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IMGVR_UViG_3300029775_000005-3300029775-Ga0134843_100058411

Arc-Vir

IMGVR_UViG_3300029775_000005-3300029775-Ga0134843_100058411

Quality

85.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-105
PDB
Domain cluster: representative
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4esjA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 54.0 5.64e-01 80.8% 77.8%
3o2pE00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 51.0 5.38e-01 81.8% 79.1%
2vxzA02 1.10.10.1490 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.75 59.0 6.24e-01 83.8% 95.4%
1bbyA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 49.0 5.67e-01 85.9% 98.6%
3zcoA00 1.10.10.2450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.71 63.0 5.82e-01 97.0% 90.6%
1p6rA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 50.0 5.44e-01 90.9% 89.0%
2lsoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 53.0 5.68e-01 88.9% 94.0%
1fnnB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 60.0 6.00e-01 100.0% 91.3%
6qpqB00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.70 54.0 5.90e-01 89.9% 100.0%
4etsA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 46.0 4.91e-01 81.8% 77.0%
2l01A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 45.0 4.98e-01 82.8% 83.1%
1t98A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 55.0 5.79e-01 87.9% 95.4%
3cuqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 51.0 5.56e-01 80.8% 93.8%
3cuqA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 45.0 4.88e-01 82.8% 80.0%
7jgsG02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 59.0 6.00e-01 93.9% 93.9%
1wj5A01 1.10.10.980 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › CST, Suppressor of Cdc13 homolog, complex subunit STN1, N-terminal domain 0.69 53.0 5.35e-01 81.8% 94.9%
3bz6A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 48.0 5.30e-01 85.9% 92.3%
3e1sA01 1.10.10.2220 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.67 49.0 4.99e-01 79.8% 78.9%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 49.0 5.15e-01 92.9% 87.6%
3cjnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 49.0 4.32e-01 96.0% 52.7%
1vtnC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 55.0 5.44e-01 94.9% 87.3%
3t5xA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 46.0 5.24e-01 78.8% 100.0%
2xcqA02 3.90.199.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase II; domain 5 › Topoisomerase II, domain 5 0.66 59.0 4.26e-01 98.0% 76.4%
1cf7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 49.0 5.30e-01 82.8% 95.1%
3dplC03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 44.0 4.72e-01 77.8% 83.1%
6az1a00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 41.0 4.62e-01 82.8% 90.3%
1fshA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 49.0 4.99e-01 82.8% 94.7%
7l1iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 48.0 4.21e-01 97.0% 53.6%
3x1oA00 1.20.120.1790 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.63 54.0 4.81e-01 98.0% 77.2%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 49.0 4.58e-01 100.0% 68.3%
1nklA00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.60 40.0 4.45e-01 91.9% 87.2%
3u21A00 1.10.10.2430 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NFRKB winged helix-like domain 0.60 51.0 4.99e-01 93.9% 91.7%
3buxB02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.60 42.0 4.43e-01 91.9% 82.0%
2kloA00 1.10.10.1420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA replication factor Cdt1, C-terminal WH domain 0.59 48.0 4.33e-01 93.9% 63.8%
1urjA03 1.10.150.560 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.57 38.0 4.16e-01 98.0% 84.1%
2k7bA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.56 35.0 3.86e-01 79.8% 80.3%
2be4A02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 44.0 4.39e-01 92.9% 85.1%
1eg3A03 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 45.0 4.69e-01 93.9% 100.0%
3s63A00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.54 42.0 4.41e-01 92.9% 94.3%
2efeA01 1.10.246.120 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.52 35.0 3.80e-01 70.7% 98.8%
1e9rA02 1.10.8.80 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Magnesium chelatase subunit I, C-Terminal domain 0.52 38.0 3.75e-01 81.8% 70.8%
ECOD (80)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3994510 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 59.0 5.26e-01 86.9% 56.4%
3264275 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 64.0 6.31e-01 90.9% 95.2%
3267557 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 61.0 6.40e-01 87.9% 100.0%
4972260 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 60.0 6.09e-01 92.9% 91.6%
4543264 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 61.0 5.10e-01 89.9% 55.2%
3645078 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.73 60.0 5.83e-01 88.9% 81.8%
3581108 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 67.0 6.24e-01 100.0% 85.0%
5042403 101.1.2.913 alpha arrays › HTH › HTH › winged helix domain › WH_Lhr 0.72 55.0 5.02e-01 98.0% 60.0%
3597746 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.72 48.0 5.23e-01 80.8% 83.7%
3501318 101.1.2.394 alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.72 65.0 4.33e-01 100.0% 61.5%
3554755 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 52.0 5.83e-01 80.8% 100.0%
4182618 101.1.2.616 alpha arrays › HTH › HTH › winged helix domain › PF27833 0.72 64.0 6.27e-01 98.0% 90.5%
3897149 101.1.2.500 alpha arrays › HTH › HTH › winged helix domain › PF30898 0.72 61.0 5.97e-01 91.9% 89.5%
5015083 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 53.0 5.73e-01 86.9% 96.2%
3648804 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 62.0 5.97e-01 97.0% 90.4%
3214912 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 58.0 5.84e-01 94.9% 87.0%
4997786 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 53.0 5.63e-01 98.0% 92.9%
3227729 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.71 62.0 6.15e-01 97.0% 91.4%
4947850 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 63.0 6.25e-01 98.0% 99.0%
3236724 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 52.0 5.09e-01 82.8% 72.4%
None 0.70 59.0 5.90e-01 92.9% 90.0%
5063930 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 55.0 5.75e-01 91.9% 92.2%
5046136 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 63.0 5.63e-01 100.0% 72.9%
3519165 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 53.0 5.65e-01 79.8% 92.9%
3787825 101.1.2.539 alpha arrays › HTH › HTH › winged helix domain › WH_GDS1 0.69 55.0 5.00e-01 85.9% 67.7%
3781893 101.1.2.147 alpha arrays › HTH › HTH › winged helix domain › ORC4_C 0.69 60.0 5.24e-01 97.0% 90.6%
3952422 101.1.2.642 alpha arrays › HTH › HTH › winged helix domain › DUF3631 0.69 55.0 5.78e-01 86.9% 97.8%
5011183 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.68 61.0 5.97e-01 100.0% 92.7%
5051570 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 58.0 5.57e-01 93.9% 91.3%
4167796 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.68 58.0 4.52e-01 92.9% 43.3%
4988334 101.1.2.913 alpha arrays › HTH › HTH › winged helix domain › WH_Lhr 0.68 50.0 5.26e-01 87.9% 85.6%
4982868 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 52.0 5.50e-01 92.9% 94.1%
4990676 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.68 61.0 5.94e-01 100.0% 93.6%
4609020 101.1.2.642 alpha arrays › HTH › HTH › winged helix domain › DUF3631 0.68 56.0 5.81e-01 88.9% 100.0%
5034107 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 52.0 5.54e-01 90.9% 95.3%
4979532 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 49.0 5.37e-01 90.9% 95.0%
3551106 101.1.2.165 alpha arrays › HTH › HTH › winged helix domain › ORC_WH_C 0.68 54.0 5.17e-01 84.8% 93.9%
3163573 101.1.2.52 alpha arrays › HTH › HTH › winged helix domain › KicB 0.68 58.0 5.52e-01 92.9% 80.0%
3532208 7558.1.1.10 a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › GPAT_C 0.68 58.0 4.72e-01 93.9% 50.3%
3224751 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 52.0 5.29e-01 82.8% 96.8%
1519214 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.67 56.0 5.62e-01 93.9% 89.2%
3705220 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.67 47.0 5.00e-01 81.8% 84.7%
4252854 198.1.1.0 alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.67 48.0 5.37e-01 88.9% 98.7%
5003874 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.67 60.0 5.65e-01 100.0% 85.0%
3598997 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.67 47.0 5.04e-01 81.8% 85.9%
4381449 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 46.0 5.23e-01 86.9% 100.0%
4109840 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.67 56.0 5.68e-01 92.9% 92.0%
3483446 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 54.0 5.49e-01 100.0% 91.6%
4013574 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 59.0 5.66e-01 100.0% 88.7%
3394692 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 59.0 5.81e-01 99.0% 98.1%
3806096 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.66 56.0 5.16e-01 92.9% 72.3%
5032239 101.1.2.933 alpha arrays › HTH › HTH › winged helix domain › DUF7669 0.66 49.0 5.23e-01 81.8% 90.6%
4937898 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.66 56.0 3.84e-01 91.9% 30.4%
4107264 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 55.0 5.21e-01 89.9% 88.7%
5007356 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.66 55.0 3.75e-01 89.9% 30.4%
5050129 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.65 58.0 5.64e-01 100.0% 93.6%
5006986 101.1.2.913 alpha arrays › HTH › HTH › winged helix domain › WH_Lhr 0.65 51.0 5.07e-01 93.9% 81.0%
3541292 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 58.0 5.72e-01 100.0% 94.3%
4589278 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.65 54.0 5.31e-01 100.0% 85.7%
4936865 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 55.0 5.13e-01 94.9% 85.6%
3881443 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.65 55.0 3.96e-01 93.9% 50.7%
4976066 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 48.0 5.22e-01 79.8% 100.0%
4948481 247.1.1.1 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.64 48.0 3.51e-01 78.8% 45.2%
4931729 101.1.2.953 alpha arrays › HTH › HTH › winged helix domain › PF29890 0.64 57.0 5.28e-01 100.0% 86.4%
3960336 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 53.0 5.40e-01 91.9% 94.7%
5001357 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 53.0 5.30e-01 91.9% 92.0%
4030732 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 46.0 4.94e-01 83.8% 92.9%
5070358 101.1.2.913 alpha arrays › HTH › HTH › winged helix domain › WH_Lhr 0.62 54.0 4.83e-01 98.0% 93.1%
5077819 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 54.0 4.57e-01 94.9% 99.4%
4979916 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 51.0 4.75e-01 100.0% 71.5%
4937974 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 54.0 4.64e-01 98.0% 96.8%
4252455 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 51.0 5.20e-01 92.9% 95.8%
4009834 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 41.0 4.45e-01 79.8% 92.5%
3790196 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.57 48.0 3.91e-01 97.0% 56.0%
3237732 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.56 47.0 4.49e-01 100.0% 78.3%
4028610 101.1.2.123 alpha arrays › HTH › HTH › winged helix domain › Paf67 0.56 42.0 4.20e-01 80.8% 87.6%
3601018 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.55 42.0 4.35e-01 86.9% 88.9%
4020224 101.1.2.359 alpha arrays › HTH › HTH › winged helix domain › GPIID_WHD 0.55 46.0 4.64e-01 93.9% 93.0%
3214449 198.1.1.0 alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.55 40.0 4.31e-01 93.9% 95.0%
3702209 108.1.1.29 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.54 42.0 4.41e-01 90.9% 94.4%