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IMGVR_UViG_3300029716_000336-3300029716-Ga0245260_10056733

Arc-Vir

IMGVR_UViG_3300029716_000336-3300029716-Ga0245260_10056733

Identity

Kingdom:
archaea

Quality

86.6 mean pLDDT

Cluster

View cluster (17 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-25_30-111
PDB
Domain cluster: rep: OK896991.1__UDY80742.1__X__00073__D5-103
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02452.24 best PemK_toxin 80.1 1.90e-22 100.0% 96.3%
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ne8A00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.92 89.0 8.29e-01 100.0% 90.5%
5uctB00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.87 80.0 7.97e-01 100.0% 94.0%
5hk0B00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.86 82.0 7.97e-01 100.0% 92.5%
1m1fB00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.83 79.0 7.75e-01 100.0% 95.2%
1ub4A00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.82 73.0 7.27e-01 100.0% 90.3%
3jscA00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.81 70.0 7.17e-01 100.0% 93.8%
4rmoA00 3.10.129.130 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › 0.77 70.0 6.01e-01 100.0% 82.5%
4atoA00 3.10.129.130 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › 0.71 65.0 5.38e-01 100.0% 76.8%
4glkA00 3.10.129.130 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › 0.67 60.0 5.07e-01 100.0% 81.2%
2xdbA00 3.10.129.130 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › 0.66 59.0 5.05e-01 100.0% 84.0%
3by7E00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 42.0 4.67e-01 94.9% 97.4%
2kdsA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 36.0 3.82e-01 97.0% 76.7%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.53 36.0 4.04e-01 92.9% 90.9%
2y7bA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 36.0 3.30e-01 74.7% 91.8%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4667326 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.94 91.0 8.50e-01 100.0% 91.3%
1109151 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.92 89.0 8.20e-01 100.0% 87.5%
2643543 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.92 89.0 8.12e-01 100.0% 89.3%
2125775 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.89 78.0 7.68e-01 100.0% 86.5%
2046239 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.87 80.0 7.97e-01 100.0% 94.0%
3290144 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.87 67.0 7.42e-01 84.8% 97.5%
4645229 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.87 83.0 8.00e-01 100.0% 92.7%
5045554 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.87 82.0 7.64e-01 100.0% 89.1%
3951374 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.86 81.0 7.94e-01 100.0% 92.4%
2832038 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.86 82.0 7.71e-01 100.0% 88.7%
4950222 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.86 82.0 7.86e-01 100.0% 92.7%
3955085 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.86 79.0 7.96e-01 100.0% 96.0%
1952922 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.86 82.0 7.88e-01 100.0% 92.7%
3964273 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.86 80.0 7.58e-01 100.0% 92.2%
3503901 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.86 80.0 7.52e-01 100.0% 89.0%
3965064 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.85 81.0 7.37e-01 100.0% 90.4%
3955562 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.85 81.0 7.91e-01 100.0% 94.3%
4928262 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.85 81.0 7.74e-01 100.0% 95.5%
5062749 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.84 80.0 7.55e-01 100.0% 92.1%
3290347 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 74.0 7.52e-01 100.0% 93.9%
2507392 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.83 78.0 7.43e-01 100.0% 86.6%
4008775 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.83 78.0 6.85e-01 100.0% 94.3%
4034169 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.82 78.0 6.72e-01 100.0% 73.6%
5012680 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.81 76.0 7.34e-01 100.0% 94.5%
5027789 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.81 73.0 7.29e-01 100.0% 94.0%
5065801 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.80 75.0 7.41e-01 100.0% 94.3%
4969376 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.80 75.0 7.03e-01 100.0% 90.7%
3728463 4.1.1.179 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6590 0.79 73.0 5.95e-01 100.0% 91.4%
3589640 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.79 74.0 7.12e-01 100.0% 92.7%
3691426 4.1.1.179 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6590 0.79 73.0 5.94e-01 100.0% 91.4%
3694663 4.1.1.179 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6590 0.78 72.0 5.96e-01 100.0% 92.3%
3955877 4.1.1.432 ↗ beta barrels › SH3 › SH3 › SH3 › PF27466 0.78 69.0 6.91e-01 100.0% 94.0%
3636066 4.1.1.179 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6590 0.78 72.0 6.05e-01 100.0% 88.7%
1688342 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 70.0 6.00e-01 100.0% 81.9%
4938225 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.75 70.0 6.90e-01 100.0% 95.2%
4950603 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.74 70.0 6.60e-01 100.0% 87.8%
4961922 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 68.0 6.61e-01 100.0% 92.7%
4016602 4.1.1.179 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6590 0.74 68.0 6.00e-01 100.0% 90.9%
4320297 4.1.1.88 ↗ beta barrels › SH3 › SH3 › SH3 › ToxN_toxin 0.69 63.0 5.09e-01 100.0% 69.7%
154942 4.1.1.88 ↗ beta barrels › SH3 › SH3 › SH3 › ToxN_toxin 0.67 60.0 5.07e-01 100.0% 81.2%
3785385 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 36.0 3.79e-01 99.0% 74.4%