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IMGVR_UViG_3300029734_000143-3300029734-Ga0245168_1051949
Arc-VirIMGVR_UViG_3300029734_000143-3300029734-Ga0245168_1051949
Identity
- Kingdom:
- archaea
Quality
74.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-50
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4p02A02 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.72 | 54.0 | 3.44e-01 | 84.0% | 16.9% |
| 3ea5D00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.69 | 62.0 | 3.34e-01 | 98.0% | 10.1% |
| 3woyA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.69 | 62.0 | 3.95e-01 | 100.0% | 32.5% |
| 4l7mA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.68 | 60.0 | 3.72e-01 | 96.0% | 26.4% |
| 5cwhA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.68 | 54.0 | 3.80e-01 | 98.0% | 28.2% |
| 4y5jA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.67 | 53.0 | 3.40e-01 | 100.0% | 18.9% |
| 4d49A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.67 | 57.0 | 3.68e-01 | 98.0% | 34.9% |
| 1bk6A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.67 | 58.0 | 3.39e-01 | 98.0% | 20.4% |
| 3c5wA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.67 | 52.0 | 3.38e-01 | 98.0% | 18.9% |
| 4j8sA00 | 1.25.40.840 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › CCR4-NOT transcription complex subunit 1 TTP binding domain | 0.66 | 56.0 | 3.91e-01 | 100.0% | 70.0% |
| 1gw5B00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.65 | 59.0 | 3.30e-01 | 100.0% | 12.8% |
| 4adnA01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.64 | 49.0 | 4.15e-01 | 84.0% | 83.5% |
| 6whbA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.64 | 55.0 | 3.44e-01 | 98.0% | 20.6% |
| 1vw4L01 | 3.90.1030.10 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 | 0.64 | 52.0 | 3.85e-01 | 90.0% | 54.1% |
| 3zfiA00 | 1.10.890.40 | Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › | 0.63 | 55.0 | 4.50e-01 | 98.0% | 82.8% |
| 4u2xF00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.63 | 53.0 | 3.73e-01 | 98.0% | 54.3% |
| 4mk3A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.63 | 53.0 | 4.13e-01 | 96.0% | 69.6% |
| 1gw5A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.62 | 52.0 | 2.97e-01 | 98.0% | 13.7% |
| 2losA00 | 1.10.10.1740 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Transmembrane protein 14-like | 0.62 | 44.0 | 3.39e-01 | 76.0% | 78.6% |
| 5vjcA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.61 | 54.0 | 3.40e-01 | 100.0% | 56.5% |
| 3keaA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.61 | 51.0 | 3.24e-01 | 98.0% | 18.4% |
| 3tw8A03 | 6.10.140.1000 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 38.0 | 4.12e-01 | 84.0% | 78.0% |
| 4ptsB02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 50.0 | 3.51e-01 | 98.0% | 42.4% |
| 4tpoA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.59 | 52.0 | 3.09e-01 | 98.0% | 52.0% |
| 3ltjA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.59 | 51.0 | 3.45e-01 | 98.0% | 26.2% |
| 4nnzA01 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.57 | 49.0 | 3.24e-01 | 94.0% | 53.5% |
| 4k35A03 | 1.10.287.1170 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › glycoside hydrolase family 81 endo-[beta] glucanase | 0.57 | 45.0 | 4.14e-01 | 92.0% | 74.3% |
| 3wuhA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.56 | 47.0 | 3.34e-01 | 100.0% | 63.7% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3402632 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.73 | 60.0 | 3.96e-01 | 100.0% | 23.8% |
| 3417019 | 109.4.1.298 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › VPS15-like_hel | 0.72 | 52.0 | 3.48e-01 | 96.0% | 20.5% |
| 4017651 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.72 | 62.0 | 4.38e-01 | 100.0% | 32.5% |
| 3224448 | 4967.1.1.35 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › PF28867 | 0.71 | 58.0 | 3.65e-01 | 94.0% | 32.1% |
| 3679344 | 109.4.1.15 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › VHS | 0.69 | 59.0 | 4.35e-01 | 98.0% | 37.8% |
| 3339214 | 109.4.1.1497 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, CLASP_N, XMAP215_CLASP_TOG | 0.68 | 60.0 | 3.28e-01 | 98.0% | 11.9% |
| 3722847 | 109.4.1.80 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RRN3 | 0.68 | 62.0 | 3.73e-01 | 98.0% | 16.4% |
| 3559443 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.68 | 62.0 | 4.26e-01 | 100.0% | 32.5% |
| 3598473 | 109.4.1.1310 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TRIP12_N | 0.67 | 60.0 | 3.69e-01 | 100.0% | 26.8% |
| 4648923 | 109.4.1.337 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ipi1_N | 0.65 | 56.0 | 3.78e-01 | 98.0% | 43.1% |
| 3562276 | 389.1.1.119 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › BRINP | 0.65 | 57.0 | 4.53e-01 | 98.0% | 64.0% |
| 3187864 | 109.4.1.266 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › XMAP215_CLASP_TOG | 0.65 | 57.0 | 3.58e-01 | 100.0% | 30.9% |
| 3648403 | 109.4.1.553 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IBN_N,Xpo1 | 0.65 | 55.0 | 3.46e-01 | 98.0% | 40.0% |
| 1182581 | 109.4.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm | 0.65 | 55.0 | 3.73e-01 | 98.0% | 42.3% |
| 3599722 | 109.4.1.548 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120 | 0.65 | 58.0 | 3.11e-01 | 100.0% | 6.4% |
| 3455562 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 56.0 | 3.38e-01 | 98.0% | 27.8% |
| 3218071 | 3745.1.1.1 ↗ | alpha bundles › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Na_Ca_ex | 0.64 | 52.0 | 3.18e-01 | 98.0% | 66.5% |
| 3959510 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.62 | 50.0 | 2.91e-01 | 98.0% | 9.8% |
| 3833474 | 611.3.1.0 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.61 | 51.0 | 4.14e-01 | 96.0% | 60.0% |
| 4526998 | 4314.1.1.1 ↗ | alpha arrays › helical domain in Api92-like proteins › helical domain in Api92-like proteins › helical domain in Api92-like proteins › DUF1281 | 0.59 | 39.0 | 3.01e-01 | 70.0% | 97.7% |
| 3281498 | 604.24.1.1 ↗ | alpha bundles › Spectrin repeat-like › Helical bundle domain in putative transcriptional regulator Jann_0659-related proteins › Helical bundle domain in putative transcriptional regulator Jann_0659-related proteins › PaaX_C | 0.58 | 49.0 | 4.27e-01 | 98.0% | 65.0% |
| 3451722 | 3930.1.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase | 0.58 | 51.0 | 3.82e-01 | 100.0% | 52.0% |
| 3518709 | 109.4.1.14 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MyTH4 | 0.58 | 47.0 | 3.29e-01 | 100.0% | 31.5% |
D2
medium
residues 51-106