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IMGVR_UViG_3300029822_000014-3300029822-Ga0134854_100051555
Arc-VirIMGVR_UViG_3300029822_000014-3300029822-Ga0134854_100051555
Identity
- Kingdom:
- archaea
Quality
78.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-56
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1bazC00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.85 | 64.0 | 6.45e-01 | 85.1% | 82.6% |
| 3h87D01 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.85 | 59.0 | 5.33e-01 | 74.5% | 55.4% |
| 3qoqC00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.72 | 55.0 | 5.46e-01 | 85.1% | 83.7% |
| 2an7A00 | 6.10.180.10 | Special › Helix non-globular › Arc Repressor Mutant › Antitoxin ParD | 0.70 | 50.0 | 4.19e-01 | 83.0% | 43.4% |
| 4bjqA00 | 1.10.150.770 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.70 | 46.0 | 3.93e-01 | 72.3% | 41.0% |
| 3g8yA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.66 | 48.0 | 2.87e-01 | 80.9% | 24.3% |
| 2i44B00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.63 | 49.0 | 2.99e-01 | 85.1% | 44.9% |
| 2fmyA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 51.0 | 4.26e-01 | 91.5% | 61.0% |
| 2hxiA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 45.0 | 4.08e-01 | 78.7% | 62.5% |
| 3l4gC01 | 3.30.1370.240 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.60 | 42.0 | 3.32e-01 | 76.6% | 56.2% |
| 5o3zL00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 42.0 | 2.71e-01 | 78.7% | 26.6% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4160127 | 101.1.11.117 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › VirD1 | 0.87 | 66.0 | 6.46e-01 | 80.9% | 76.0% |
| 2832012 | 101.1.11.30 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › FitA-like_RHH | 0.82 | 62.0 | 6.38e-01 | 83.0% | 88.6% |
| 4339464 | 101.1.11.119 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › CopG_antitoxin | 0.78 | 59.0 | 5.32e-01 | 83.0% | 60.0% |
| 4878479 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.75 | 54.0 | 4.25e-01 | 80.9% | 37.0% |
| 184522 | 101.1.11.14 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › ParD | 0.72 | 50.0 | 5.34e-01 | 83.0% | 89.7% |
| 3399392 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.71 | 51.0 | 4.67e-01 | 78.7% | 56.9% |