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IMGVR_UViG_3300029799_001633-3300029799-Ga0311022_1408442911
Arc-VirIMGVR_UViG_3300029799_001633-3300029799-Ga0311022_1408442911
Identity
- Kingdom:
- archaea
Quality
73.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-70
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2b4wA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.73 | 47.0 | 3.02e-01 | 74.6% | 15.1% |
| 3k59A01 | 2.40.50.590 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › DNA polymerase B, N domain, beta-barrel | 0.72 | 43.0 | 4.02e-01 | 100.0% | 47.1% |
| 6s8zA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 51.0 | 5.31e-01 | 77.6% | 88.7% |
| 3lygA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 54.0 | 4.40e-01 | 100.0% | 51.7% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 50.0 | 5.02e-01 | 95.5% | 84.1% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 42.0 | 3.95e-01 | 76.1% | 56.8% |
| 2lyxA00 | 3.10.450.390 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 | 0.62 | 44.0 | 4.07e-01 | 74.6% | 60.9% |
| 5hy7B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 45.0 | 2.81e-01 | 80.6% | 14.3% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.60 | 40.0 | 4.52e-01 | 71.6% | 97.9% |
| 1vqzA02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.59 | 33.0 | 3.07e-01 | 71.6% | 42.0% |
| 2mc8A00 | 3.10.450.590 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 40.0 | 3.49e-01 | 74.6% | 75.4% |
| 5ig0A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 51.0 | 4.07e-01 | 98.5% | 70.2% |
| 2uvaG08 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.57 | 47.0 | 3.19e-01 | 95.5% | 83.6% |
| 2qkdA03 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.57 | 37.0 | 4.02e-01 | 70.1% | 86.3% |
| 2k54A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 48.0 | 3.95e-01 | 100.0% | 52.0% |
| 3kspA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 47.0 | 3.84e-01 | 95.5% | 69.8% |
| 3cnxA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 49.0 | 3.91e-01 | 100.0% | 80.4% |
| 1f49A05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.56 | 46.0 | 3.12e-01 | 97.0% | 32.4% |
| 1v2bB00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.55 | 48.0 | 3.76e-01 | 100.0% | 59.6% |
| 1cjxB02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.55 | 41.0 | 2.96e-01 | 100.0% | 26.7% |
| 3ke7B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 48.0 | 3.87e-01 | 98.5% | 60.2% |
| 2r5vB02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.55 | 40.0 | 2.96e-01 | 100.0% | 27.7% |
| 7r97A02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 40.0 | 3.98e-01 | 100.0% | 76.5% |
| 2r4iA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 46.0 | 3.88e-01 | 98.5% | 76.4% |
| 1tu1A00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.54 | 46.0 | 3.69e-01 | 100.0% | 45.8% |
| 4q6lA00 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.54 | 39.0 | 3.24e-01 | 80.6% | 97.8% |
| 4pmwA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 47.0 | 4.25e-01 | 98.5% | 72.5% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.53 | 34.0 | 3.61e-01 | 74.6% | 74.6% |
| 3tw6C01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.53 | 43.0 | 2.64e-01 | 91.0% | 49.6% |
| 3go2A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.53 | 40.0 | 3.42e-01 | 83.6% | 84.2% |
| 2w5nA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.53 | 38.0 | 2.47e-01 | 80.6% | 15.6% |
| 2joxA00 | 2.60.40.4240 | Mainly Beta › Sandwich › Immunoglobulin-like › Transcription activator, Churchill | 0.53 | 44.0 | 3.90e-01 | 100.0% | 62.3% |
| 4uv3E01 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.52 | 42.0 | 3.03e-01 | 89.6% | 66.5% |
| 2pmaA01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.51 | 41.0 | 3.45e-01 | 91.0% | 54.5% |
| 2lnjA00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.51 | 44.0 | 3.33e-01 | 100.0% | 56.5% |
| 2lexA00 | 2.20.25.80 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain | 0.50 | 33.0 | 3.39e-01 | 73.1% | 71.4% |
| 2dleA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 42.0 | 3.99e-01 | 100.0% | 93.0% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4953347 | 375.1.1.299 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf | 0.92 | 61.0 | 7.02e-01 | 70.1% | 92.0% |
| 4981041 | 375.1.1.299 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf | 0.77 | 51.0 | 5.75e-01 | 73.1% | 92.0% |
| 5067458 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 53.0 | 5.69e-01 | 73.1% | 90.9% |
| 5073192 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.73 | 54.0 | 5.56e-01 | 80.6% | 90.8% |
| 1779210 | 2.1.1.112 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNApolII_N | 0.72 | 43.0 | 5.11e-01 | 100.0% | 95.2% |
| 3587082 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.69 | 44.0 | 4.82e-01 | 74.6% | 81.5% |
| 4928898 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.69 | 45.0 | 4.39e-01 | 74.6% | 60.0% |
| 5035327 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 41.0 | 3.83e-01 | 70.1% | 47.1% |
| 3573748 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.68 | 52.0 | 3.51e-01 | 82.1% | 27.3% |
| 4969245 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.67 | 44.0 | 3.41e-01 | 80.6% | 29.7% |
| 3621358 | 375.1.1.7 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C | 0.63 | 42.0 | 4.31e-01 | 70.1% | 70.8% |
| 5012485 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.63 | 44.0 | 4.28e-01 | 73.1% | 70.7% |
| 4998373 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 42.0 | 4.82e-01 | 70.1% | 100.0% |
| 4945816 | 375.1.1.333 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › jr-ZPR1 | 0.62 | 43.0 | 4.71e-01 | 73.1% | 89.1% |
| 4783165 | 5.1.3.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › CyRPA | 0.62 | 41.0 | 3.11e-01 | 79.1% | 27.1% |
| 5054994 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 41.0 | 4.68e-01 | 71.6% | 95.8% |
| 3286982 | 330.6.1.0 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain | 0.61 | 56.0 | 4.79e-01 | 100.0% | 85.6% |
| 5054019 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.61 | 42.0 | 4.23e-01 | 73.1% | 85.7% |
| 4991994 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 41.0 | 4.44e-01 | 71.6% | 90.9% |
| 4976092 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 39.0 | 3.61e-01 | 73.1% | 51.1% |
| 5044978 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.58 | 50.0 | 4.89e-01 | 100.0% | 97.3% |
| 3888828 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 52.0 | 3.89e-01 | 100.0% | 51.6% |
| 3325704 | 5.1.4.222 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta_prop_At2g24240 | 0.57 | 37.0 | 2.36e-01 | 80.6% | 12.4% |
| 1140882 | 5.1.3.24 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › End_beta_propel | 0.56 | 39.0 | 3.41e-01 | 79.1% | 45.5% |
| 2132960 | 2.2.1.4 ↗ | beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › Pertussis_S2S3 | 0.56 | 44.0 | 3.70e-01 | 98.5% | 50.4% |
| 4934762 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.56 | 49.0 | 4.14e-01 | 100.0% | 87.0% |
| 4370053 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.55 | 41.0 | 2.99e-01 | 100.0% | 27.7% |
| 3966821 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.55 | 40.0 | 4.18e-01 | 98.5% | 88.3% |
| 1160828 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.55 | 40.0 | 3.74e-01 | 100.0% | 60.0% |
| 3605539 | 708.1.2.3 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › Yippee-Mis18 | 0.54 | 37.0 | 3.34e-01 | 71.6% | 82.0% |
| 4990926 | 375.1.1.21 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 | 0.54 | 37.0 | 4.16e-01 | 71.6% | 96.0% |
| 4998035 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 35.0 | 3.95e-01 | 70.1% | 92.0% |
| 165299 | 375.1.1.34 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Churchill | 0.53 | 44.0 | 3.90e-01 | 100.0% | 62.3% |
| 5047172 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.52 | 44.0 | 3.39e-01 | 100.0% | 47.1% |
| 4943224 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 37.0 | 2.88e-01 | 100.0% | 31.2% |
| 3983036 | 2484.1.1.119 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS1 | 0.52 | 39.0 | 4.00e-01 | 94.0% | 86.2% |
| 5058112 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.52 | 44.0 | 3.52e-01 | 100.0% | 48.0% |
| 4987012 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.51 | 44.0 | 3.45e-01 | 100.0% | 44.0% |
| 4113597 | 7503.1.1.3 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N | 0.51 | 36.0 | 3.22e-01 | 74.6% | 71.6% |
| 5056578 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.51 | 41.0 | 2.81e-01 | 97.0% | 42.0% |
| 4033933 | 9.9.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein YwiB › Hypothetical protein YwiB › DUF1934 | 0.51 | 44.0 | 3.74e-01 | 100.0% | 80.0% |
| 3560835 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.50 | 44.0 | 2.83e-01 | 100.0% | 86.8% |