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IMGVR_UViG_3300029799_001794-3300029799-Ga0311022_132149431

Arc-Vir

IMGVR_UViG_3300029799_001794-3300029799-Ga0311022_132149431

Identity

Kingdom:
archaea

Quality

91.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-96
PDB
Domain cluster: rep: NC_054725.1__YP_010059442.1__KHQ85_gp192__00192__D466-576
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF26079.1 best Baseplate_J_C 56.9 2.60e-15 95.5% 100.0%
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6lkvA01 3.30.429.10 Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor 0.57 44.0 3.91e-01 84.3% 92.5%
4dh4A00 3.30.429.10 Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor 0.57 43.0 3.97e-01 80.9% 89.5%
2fltA00 3.30.429.10 Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor 0.55 46.0 4.19e-01 89.9% 97.4%
1vw4K00 3.90.1170.10 Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Ribosomal protein L16/L10 0.55 39.0 3.12e-01 74.2% 57.9%
2jv2A00 3.10.330.10 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.55 39.0 4.15e-01 94.4% 88.2%
4qhpA04 2.60.40.1840 Mainly Beta › Sandwich › Immunoglobulin-like › Aminopeptidase N, middle-beta domain 0.51 36.0 3.52e-01 76.4% 95.0%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4957578 3228.1.1.2 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C 0.92 88.0 8.77e-01 100.0% 98.9%
3943567 3228.1.1.0 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III 0.90 84.0 8.03e-01 98.9% 100.0%
5002740 3228.1.1.0 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III 0.87 82.0 7.56e-01 100.0% 97.3%
3977755 3228.1.1.2 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C 0.85 74.0 7.63e-01 97.8% 98.8%
4565831 3228.1.1.2 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C 0.84 77.0 7.68e-01 98.9% 98.9%
1870475 3228.1.1.2 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C 0.84 75.0 7.49e-01 100.0% 94.5%
4453960 3228.1.1.2 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C 0.83 70.0 7.35e-01 97.8% 100.0%
4093853 3228.1.1.2 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C 0.82 71.0 7.34e-01 100.0% 100.0%
3946544 3228.1.1.0 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III 0.81 74.0 6.98e-01 100.0% 96.2%
3754387 315.1.1.1 ↗ a+b two layers › Tautomerase/MIF-like › Tautomerase/MIF › Tautomerase/MIF › MIF 0.68 47.0 4.25e-01 71.9% 91.7%
3215958 315.1.1.1 ↗ a+b two layers › Tautomerase/MIF-like › Tautomerase/MIF › Tautomerase/MIF › MIF 0.62 44.0 4.18e-01 73.0% 100.0%
4057010 3117.1.1.1 ↗ a+b two layers › C-terminal domain of OAT (ornithine acetyltransferase) › C-terminal domain of OAT (ornithine acetyltransferase) › C-terminal domain of OAT (ornithine acetyltransferase) › ArgJ 0.59 52.0 4.75e-01 98.9% 87.5%
3313414 229.1.1.7 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › TRIP13_N 0.59 51.0 5.11e-01 100.0% 96.7%
4884623 315.1.1.6 ↗ a+b two layers › Tautomerase/MIF-like › Tautomerase/MIF › Tautomerase/MIF › Tautomerase_3 0.58 47.0 3.99e-01 87.6% 86.2%
2771782 315.1.1.1 ↗ a+b two layers › Tautomerase/MIF-like › Tautomerase/MIF › Tautomerase/MIF › MIF 0.57 40.0 3.71e-01 73.0% 87.3%
4027277 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 43.0 3.70e-01 82.0% 78.7%
3264333 101.1.2.124 ↗ alpha arrays › HTH › HTH › winged helix domain › Kin17_mid 0.55 41.0 3.69e-01 78.7% 67.2%
3684904 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 41.0 3.42e-01 82.0% 74.1%
4943320 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 39.0 3.62e-01 76.4% 68.3%
4370646 229.1.1.6 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PEX6_4th 0.54 47.0 4.07e-01 100.0% 88.3%
3179915 101.1.2.124 ↗ alpha arrays › HTH › HTH › winged helix domain › Kin17_mid 0.54 40.0 3.58e-01 79.8% 65.4%
4963228 229.1.1.13 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PF25922 0.53 44.0 4.51e-01 98.9% 98.8%
4488173 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 43.0 4.31e-01 91.0% 94.4%
3311291 101.1.2.377 ↗ alpha arrays › HTH › HTH › winged helix domain › MCM5_C 0.52 37.0 3.92e-01 77.5% 85.0%
4930241 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.51 42.0 4.27e-01 97.8% 93.3%