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IMGVR_UViG_3300029781_000008-3300029781-Ga0167330_100040315

Arc-Vir

IMGVR_UViG_3300029781_000008-3300029781-Ga0167330_100040315

Quality

75.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 28-98
PDB
Domain cluster: representative
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kvtA00 3.30.730.30 Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein 0.80 57.0 5.78e-01 74.6% 81.7%
1btkA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.75 66.0 5.03e-01 97.2% 56.9%
2aehA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.74 67.0 5.71e-01 98.6% 68.5%
1eazA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.73 64.0 5.63e-01 95.8% 71.8%
3cxbB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.70 60.0 5.33e-01 94.4% 70.9%
1zc3B00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.70 63.0 5.44e-01 100.0% 71.6%
1faoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.70 61.0 5.42e-01 95.8% 70.0%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 58.0 5.02e-01 93.0% 61.5%
4gzuA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 60.0 4.64e-01 95.8% 49.3%
2codA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 60.0 5.37e-01 97.2% 70.8%
2dhkA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 61.0 5.41e-01 98.6% 71.0%
4nswA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 61.0 5.23e-01 98.6% 65.1%
7byjA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 59.0 5.33e-01 95.8% 74.7%
1mgtA01 3.30.160.70 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Methylated DNA-protein cysteine methyltransferase domain 0.67 47.0 4.37e-01 73.2% 59.1%
2l2nA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.67 46.0 4.68e-01 71.8% 74.6%
2d9wA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 56.0 4.82e-01 91.5% 68.2%
3pvlA04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 61.0 5.40e-01 100.0% 71.7%
2cocA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 55.0 4.98e-01 93.0% 71.0%
2rloA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 58.0 4.74e-01 97.2% 74.2%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 57.0 4.93e-01 95.8% 69.4%
2rqlA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.65 48.0 4.36e-01 78.9% 66.3%
1ki1B02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 59.0 4.66e-01 100.0% 57.0%
3f5rA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 53.0 4.56e-01 91.5% 66.4%
2v14A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.64 48.0 3.88e-01 80.3% 76.1%
3fm8D03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 56.0 4.92e-01 100.0% 75.0%
3tqmA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.63 43.0 4.04e-01 71.8% 65.6%
3drnB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.63 50.0 3.97e-01 87.3% 100.0%
1imuA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.62 45.0 3.90e-01 76.1% 50.5%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.61 41.0 3.41e-01 88.7% 40.8%
3gxwC00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.60 41.0 3.72e-01 70.4% 73.0%
4fo5A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.59 46.0 3.75e-01 84.5% 95.6%
5fgoA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 38.0 4.05e-01 77.5% 77.4%
4hasA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.58 42.0 3.74e-01 76.1% 85.6%
2rajA02 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.58 42.0 3.53e-01 77.5% 76.2%
2ywqA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.57 40.0 3.77e-01 74.6% 60.2%
1xteA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.57 43.0 3.69e-01 81.7% 79.3%
1v61A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 47.0 3.90e-01 94.4% 56.1%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.56 50.0 3.91e-01 100.0% 72.1%
2dixA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 40.0 3.94e-01 76.1% 73.1%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 40.0 4.01e-01 74.6% 77.5%
1e8oA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.56 44.0 4.43e-01 98.6% 87.8%
4e5xG00 2.60.40.3530 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 40.0 3.61e-01 78.9% 67.7%
2epbA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 38.0 3.88e-01 78.9% 82.4%
2wp8B00 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.52 45.0 3.27e-01 100.0% 88.5%
4tw1B00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.51 36.0 2.43e-01 73.2% 70.9%
2ltrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 40.0 3.59e-01 90.1% 100.0%
1yq2A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 36.0 3.40e-01 78.9% 90.3%
5xbfA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 43.0 4.06e-01 100.0% 97.7%
ECOD (79)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3903260 109.4.1.2707 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PH_21 0.81 67.0 4.01e-01 100.0% 14.3%
4488977 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.79 74.0 5.75e-01 100.0% 57.9%
4564186 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.78 70.0 5.73e-01 97.2% 62.4%
3867421 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.78 72.0 4.81e-01 100.0% 30.4%
4140296 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.77 68.0 5.38e-01 95.8% 52.1%
5051984 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.76 66.0 5.45e-01 93.0% 60.0%
3234621 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.76 70.0 5.57e-01 100.0% 55.6%
3738714 220.1.1.74 beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H 0.75 65.0 5.65e-01 97.2% 73.6%
4348945 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.75 69.0 5.70e-01 100.0% 62.5%
3584264 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.74 68.0 5.56e-01 100.0% 61.6%
3789602 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.74 68.0 5.54e-01 100.0% 61.6%
5031715 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.74 68.0 5.41e-01 100.0% 57.8%
3276134 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.74 65.0 5.38e-01 97.2% 60.0%
3269253 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.73 67.0 5.64e-01 100.0% 66.1%
3599325 220.1.1.92 beta barrels › PH domain-like › PH domain-like › PH domain-like › Mcp5_PH 0.73 67.0 5.16e-01 100.0% 55.3%
3785687 220.1.1.58 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like 0.73 66.0 5.60e-01 100.0% 73.0%
4112170 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.73 68.0 5.29e-01 100.0% 55.7%
3226939 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.73 65.0 5.82e-01 100.0% 74.0%
3598862 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.72 65.0 5.43e-01 100.0% 76.7%
3592181 220.1.1.74 beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H 0.72 61.0 4.89e-01 93.0% 57.8%
4949986 220.1.1.219 beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.71 63.0 5.43e-01 97.2% 66.4%
3612952 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.71 65.0 4.85e-01 100.0% 44.7%
4964696 220.1.1.219 beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.71 63.0 5.42e-01 100.0% 73.0%
3888963 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.71 64.0 4.09e-01 98.6% 23.1%
3749038 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.71 63.0 4.99e-01 97.2% 72.9%
3930311 220.1.1.176 beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7778 0.71 58.0 4.94e-01 91.5% 59.2%
3810543 220.1.1.20 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.71 64.0 5.51e-01 100.0% 69.1%
4203238 220.1.1.217 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH, GRAM 0.71 63.0 4.23e-01 97.2% 30.4%
4225185 220.1.1.154 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_EXO84 0.71 64.0 4.79e-01 100.0% 54.1%
3707723 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 60.0 5.26e-01 93.0% 65.7%
4938191 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 62.0 5.51e-01 100.0% 81.6%
3906610 220.1.1.170 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_alsin 0.70 64.0 5.04e-01 100.0% 55.7%
3533574 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.70 63.0 4.96e-01 100.0% 53.1%
5007104 220.1.1.219 beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.70 59.0 5.16e-01 93.0% 67.6%
3393858 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 60.0 5.09e-01 94.4% 64.3%
3315491 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 63.0 5.01e-01 100.0% 60.7%
3512851 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 63.0 5.06e-01 100.0% 63.0%
3927128 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 63.0 5.25e-01 100.0% 65.0%
4522783 101.1.2.715 alpha arrays › HTH › HTH › winged helix domain › CheF-arch 0.69 61.0 4.11e-01 100.0% 48.6%
3271442 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.69 64.0 4.91e-01 100.0% 51.3%
4191831 220.1.1.217 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH, GRAM 0.69 63.0 4.18e-01 100.0% 29.8%
3777177 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.69 63.0 5.60e-01 100.0% 75.0%
3210606 220.1.1.58 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like 0.69 62.0 5.11e-01 100.0% 73.6%
3791995 220.1.1.37 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_13 0.69 63.0 4.82e-01 100.0% 57.4%
3627778 220.1.1.64 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C1_MyoVII 0.69 62.0 5.52e-01 100.0% 71.0%
4121439 220.1.1.217 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH, GRAM 0.68 62.0 3.84e-01 100.0% 20.3%
3567815 220.1.1.37 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_13 0.68 62.0 4.67e-01 100.0% 55.8%
3515884 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 60.0 5.05e-01 100.0% 65.0%
3718868 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 59.0 4.66e-01 97.2% 51.0%
4956582 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 53.0 4.47e-01 87.3% 70.4%
3305101 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.67 60.0 4.68e-01 98.6% 54.7%
4026008 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.67 50.0 4.69e-01 78.9% 75.3%
3914585 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.67 55.0 4.85e-01 91.5% 66.7%
3907293 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.66 56.0 5.01e-01 97.2% 69.5%
3771406 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 58.0 4.79e-01 97.2% 67.2%
3718300 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 56.0 5.51e-01 95.8% 97.3%
3176053 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 57.0 4.67e-01 98.6% 63.1%
3564088 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 56.0 4.87e-01 97.2% 68.2%
3740122 220.1.1.92 beta barrels › PH domain-like › PH domain-like › PH domain-like › Mcp5_PH 0.65 58.0 4.70e-01 100.0% 63.2%
5052285 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 54.0 4.82e-01 95.8% 73.3%
3705153 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 54.0 4.49e-01 97.2% 54.8%
3584295 220.1.1.118 beta barrels › PH domain-like › PH domain-like › PH domain-like › RHG20_PH 0.64 58.0 4.78e-01 100.0% 57.6%
3231836 220.1.1.176 beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7778 0.64 55.0 4.40e-01 100.0% 88.7%
3958768 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 52.0 5.06e-01 91.5% 86.3%
3625596 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 57.0 5.50e-01 100.0% 96.2%
3619264 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.63 45.0 4.24e-01 77.5% 67.8%
5015133 4100.1.1.9 a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › DUF7387 0.62 41.0 4.42e-01 74.6% 80.0%
3544563 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 53.0 4.71e-01 97.2% 69.5%
3517888 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.60 42.0 3.89e-01 73.2% 60.0%
3725687 220.1.1.26 beta barrels › PH domain-like › PH domain-like › PH domain-like › Vps36_ESCRT-II 0.60 51.0 4.31e-01 100.0% 56.9%
3519032 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.59 41.0 3.71e-01 71.8% 63.0%
3510695 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.59 40.0 3.87e-01 70.4% 68.8%
5048830 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.57 43.0 3.60e-01 81.7% 78.4%
4966836 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 37.0 4.05e-01 81.7% 85.5%
4954522 878.1.1.1 a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 0.55 42.0 3.85e-01 81.7% 81.9%
3642588 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.54 37.0 3.34e-01 73.2% 98.1%
3299580 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.52 36.0 3.69e-01 71.8% 83.1%
2573726 2004.1.1.199 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23,SbcC_Walker_B 0.52 35.0 2.72e-01 70.4% 32.0%
4493573 4964.1.1.2 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol 0.52 46.0 3.35e-01 100.0% 54.0%