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IMGVR_UViG_3300029775_000005-3300029775-Ga0134843_100058428

Arc-Vir

IMGVR_UViG_3300029775_000005-3300029775-Ga0134843_100058428

Quality

80.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 20-90
PDB
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3kluA01 3.30.2220.30 Alpha Beta › 2-Layer Sandwich › rbstp2171 › 0.83 75.0 6.44e-01 100.0% 86.4%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 43.0 4.19e-01 76.1% 56.4%
2rn7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 35.0 3.59e-01 87.3% 66.7%
1u9pA00 1.10.1220.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like 0.52 36.0 3.29e-01 71.8% 71.9%
1vfrA00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.50 39.0 2.82e-01 84.5% 81.1%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3945607 3547.1.1.2 a+b two layers › uncharacterised protein rbstp2171 › uncharacterised protein rbstp2171 › uncharacterised protein rbstp2171 › Phage_TAC_7 0.78 72.0 6.78e-01 100.0% 91.8%
4010073 101.1.2.368 alpha arrays › HTH › HTH › winged helix domain › HTH_36 0.59 40.0 4.03e-01 78.9% 68.0%
3467958 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.59 35.0 3.52e-01 81.7% 58.6%
3273264 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.57 45.0 3.87e-01 85.9% 85.2%
3704050 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.56 38.0 4.19e-01 91.5% 100.0%
3992048 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.52 34.0 3.71e-01 87.3% 85.5%