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IMGVR_UViG_3300029775_000005-3300029775-Ga0134843_100058419
Arc-VirIMGVR_UViG_3300029775_000005-3300029775-Ga0134843_100058419
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-68
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gniA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.72 | 51.0 | 4.66e-01 | 76.2% | 55.8% |
| 2wdqC00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.70 | 59.0 | 4.74e-01 | 92.1% | 70.2% |
| 1a3qA01 | 2.60.40.340 | Mainly Beta › Sandwich › Immunoglobulin-like › Rel homology domain (RHD), DNA-binding domain | 0.68 | 60.0 | 4.26e-01 | 96.8% | 92.2% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 54.0 | 5.52e-01 | 100.0% | 90.3% |
| 3besR03 | 6.10.140.1480 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 46.0 | 4.86e-01 | 82.5% | 83.9% |
| 2wmmA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.65 | 48.0 | 5.44e-01 | 95.2% | 100.0% |
| 7sl9A01 | 1.20.1730.10 | Mainly Alpha › Up-down Bundle › Sodium/glucose cotransporter › Sodium/glucose cotransporter | 0.65 | 54.0 | 3.25e-01 | 96.8% | 81.4% |
| 1is8A01 | 1.10.286.10 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › GTP cyclohydrolase I, N-terminal domain | 0.64 | 52.0 | 5.36e-01 | 92.1% | 98.3% |
| 2aplA02 | 1.10.8.340 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PG0816-like | 0.64 | 44.0 | 4.10e-01 | 79.4% | 56.8% |
| 7wboA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.63 | 54.0 | 3.96e-01 | 98.4% | 42.8% |
| 7s0rB01 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.63 | 50.0 | 4.70e-01 | 90.5% | 71.1% |
| 4m52A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.63 | 52.0 | 3.58e-01 | 92.1% | 38.7% |
| 2e6oA00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.63 | 49.0 | 4.49e-01 | 87.3% | 78.2% |
| 1gt0D00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.62 | 52.0 | 4.84e-01 | 95.2% | 88.6% |
| 2v0xA01 | 1.10.287.3160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 56.0 | 4.01e-01 | 100.0% | 65.5% |
| 3swhA01 | 1.10.357.50 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.61 | 53.0 | 3.97e-01 | 100.0% | 44.8% |
| 2hqmA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 50.0 | 3.47e-01 | 93.7% | 41.2% |
| 1i6zA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.61 | 50.0 | 3.91e-01 | 96.8% | 42.2% |
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 52.0 | 3.69e-01 | 100.0% | 32.3% |
| 3fxdB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 49.0 | 5.10e-01 | 98.4% | 96.6% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.59 | 52.0 | 4.86e-01 | 96.8% | 84.4% |
| 2icwG02 | 1.10.10.530 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › mam-mhc complex, Chain D, Domain 2 | 0.58 | 43.0 | 3.89e-01 | 90.5% | 56.2% |
| 1e2aA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.58 | 46.0 | 3.95e-01 | 100.0% | 53.9% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.57 | 51.0 | 4.71e-01 | 98.4% | 83.5% |
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 52.0 | 5.00e-01 | 100.0% | 97.2% |
| 1b3qA01 | 1.10.287.560 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Histidine kinase CheA-like, homodimeric domain | 0.57 | 46.0 | 4.70e-01 | 96.8% | 90.3% |
| 2yevA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 46.0 | 4.37e-01 | 95.2% | 75.7% |
| 4nb5B02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.57 | 50.0 | 5.05e-01 | 98.4% | 96.9% |
| 2js5A00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.56 | 50.0 | 4.84e-01 | 100.0% | 91.5% |
| 6t0bc01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 48.0 | 4.45e-01 | 93.7% | 78.2% |
| 1qv9A02 | 6.10.140.120 | Special › Helix non-globular › Helix Hairpins › | 0.56 | 48.0 | 4.17e-01 | 100.0% | 72.8% |
| 5fb0A02 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.55 | 45.0 | 3.71e-01 | 88.9% | 82.1% |
| 1qd1B02 | 3.30.70.670 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Formiminotransferase, C-terminal subdomain | 0.53 | 41.0 | 3.12e-01 | 87.3% | 36.6% |
| 1dp7P00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 41.0 | 3.94e-01 | 92.1% | 80.3% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4988108 | 1049.2.1.0 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain | 0.99 | 91.0 | 7.39e-01 | 95.2% | 57.1% |
| 3943565 | 1049.2.1.0 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain | 0.95 | 90.0 | 7.22e-01 | 100.0% | 57.3% |
| 3948958 | 1049.2.1.0 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain | 0.93 | 82.0 | 6.74e-01 | 93.7% | 56.2% |
| 3973303 | 1049.2.1.3 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain › PF26776 | 0.87 | 79.0 | 6.27e-01 | 98.4% | 53.0% |
| 5002735 | 1049.2.1.0 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain | 0.86 | 74.0 | 6.34e-01 | 92.1% | 63.2% |
| 4136884 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.69 | 62.0 | 4.20e-01 | 100.0% | 86.4% |
| 3413935 | 108.1.1.97 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 | 0.66 | 57.0 | 5.10e-01 | 96.8% | 85.6% |
| 4951651 | 5042.1.1.1 ↗ | extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › CorA | 0.65 | 55.0 | 5.42e-01 | 93.7% | 97.1% |
| 3486556 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.63 | 54.0 | 4.93e-01 | 96.8% | 88.2% |
| 3195747 | 3788.1.1.0 ↗ | alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) | 0.62 | 48.0 | 4.65e-01 | 92.1% | 74.3% |
| 3270040 | 101.1.16.0 ↗ | alpha arrays › HTH › HTH › Ribosomal protein L11, C-terminal domain | 0.62 | 50.0 | 4.67e-01 | 92.1% | 86.3% |
| 3502362 | 601.54.1.3 ↗ | alpha bundles › Four-helical up-and-down bundle › low CO2-inducible protein LCI1 › low CO2-inducible protein LCI1 › MTABC_N | 0.62 | 51.0 | 3.67e-01 | 100.0% | 31.4% |
| 4982611 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 54.0 | 4.15e-01 | 100.0% | 46.8% |
| 5023842 | 601.19.1.62 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › SpoIIM | 0.60 | 51.0 | 3.70e-01 | 96.8% | 43.2% |
| 4982959 | 3922.1.1.357 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Auto_anti-p27 | 0.59 | 51.0 | 4.31e-01 | 98.4% | 59.0% |
| 3744805 | 375.10.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DNA_Pol | 0.59 | 41.0 | 3.75e-01 | 90.5% | 55.3% |
| 3503768 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.58 | 50.0 | 3.80e-01 | 100.0% | 40.0% |
| 3725376 | 192.1.1.15 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › DUF6604 | 0.57 | 49.0 | 4.51e-01 | 98.4% | 73.8% |
| 3390444 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.56 | 47.0 | 3.33e-01 | 96.8% | 55.5% |
| 3412831 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.56 | 48.0 | 3.68e-01 | 96.8% | 41.3% |
| 2324007 | 192.30.1.1 ↗ | alpha bundles › Long alpha-hairpin › SepCysE N-terminal domain › SepCysE N-terminal domain › DUF2100 | 0.56 | 48.0 | 4.71e-01 | 96.8% | 92.9% |
| 3702706 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.55 | 48.0 | 4.46e-01 | 100.0% | 77.5% |
| 5074223 | 622.5.1.0 ↗ | alpha bundles › YvfG-like › Probable 26S proteasome regulatory subunit p27 › Probable 26S proteasome regulatory subunit p27 | 0.54 | 49.0 | 4.33e-01 | 100.0% | 90.0% |
| 3280959 | 3636.1.1.0 ↗ | a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain | 0.54 | 48.0 | 3.66e-01 | 100.0% | 54.5% |
| 3913339 | 7022.1.1.1 ↗ | alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › MBOAT | 0.53 | 46.0 | 3.21e-01 | 100.0% | 74.9% |
D2
high
residues 97-179
Domain cluster:
rep: NC_049498.1__YP_009887297.1__HYQ28_gp31__00031__D90-184
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04865.20 best | Baseplate_J | 62.4 | 6.60e-17 | 97.6% | 83.8% |
D3
high
residues 210-266
Domain cluster:
rep: IMGVR_UViG_3300033156_001187-3300033156-Ga0366836_100643128__D1-81
CATH (81)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ml8A02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.84 | 75.0 | 6.28e-01 | 100.0% | 85.6% |
| 1sq1A00 | 3.60.150.10 | Alpha Beta › 4-Layer Sandwich › Chorismate synthase, AroC fold › Chorismate synthase AroC | 0.83 | 68.0 | 4.21e-01 | 87.7% | 33.8% |
| 3gkuC02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.80 | 70.0 | 6.09e-01 | 100.0% | 85.4% |
| 3w5xA00 | 3.30.70.1350 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cation efflux protein, cytoplasmic domain | 0.79 | 70.0 | 6.28e-01 | 100.0% | 87.5% |
| 1nnnA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.79 | 71.0 | 5.50e-01 | 100.0% | 57.0% |
| 1yj7D02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.78 | 69.0 | 6.00e-01 | 100.0% | 74.7% |
| 6o6eB02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.78 | 70.0 | 5.64e-01 | 100.0% | 58.9% |
| 7xbsA01 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.78 | 70.0 | 6.60e-01 | 100.0% | 83.6% |
| 2v7bA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.77 | 70.0 | 5.79e-01 | 100.0% | 70.1% |
| 6vhvA01 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.77 | 69.0 | 5.83e-01 | 100.0% | 65.6% |
| 3e7wA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.76 | 69.0 | 5.47e-01 | 100.0% | 63.1% |
| 3iplA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.76 | 68.0 | 5.97e-01 | 100.0% | 77.1% |
| 4dg8A02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.75 | 67.0 | 5.70e-01 | 100.0% | 64.1% |
| 3bypA00 | 3.30.70.1350 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cation efflux protein, cytoplasmic domain | 0.74 | 64.0 | 5.71e-01 | 100.0% | 82.9% |
| 1josA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.73 | 63.0 | 5.30e-01 | 100.0% | 83.0% |
| 4r0mA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.73 | 63.0 | 5.18e-01 | 100.0% | 65.7% |
| 4wd1A02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.72 | 63.0 | 4.90e-01 | 100.0% | 50.0% |
| 4bpeC01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.72 | 60.0 | 5.28e-01 | 100.0% | 77.2% |
| 2kdnA00 | 3.30.300.90 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like | 0.72 | 61.0 | 5.07e-01 | 100.0% | 63.0% |
| 1ib8A01 | 3.30.300.70 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › RimP-like superfamily, N-terminal | 0.72 | 62.0 | 5.52e-01 | 100.0% | 90.4% |
| 2kzfA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.71 | 60.0 | 5.03e-01 | 100.0% | 77.4% |
| 2e7gA01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.71 | 61.0 | 5.05e-01 | 100.0% | 78.3% |
| 5xyiD01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.71 | 59.0 | 5.26e-01 | 100.0% | 79.8% |
| 6hfxA01 | 3.30.70.3040 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.71 | 58.0 | 4.89e-01 | 96.5% | 91.3% |
| 1uwvA03 | 2.40.50.1070 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.70 | 61.0 | 4.67e-01 | 100.0% | 42.3% |
| 2cxcA02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.69 | 57.0 | 5.46e-01 | 98.2% | 98.6% |
| 4u9rA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 53.0 | 4.80e-01 | 87.7% | 70.7% |
| 2cxcA01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.68 | 57.0 | 5.45e-01 | 100.0% | 89.9% |
| 2dyjA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.67 | 57.0 | 4.98e-01 | 100.0% | 87.9% |
| 1q8bA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 56.0 | 4.87e-01 | 100.0% | 69.9% |
| 3tufA00 | 1.10.287.4300 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Stage III sporulation protein AH-like | 0.66 | 54.0 | 4.45e-01 | 100.0% | 48.7% |
| 4alzA01 | 3.30.1340.30 | Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › | 0.66 | 54.0 | 5.31e-01 | 100.0% | 90.3% |
| 2jjqA03 | 2.40.50.1070 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.65 | 57.0 | 4.29e-01 | 100.0% | 46.5% |
| 4qjvB00 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.65 | 48.0 | 4.20e-01 | 82.5% | 60.6% |
| 2d27A02 | 3.30.300.160 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › Type II secretion system, protein E, N-terminal domain | 0.65 | 50.0 | 4.52e-01 | 100.0% | 60.0% |
| 1u9dA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.65 | 55.0 | 4.44e-01 | 100.0% | 62.3% |
| 5xogK00 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.64 | 48.0 | 3.95e-01 | 82.5% | 49.6% |
| 3fgvA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 54.0 | 4.66e-01 | 100.0% | 75.3% |
| 2bh1X00 | 3.30.300.160 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › Type II secretion system, protein E, N-terminal domain | 0.62 | 47.0 | 4.57e-01 | 100.0% | 73.5% |
| 4dpoB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 53.0 | 4.50e-01 | 100.0% | 68.3% |
| 6fgjA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.62 | 50.0 | 3.90e-01 | 100.0% | 86.0% |
| 1qh5A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.62 | 48.0 | 3.18e-01 | 100.0% | 19.2% |
| 2j8aA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.62 | 53.0 | 4.68e-01 | 100.0% | 78.2% |
| 2p18A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.62 | 51.0 | 3.33e-01 | 98.2% | 30.7% |
| 7c2fB01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.62 | 51.0 | 4.62e-01 | 100.0% | 83.7% |
| 1x7vA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 51.0 | 4.44e-01 | 100.0% | 68.4% |
| 1y0hB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 51.0 | 4.40e-01 | 100.0% | 69.4% |
| 2rrlA01 | 3.30.750.140 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.61 | 51.0 | 4.20e-01 | 100.0% | 67.8% |
| 6eudA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 40.0 | 2.96e-01 | 70.2% | 80.0% |
| 3egoA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 50.0 | 3.67e-01 | 98.2% | 97.1% |
| 3kg0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 51.0 | 4.38e-01 | 100.0% | 69.1% |
| 3c26A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.60 | 51.0 | 3.38e-01 | 100.0% | 32.3% |
| 1f0lA01 | 3.90.175.10 | Alpha Beta › Alpha-Beta Complex › Diphtheria Toxin; domain 1 › Diphtheria Toxin, domain 1 | 0.60 | 48.0 | 3.37e-01 | 89.5% | 73.3% |
| 3l7vA00 | 3.90.870.10 | Alpha Beta › Alpha-Beta Complex › DHBP synthase › DHBP synthase | 0.60 | 50.0 | 3.38e-01 | 100.0% | 68.0% |
| 1hfeL03 | 3.40.950.10 | Alpha Beta › 3-Layer(aba) Sandwich › Fe-only Hydrogenase (Larger Subunit); Chain L, domain 3 › Fe-only Hydrogenase (Larger Subunit); Chain L, domain 3 | 0.59 | 42.0 | 3.20e-01 | 75.4% | 30.8% |
| 2dewX03 | 3.75.10.10 | Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A | 0.59 | 49.0 | 3.07e-01 | 100.0% | 41.4% |
| 1g62A00 | 3.75.10.10 | Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A | 0.59 | 49.0 | 3.39e-01 | 100.0% | 35.3% |
| 1wpqA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 50.0 | 3.55e-01 | 100.0% | 93.2% |
| 1txgA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 49.0 | 3.55e-01 | 100.0% | 93.9% |
| 3owrA00 | 2.60.40.4120 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 49.0 | 3.91e-01 | 100.0% | 92.9% |
| 3mogA03 | 3.30.750.190 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.58 | 48.0 | 4.22e-01 | 100.0% | 74.5% |
| 2rilA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 46.0 | 4.13e-01 | 100.0% | 67.4% |
| 3lklA00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.57 | 41.0 | 3.57e-01 | 77.2% | 84.9% |
| 5bseA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 47.0 | 3.47e-01 | 100.0% | 85.0% |
| 1uswA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 46.0 | 3.11e-01 | 100.0% | 35.8% |
| 4qtpD00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.56 | 40.0 | 3.33e-01 | 78.9% | 42.6% |
| 3k96A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 48.0 | 3.44e-01 | 100.0% | 87.7% |
| 2rcyA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 46.0 | 3.56e-01 | 100.0% | 90.9% |
| 6zwwC01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 41.0 | 2.98e-01 | 80.7% | 54.9% |
| 1auzA00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.55 | 38.0 | 3.14e-01 | 75.4% | 42.2% |
| 4i9fA03 | 3.30.300.290 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.54 | 42.0 | 3.92e-01 | 91.2% | 75.3% |
| 2go8A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 43.0 | 4.05e-01 | 100.0% | 73.0% |
| 2xauA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 42.0 | 3.01e-01 | 87.7% | 49.2% |
| 4hylA00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.53 | 37.0 | 3.14e-01 | 78.9% | 42.5% |
| 1ewqA02 | 3.30.420.110 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain | 0.53 | 42.0 | 3.55e-01 | 100.0% | 93.2% |
| 3tscA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 42.0 | 2.86e-01 | 100.0% | 47.6% |
| 4l8kD02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.52 | 41.0 | 2.92e-01 | 100.0% | 25.0% |
| 1tiyA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.52 | 39.0 | 2.96e-01 | 100.0% | 31.4% |
| 1iftA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.51 | 41.0 | 3.11e-01 | 100.0% | 34.5% |
| 3k12D00 | 3.30.1330.40 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like | 0.51 | 42.0 | 3.35e-01 | 93.0% | 57.5% |
| 2hhiA01 | 3.30.565.40 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like | 0.50 | 39.0 | 3.21e-01 | 91.2% | 60.2% |
ECOD (89)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4957577 | 327.20.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Baseplate structural protein gp6 C-terminal domain I › Baseplate structural protein gp6 C-terminal domain I | 0.95 | 90.0 | 8.58e-01 | 100.0% | 92.3% |
| 3943566 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.95 | 88.0 | 7.50e-01 | 98.2% | 97.6% |
| 3956580 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.82 | 75.0 | 5.94e-01 | 100.0% | 57.3% |
| 4947673 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.81 | 73.0 | 5.91e-01 | 100.0% | 71.4% |
| 3961647 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.81 | 72.0 | 6.58e-01 | 100.0% | 92.0% |
| 3960804 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.81 | 74.0 | 5.47e-01 | 100.0% | 48.1% |
| 3285417 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.80 | 71.0 | 6.22e-01 | 100.0% | 83.5% |
| 3626665 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.80 | 70.0 | 5.88e-01 | 100.0% | 57.9% |
| 3502850 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.79 | 70.0 | 5.30e-01 | 100.0% | 65.2% |
| 3894928 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.78 | 70.0 | 5.18e-01 | 100.0% | 62.9% |
| 4291635 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.78 | 70.0 | 5.69e-01 | 100.0% | 62.9% |
| 3741084 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.77 | 68.0 | 5.04e-01 | 100.0% | 63.8% |
| 3560120 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.77 | 68.0 | 5.12e-01 | 100.0% | 62.1% |
| 4028565 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.77 | 68.0 | 5.11e-01 | 100.0% | 62.9% |
| 4977836 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.77 | 70.0 | 4.16e-01 | 100.0% | 16.8% |
| 3960207 | 327.5.1.5 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C_3 | 0.77 | 69.0 | 5.07e-01 | 100.0% | 50.3% |
| 3371091 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.77 | 68.0 | 5.11e-01 | 100.0% | 63.6% |
| 3176730 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.77 | 68.0 | 5.07e-01 | 100.0% | 63.2% |
| 3519189 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.77 | 69.0 | 5.06e-01 | 100.0% | 66.9% |
| 3232715 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.77 | 69.0 | 5.03e-01 | 100.0% | 60.0% |
| 4024608 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.77 | 68.0 | 4.92e-01 | 100.0% | 62.5% |
| 3618863 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.77 | 68.0 | 5.22e-01 | 100.0% | 58.5% |
| 2636487 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.77 | 69.0 | 5.71e-01 | 100.0% | 61.6% |
| 3478870 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.77 | 68.0 | 4.90e-01 | 100.0% | 69.4% |
| 3498427 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.77 | 66.0 | 3.95e-01 | 96.5% | 22.1% |
| 3259929 | 327.5.1.5 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C_3 | 0.77 | 68.0 | 5.12e-01 | 100.0% | 64.4% |
| 3502492 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.76 | 67.0 | 3.80e-01 | 100.0% | 13.6% |
| 4517224 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.76 | 69.0 | 5.65e-01 | 100.0% | 59.0% |
| 4417244 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.76 | 69.0 | 5.66e-01 | 100.0% | 58.0% |
| 3339142 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.76 | 67.0 | 5.02e-01 | 100.0% | 62.1% |
| 4442243 | 327.1.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Alpha-lytic protease prodomain › Alpha-lytic protease prodomain › Pro_Al_protease | 0.76 | 63.0 | 5.94e-01 | 100.0% | 75.7% |
| 3322570 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.76 | 66.0 | 4.92e-01 | 100.0% | 59.5% |
| 3669526 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.75 | 66.0 | 4.86e-01 | 100.0% | 58.0% |
| 4324633 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.75 | 65.0 | 5.17e-01 | 100.0% | 69.2% |
| 3248212 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.75 | 66.0 | 4.92e-01 | 100.0% | 57.2% |
| 4011063 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.75 | 65.0 | 4.98e-01 | 100.0% | 64.4% |
| 2636517 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.75 | 67.0 | 6.08e-01 | 100.0% | 78.9% |
| 4353500 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.75 | 68.0 | 5.49e-01 | 100.0% | 56.2% |
| 3924647 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.75 | 66.0 | 5.01e-01 | 100.0% | 64.4% |
| 2088406 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.75 | 66.0 | 5.11e-01 | 100.0% | 59.2% |
| 3081063 | 327.13.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › YscJ_FliF | 0.74 | 64.0 | 5.51e-01 | 100.0% | 72.0% |
| 3739731 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.74 | 66.0 | 5.44e-01 | 100.0% | 60.0% |
| 4088599 | 327.10.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › RBFA | 0.74 | 64.0 | 5.19e-01 | 100.0% | 72.7% |
| 3178317 | 327.5.1.6 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-dom_DIP2-like | 0.74 | 66.0 | 4.99e-01 | 100.0% | 49.2% |
| 5078726 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.73 | 65.0 | 5.37e-01 | 100.0% | 64.0% |
| 4490974 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.73 | 63.0 | 4.25e-01 | 100.0% | 85.3% |
| 4461393 | 327.12.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › UbiD C-terminal domain-like › UbiD C-terminal domain-like › UbiD_C | 0.72 | 64.0 | 5.07e-01 | 100.0% | 52.2% |
| 5044612 | 3261.1.1.1 ↗ | a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON | 0.72 | 62.0 | 5.75e-01 | 100.0% | 78.7% |
| 4612674 | 2003.1.5.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr | 0.72 | 61.0 | 3.72e-01 | 100.0% | 19.6% |
| 5057096 | 3261.1.1.1 ↗ | a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON | 0.71 | 61.0 | 5.92e-01 | 100.0% | 90.8% |
| 4167187 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.71 | 59.0 | 6.06e-01 | 98.2% | 100.0% |
| 3289468 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.70 | 61.0 | 5.76e-01 | 98.2% | 95.7% |
| 3963230 | 3261.1.1.1 ↗ | a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON | 0.70 | 58.0 | 5.35e-01 | 100.0% | 81.2% |
| 4991181 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.69 | 60.0 | 5.83e-01 | 100.0% | 89.2% |
| 5043702 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.69 | 60.0 | 4.90e-01 | 100.0% | 60.0% |
| 1565126 | 3261.1.1.7 ↗ | a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › CdsD_PD1 | 0.69 | 58.0 | 5.60e-01 | 100.0% | 86.2% |
| 3960824 | 327.11.1.7 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_NusA_2nd | 0.69 | 60.0 | 5.68e-01 | 100.0% | 88.6% |
| 3285846 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.68 | 56.0 | 5.18e-01 | 100.0% | 72.0% |
| 5066304 | 3261.1.1.0 ↗ | a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb | 0.66 | 55.0 | 5.29e-01 | 100.0% | 84.3% |
| 3242316 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.66 | 54.0 | 5.09e-01 | 100.0% | 82.7% |
| 4951626 | 327.13.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system | 0.66 | 57.0 | 5.08e-01 | 100.0% | 89.4% |
| 5044613 | 3261.1.1.1 ↗ | a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON | 0.66 | 54.0 | 5.21e-01 | 100.0% | 84.3% |
| 4660622 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.66 | 57.0 | 3.77e-01 | 100.0% | 78.0% |
| 3997033 | 224.1.1.0 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like | 0.65 | 49.0 | 4.36e-01 | 100.0% | 56.5% |
| 4411671 | 3261.1.1.2 ↗ | a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › Yop-YscD_ppl_1st | 0.64 | 52.0 | 5.06e-01 | 100.0% | 86.2% |
| 5027442 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.63 | 50.0 | 5.00e-01 | 100.0% | 91.7% |
| 5903 | 327.8.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › GSPII protein E N-terminal domain-like › GSPII protein E N-terminal domain-like › GSPE_N1E | 0.62 | 47.0 | 4.57e-01 | 100.0% | 73.5% |
| 3958080 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.60 | 52.0 | 4.80e-01 | 100.0% | 89.3% |
| 169071 | 2003.1.1.30 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ApbA | 0.60 | 50.0 | 3.68e-01 | 98.2% | 98.2% |
| 3582604 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.59 | 39.0 | 2.64e-01 | 70.2% | 88.4% |
| 3970825 | 2496.1.1.0 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like | 0.58 | 42.0 | 3.52e-01 | 80.7% | 44.5% |
| 3884503 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.58 | 39.0 | 2.65e-01 | 71.9% | 61.6% |
| 4954400 | 2003.1.1.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_Gly3P_dh_N | 0.58 | 49.0 | 3.56e-01 | 100.0% | 93.1% |
| 3832028 | 2004.1.1.364 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C | 0.57 | 42.0 | 2.47e-01 | 78.9% | 35.2% |
| 4053114 | 2003.1.1.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_Gly3P_dh_N | 0.57 | 48.0 | 3.49e-01 | 100.0% | 91.7% |
| 4330757 | 2003.1.1.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_Gly3P_dh_N | 0.57 | 47.0 | 3.48e-01 | 100.0% | 94.3% |
| 4348582 | 2003.1.1.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_Gly3P_dh_N | 0.57 | 47.0 | 3.49e-01 | 100.0% | 94.3% |
| 4036390 | 2003.1.1.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_Gly3P_dh_N | 0.56 | 46.0 | 3.44e-01 | 100.0% | 91.4% |
| 3925247 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.55 | 41.0 | 2.99e-01 | 80.7% | 46.3% |
| 4063963 | 2003.1.1.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_Gly3P_dh_N | 0.55 | 45.0 | 3.32e-01 | 100.0% | 91.4% |
| 3824313 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.55 | 39.0 | 2.85e-01 | 80.7% | 50.3% |
| 3628523 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.54 | 39.0 | 2.81e-01 | 80.7% | 42.0% |
| 3601297 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 40.0 | 2.81e-01 | 80.7% | 54.3% |
| 1806489 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.53 | 43.0 | 3.71e-01 | 100.0% | 77.6% |
| 3242009 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.52 | 42.0 | 2.88e-01 | 91.2% | 57.9% |
| 4422146 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.52 | 42.0 | 3.00e-01 | 98.2% | 54.6% |
| 3719603 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.51 | 43.0 | 3.00e-01 | 100.0% | 58.7% |
| 3309616 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.51 | 39.0 | 2.67e-01 | 86.0% | 67.5% |
| 3943219 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.51 | 40.0 | 3.00e-01 | 93.0% | 48.2% |
D4
high
residues 269-365
Domain cluster:
rep: NC_054725.1__YP_010059442.1__KHQ85_gp192__00192__D466-576
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26079.1 best | Baseplate_J_C | 32.3 | 1.30e-07 | 94.8% | 95.2% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pjhB02 | 3.10.330.10 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.63 | 47.0 | 4.62e-01 | 99.0% | 73.6% |
| 3e6qA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.61 | 43.0 | 3.99e-01 | 73.2% | 90.5% |
| 2i52B00 | 3.30.1300.20 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 7,8-dihydroneopterin aldolase (MptD) | 0.58 | 46.0 | 4.39e-01 | 86.6% | 81.9% |
| 3napB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 44.0 | 3.36e-01 | 85.6% | 81.8% |
| 4wwtA01 | 3.30.190.20 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribosomal protein L1/L10, rRNA-binding domain | 0.55 | 41.0 | 4.05e-01 | 79.4% | 87.1% |
| 5tl8A00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.53 | 42.0 | 2.78e-01 | 87.6% | 71.1% |
| 1kvdB00 | 3.30.44.10 | Alpha Beta › 2-Layer Sandwich › Smk Toxin, Beta chain › Smk Toxin, beta chain | 0.52 | 37.0 | 4.02e-01 | 78.4% | 96.1% |
| 1j1fA00 | 3.90.730.10 | Alpha Beta › Alpha-Beta Complex › Ribonuclease Rh; Chain A › Ribonuclease T2-like | 0.52 | 40.0 | 3.23e-01 | 82.5% | 85.3% |
| 5n0kA05 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.50 | 41.0 | 3.42e-01 | 91.8% | 85.2% |
| 1iqqA00 | 3.90.730.10 | Alpha Beta › Alpha-Beta Complex › Ribonuclease Rh; Chain A › Ribonuclease T2-like | 0.50 | 41.0 | 3.23e-01 | 87.6% | 94.5% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4957578 | 3228.1.1.2 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C | 0.94 | 84.0 | 8.75e-01 | 100.0% | 100.0% |
| 5004557 | 3228.1.1.0 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III | 0.92 | 86.0 | 8.20e-01 | 99.0% | 99.1% |
| 5002740 | 3228.1.1.0 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III | 0.90 | 85.0 | 8.14e-01 | 100.0% | 98.2% |
| 4453960 | 3228.1.1.2 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C | 0.89 | 71.0 | 7.74e-01 | 96.9% | 100.0% |
| 4093853 | 3228.1.1.2 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C | 0.88 | 72.0 | 7.75e-01 | 99.0% | 100.0% |
| 4565831 | 3228.1.1.2 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C | 0.86 | 75.0 | 7.84e-01 | 99.0% | 100.0% |
| 3943567 | 3228.1.1.0 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III | 0.85 | 80.0 | 7.90e-01 | 97.9% | 100.0% |
| 3977755 | 3228.1.1.2 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C | 0.83 | 69.0 | 7.28e-01 | 97.9% | 100.0% |
| 1870475 | 3228.1.1.2 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C | 0.81 | 68.0 | 7.06e-01 | 100.0% | 95.6% |
| 3313414 | 229.1.1.7 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › TRIP13_N | 0.62 | 50.0 | 5.22e-01 | 100.0% | 97.8% |
| 3322514 | 109.4.1.43 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SAC3_GANP | 0.58 | 47.0 | 3.38e-01 | 87.6% | 31.0% |
| 3684904 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 44.0 | 3.73e-01 | 82.5% | 73.5% |
| 3209734 | 229.1.1.7 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › TRIP13_N | 0.58 | 48.0 | 4.91e-01 | 100.0% | 95.8% |
| 3177482 | 101.1.2.124 ↗ | alpha arrays › HTH › HTH › winged helix domain › Kin17_mid | 0.57 | 43.0 | 3.96e-01 | 79.4% | 73.6% |
| 5047688 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.57 | 46.0 | 4.76e-01 | 97.9% | 97.8% |
| 4979697 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.56 | 42.0 | 4.40e-01 | 99.0% | 87.8% |
| 3222445 | 148.1.3.41 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM5_C | 0.54 | 36.0 | 4.10e-01 | 70.1% | 100.0% |
| 5046136 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 43.0 | 3.86e-01 | 94.8% | 85.0% |
| 5070509 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 36.0 | 3.38e-01 | 74.2% | 82.5% |
| 2126123 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.50 | 37.0 | 3.06e-01 | 84.5% | 41.1% |
| 3820802 | 101.1.2.529 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7599 | 0.50 | 38.0 | 3.71e-01 | 82.5% | 80.0% |