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IMGVR_UViG_3300029822_000014-3300029822-Ga0134854_100051522

Arc-Vir

IMGVR_UViG_3300029822_000014-3300029822-Ga0134854_100051522

Quality

74.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-68
PDB
Domain cluster: representative
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5hy7B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.72 52.0 3.12e-01 75.0% 12.6%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.71 56.0 4.77e-01 100.0% 51.4%
3eb8B01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.69 42.0 4.38e-01 100.0% 65.6%
2ghsA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.68 47.0 3.04e-01 100.0% 15.9%
4ftxB01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.64 53.0 4.30e-01 93.8% 70.3%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 50.0 4.89e-01 100.0% 80.3%
3fhwA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 47.0 4.05e-01 81.2% 85.9%
3voqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 49.0 4.08e-01 89.1% 74.1%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 43.0 4.44e-01 89.1% 79.0%
1omoA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.60 47.0 3.58e-01 84.4% 53.7%
2htaA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.60 53.0 3.44e-01 100.0% 38.0%
7obmA01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.60 54.0 3.39e-01 100.0% 22.7%
4hbrA00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 53.0 4.11e-01 100.0% 46.4%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.59 46.0 4.68e-01 100.0% 87.3%
6qp9B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 53.0 3.15e-01 100.0% 30.4%
3ei3A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 52.0 3.30e-01 100.0% 24.1%
1k90A02 3.90.1760.10 Alpha Beta › Alpha-Beta Complex › Adenylylcyclase toxin fold › Anthrax toxin, edema factor, central domain 0.59 50.0 3.85e-01 98.4% 76.7%
2gcjA01 2.30.29.150 Mainly Beta › Roll › PH-domain like › 0.59 46.0 3.72e-01 89.1% 83.6%
4nsxA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 53.0 3.37e-01 100.0% 22.2%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 51.0 4.86e-01 100.0% 82.9%
3zfnA02 2.30.140.40 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain 0.57 40.0 4.14e-01 82.8% 84.2%
2qc5A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 48.0 3.14e-01 100.0% 21.1%
3d4eA01 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.55 46.0 4.24e-01 93.8% 84.5%
3wyfE00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 46.0 3.59e-01 98.4% 43.0%
3ottB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 47.0 3.02e-01 100.0% 24.1%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.54 42.0 3.53e-01 89.1% 86.7%
1mhmA00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.53 45.0 3.04e-01 95.3% 66.0%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.53 42.0 3.48e-01 87.5% 56.7%
2dmyA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 43.0 3.92e-01 100.0% 72.2%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 37.0 3.56e-01 89.1% 66.7%
5i4dA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 39.0 3.78e-01 85.9% 89.5%
4bhrA00 3.30.1300.70 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.51 45.0 4.22e-01 100.0% 98.8%
1cjxB02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.51 40.0 3.06e-01 100.0% 91.6%
7nn3B01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 35.0 2.32e-01 75.0% 32.0%
ECOD (65)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5059089 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.74 51.0 3.28e-01 100.0% 15.7%
3784224 220.1.1.70 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_5 0.73 53.0 4.17e-01 76.6% 42.3%
3742330 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.72 57.0 4.63e-01 100.0% 47.0%
3941131 5.1.4.36 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.72 50.0 3.13e-01 73.4% 14.3%
3963561 809.1.1.0 a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP 0.71 55.0 5.35e-01 96.9% 75.7%
5044805 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.70 57.0 5.57e-01 100.0% 81.4%
3266642 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.67 55.0 4.15e-01 95.3% 38.1%
4400544 220.1.1.314 beta barrels › PH domain-like › PH domain-like › PH domain-like › PF27447 0.66 48.0 3.98e-01 79.7% 44.0%
3627627 220.1.1.66 beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.66 57.0 4.49e-01 100.0% 46.2%
3553012 5.1.4.661 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR36-Utp21_1st 0.66 49.0 3.09e-01 79.7% 15.2%
3602976 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.66 51.0 5.40e-01 100.0% 96.4%
3250700 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 58.0 4.39e-01 100.0% 60.4%
5014687 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.65 54.0 5.43e-01 100.0% 92.3%
3917232 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.65 59.0 4.02e-01 100.0% 30.5%
4028363 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.64 57.0 5.13e-01 100.0% 77.8%
3449001 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.64 56.0 3.53e-01 100.0% 27.4%
3588678 243.3.1.3 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.64 51.0 5.11e-01 100.0% 89.2%
3633449 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.64 46.0 3.39e-01 76.6% 74.1%
4031403 243.3.1.72 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PF29898 0.64 46.0 5.08e-01 95.3% 98.0%
1170462 243.3.1.3 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.64 50.0 5.13e-01 100.0% 93.4%
3255030 220.1.1.66 beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.63 51.0 4.14e-01 95.3% 45.6%
3769451 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.62 56.0 3.54e-01 100.0% 21.5%
4217719 206.1.1.29 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › DUF4135 0.62 55.0 3.24e-01 100.0% 19.8%
3707783 5.1.10.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.62 53.0 4.61e-01 96.9% 68.0%
4033429 243.3.1.3 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.62 49.0 4.60e-01 100.0% 72.5%
3566576 220.1.1.49 beta barrels › PH domain-like › PH domain-like › PH domain-like › Carm_PH 0.61 48.0 3.65e-01 100.0% 35.0%
3484745 5.1.4.313 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_BBS7 0.61 52.0 3.31e-01 100.0% 19.0%
3545968 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 54.0 2.96e-01 100.0% 6.7%
3239485 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.60 49.0 3.92e-01 96.9% 44.6%
4332836 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 54.0 3.24e-01 100.0% 17.9%
3458192 5.1.3.142 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.59 52.0 3.37e-01 100.0% 26.5%
4927782 243.3.1.3 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.59 47.0 4.82e-01 100.0% 96.7%
3775274 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.59 54.0 3.26e-01 100.0% 22.0%
3682604 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.59 52.0 2.93e-01 100.0% 8.0%
4950402 881.4.1.0 a+b three layers › Mog1p/PsbP-like › C-terminal domain in sigma-E factor regulatory protein rseB › C-terminal domain in sigma-E factor regulatory protein rseB 0.59 48.0 3.89e-01 92.2% 73.8%
3426652 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.59 51.0 3.31e-01 100.0% 24.2%
4295947 3844.1.1.1 a+b two layers › hydrogenase expression protein-like › hydrogenase expression protein-like › hydrogenase expression protein › HupH_C 0.59 46.0 3.94e-01 89.1% 54.5%
3238618 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.58 53.0 3.24e-01 100.0% 21.7%
2772633 71.1.1.15 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › UCP033729 0.58 47.0 3.41e-01 87.5% 57.6%
4957121 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 45.0 4.55e-01 96.9% 84.6%
3571692 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.58 52.0 3.20e-01 100.0% 24.1%
3244934 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.57 49.0 3.09e-01 95.3% 19.5%
3618512 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.57 44.0 3.00e-01 98.4% 21.6%
4001937 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.57 51.0 3.42e-01 100.0% 36.7%
3439608 5.1.4.219 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DPPIV_N 0.57 49.0 3.01e-01 100.0% 27.9%
3708813 5.1.4.167 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR19_1st 0.57 51.0 3.10e-01 100.0% 17.1%
4946341 5.1.10.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.56 48.0 3.30e-01 100.0% 25.7%
3259368 5.1.11.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed 0.56 50.0 2.99e-01 100.0% 14.1%
3484104 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.56 50.0 3.46e-01 100.0% 35.7%
3451989 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.55 50.0 3.15e-01 100.0% 23.4%
3811378 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.55 46.0 2.99e-01 100.0% 24.6%
4033432 243.3.1.3 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.55 41.0 4.17e-01 96.9% 90.0%
3170663 12.3.1.19 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.55 48.0 3.03e-01 100.0% 38.6%
3523834 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.55 48.0 2.99e-01 100.0% 20.0%
3903260 109.4.1.2707 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PH_21 0.55 39.0 2.36e-01 87.5% 10.7%
3293351 331.3.1.1 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Bet_v_1 0.54 47.0 3.74e-01 92.2% 68.3%
5036897 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.54 45.0 3.59e-01 100.0% 45.5%
3788776 5.1.4.38 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.54 48.0 3.03e-01 100.0% 21.8%
3522270 5.1.1.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › Hemopexin 0.54 43.0 3.07e-01 100.0% 29.2%
3935357 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 42.0 3.48e-01 89.1% 65.8%
3420257 5.1.2.55 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › FBA_3 0.53 45.0 3.06e-01 100.0% 27.9%
3260465 219.1.1.6 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.52 47.0 3.00e-01 100.0% 58.7%
4237612 3006.1.1.6 a+b two layers › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › CPSF73-100_C 0.52 38.0 3.47e-01 95.3% 58.8%
4852223 10.1.1.26 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C 0.51 44.0 3.50e-01 95.3% 97.7%
3251374 10.1.1.35 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.51 35.0 2.49e-01 100.0% 20.0%