46.0 | 4.07e-01 | 90.8% | 97.3% |
| 7alkA01 | 2.60.40.3510 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 45.0 | 4.11e-01 | 90.0% | 67.5% |
| 2wanA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 34.0 | 3.60e-01 | 75.8% | 73.5% |
| 5m59A06 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.53 | 41.0 | 4.26e-01 | 88.3% | 88.4% |
| 8alzB04 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.52 | 40.0 | 4.21e-01 | 88.3% | 90.9% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5033505 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 42.0 | 4.41e-01 | 75.8% | 71.8% |
| 5043304 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.63 | 45.0 | 4.54e-01 | 86.7% | 74.2% |
| 5040446 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.61 | 45.0 | 4.76e-01 | 81.7% | 86.7% |
| 4954298 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.59 | 33.0 | 3.70e-01 | 90.0% | 69.5% |
| 3940688 | 3698.1.1.1 ↗ | beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › PRMT5_C | 0.59 | 49.0 | 3.99e-01 | 90.8% | 91.7% |
| 3910669 | 3698.1.1.2 ↗ | beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › PRMT_C | 0.58 | 48.0 | 4.04e-01 | 90.0% | 77.6% |
| 4340834 | 3698.1.1.0 ↗ | beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain | 0.58 | 48.0 | 4.93e-01 | 90.0% | 94.8% |
| 4952678 | 3698.1.1.0 ↗ | beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain | 0.58 | 48.0 | 4.89e-01 | 90.0% | 94.2% |
| 3623655 | 3698.1.1.0 ↗ | beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain | 0.58 | 48.0 | 4.16e-01 | 90.0% | 83.7% |
| 3496958 | 3698.1.1.0 ↗ | beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain | 0.58 | 48.0 | 4.14e-01 | 90.8% | 82.1% |
| 3504766 | 3698.1.1.1 ↗ | beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › PRMT5_C | 0.58 | 48.0 | 4.30e-01 | 90.0% | 85.3% |
| None | — | 0.58 | 48.0 | 3.13e-01 | 90.8% | 40.1% | |
| 3403898 | 3698.1.1.1 ↗ | beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › PRMT5_C | 0.58 | 47.0 | 4.31e-01 | 90.0% | 84.8% |
| 3175941 | 3698.1.1.1 ↗ | beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › PRMT5_C | 0.57 | 47.0 | 3.96e-01 | 90.0% | 83.8% |
| 3736374 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.57 | 47.0 | 3.06e-01 | 90.0% | 33.0% |
| 3602292 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.57 | 32.0 | 3.56e-01 | 90.0% | 69.5% |
| 4604718 | 330.6.1.0 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain | 0.57 | 27.0 | 3.09e-01 | 92.5% | 58.9% |
| 3646611 | 222.1.1.2 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › Acyl-ACP_TE | 0.55 | 31.0 | 2.75e-01 | 97.5% | 38.9% |
| 3505820 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 36.0 | 4.11e-01 | 78.3% | 88.9% |
| 3830168 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 42.0 | 3.97e-01 | 84.2% | 66.7% |
| 3509590 | 11.1.1.41 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C | 0.53 | 38.0 | 3.46e-01 | 77.5% | 55.6% |
| 3587151 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.53 | 29.0 | 2.95e-01 | 99.2% | 53.3% |
| 3498166 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 37.0 | 4.00e-01 | 84.2% | 89.0% |
| 3953439 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 27.0 | 3.22e-01 | 86.7% | 80.0% |
D2
high
residues 159-236
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hrzC01 | 2.20.210.20 | Mainly Beta › Single Sheet › ubp-family deubiquitinating enzyme fold › | 0.53 | 32.0 | 3.75e-01 | 88.5% | 95.9% |
| 1ffvC03 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.51 | 30.0 | 2.74e-01 | 70.5% | 39.5% |
| 4pofA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.50 | 31.0 | 3.64e-01 | 84.6% | 98.0% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3602943 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 32.0 | 3.74e-01 | 84.6% | 94.0% |
| 4991294 | 375.1.1.58 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MCM_OB | 0.53 | 33.0 | 3.92e-01 | 84.6% | 98.0% |
| 5016960 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 30.0 | 3.65e-01 | 71.8% | 100.0% |
| 4930203 | 375.1.1.58 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MCM_OB | 0.51 | 33.0 | 3.80e-01 | 87.2% | 96.4% |
| 3594031 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.50 | 34.0 | 3.87e-01 | 84.6% | 98.2% |
D3
medium
residues 237-313