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IMGVR_UViG_3300029822_000130-3300029822-Ga0134854_100233517
Arc-VirIMGVR_UViG_3300029822_000130-3300029822-Ga0134854_100233517
Identity
- Kingdom:
- archaea
Quality
79.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-137
Domain cluster:
rep: IMGVR_UViG_3300005099_000002-3300005099-Ga0072682_1005676__D4-125
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wzpP01 | 2.40.30.210 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.72 | 54.0 | 5.94e-01 | 100.0% | 93.6% |
| 2rjzA02 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.66 | 41.0 | 4.67e-01 | 100.0% | 81.8% |
| 2bbeA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 33.0 | 3.73e-01 | 84.7% | 61.2% |
| 2e9wB05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 34.0 | 3.96e-01 | 90.8% | 70.3% |
| 3eaaA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.64 | 57.0 | 5.27e-01 | 100.0% | 77.2% |
| 3tvjB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.64 | 40.0 | 4.37e-01 | 100.0% | 75.7% |
| 1y12B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.64 | 54.0 | 5.12e-01 | 100.0% | 76.9% |
| 4divV01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.62 | 53.0 | 5.23e-01 | 100.0% | 88.3% |
| 7k0xA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 30.0 | 3.82e-01 | 90.8% | 78.2% |
| 4o2zA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.61 | 37.0 | 3.52e-01 | 91.6% | 51.0% |
| 3w7bA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 33.0 | 3.87e-01 | 89.3% | 77.3% |
| 6vh5C03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 33.0 | 3.84e-01 | 92.4% | 76.4% |
| 5fiiB00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 31.0 | 3.89e-01 | 87.0% | 82.1% |
| 3pg1A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 39.0 | 3.96e-01 | 100.0% | 65.9% |
| 3gz7B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 31.0 | 3.50e-01 | 84.0% | 64.3% |
| 2w59A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 33.0 | 3.71e-01 | 90.8% | 69.0% |
| 2dt9A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.59 | 31.0 | 3.78e-01 | 87.8% | 79.7% |
| 3bm7A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 33.0 | 3.59e-01 | 71.8% | 65.1% |
| 3q0bX00 | 2.30.280.10 | Mainly Beta › Roll › PUA domain-like › SRA-YDG | 0.59 | 46.0 | 4.47e-01 | 100.0% | 73.6% |
| 2od6C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 32.0 | 3.51e-01 | 83.2% | 64.5% |
| 1lp9E02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 29.0 | 3.58e-01 | 90.1% | 77.5% |
| 1fp5A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 32.0 | 3.59e-01 | 90.8% | 70.0% |
| 3e3pA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 31.0 | 3.90e-01 | 87.8% | 89.7% |
| 4f0qD01 | 2.30.280.20 | Mainly Beta › Roll › PUA domain-like › | 0.55 | 50.0 | 4.00e-01 | 100.0% | 56.9% |
| 3kg0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 30.0 | 3.44e-01 | 94.7% | 71.1% |
| 2x1wL02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 31.0 | 3.41e-01 | 91.6% | 68.6% |
| 1k8wA01 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.53 | 44.0 | 3.64e-01 | 89.3% | 53.1% |
| 6ue9L02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 31.0 | 3.25e-01 | 90.8% | 59.8% |
| 3o4oB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 31.0 | 3.34e-01 | 90.1% | 69.7% |
| 2ptfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 42.0 | 4.04e-01 | 100.0% | 76.2% |
| 4za1C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 26.0 | 2.99e-01 | 83.2% | 62.0% |
| 1el6A02 | 2.20.20.20 | Mainly Beta › Single Sheet › Anthopleurin-A › Baseplate structural protein gp11, C-terminal domain | 0.52 | 21.0 | 3.21e-01 | 98.5% | 100.0% |
| 1xmbA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 32.0 | 3.54e-01 | 91.6% | 79.2% |
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.51 | 43.0 | 4.31e-01 | 100.0% | 89.7% |
| 1sqeA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 27.0 | 2.95e-01 | 84.0% | 62.4% |
| 3lvtA03 | 2.60.40.2210 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 33.0 | 3.40e-01 | 100.0% | 68.2% |
| 3eniC00 | 2.50.10.10 | Mainly Beta › Clam › Bacteriochlorophyll-a Protein › Bacteriochlorophyll A | 0.50 | 45.0 | 3.32e-01 | 100.0% | 40.7% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4059301 | 1.1.13.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like | 0.80 | 63.0 | 6.83e-01 | 100.0% | 96.4% |
| 3587074 | 1.1.13.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_N | 0.75 | 56.0 | 6.12e-01 | 100.0% | 92.7% |
| 3823591 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.74 | 38.0 | 4.36e-01 | 90.1% | 66.0% |
| 4957562 | 1.1.13.76 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF6046 | 0.74 | 57.0 | 6.16e-01 | 100.0% | 95.5% |
| 4929634 | 1.1.5.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 | 0.73 | 57.0 | 4.46e-01 | 100.0% | 40.0% |
| 3058416 | 1.1.5.39 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › TssD | 0.72 | 57.0 | 5.78e-01 | 100.0% | 84.3% |
| 3164699 | 1.1.13.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DNA_circ_N | 0.70 | 57.0 | 6.02e-01 | 100.0% | 96.5% |
| 3943691 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.69 | 47.0 | 5.34e-01 | 98.5% | 94.7% |
| 3948350 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.67 | 48.0 | 5.40e-01 | 100.0% | 97.0% |
| 5062396 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.66 | 59.0 | 5.79e-01 | 94.7% | 97.1% |
| 2674670 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.66 | 57.0 | 5.18e-01 | 100.0% | 71.5% |
| 5003885 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.65 | 56.0 | 5.48e-01 | 100.0% | 84.8% |
| 5022644 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.65 | 36.0 | 4.08e-01 | 93.9% | 71.6% |
| 3909822 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.65 | 46.0 | 4.97e-01 | 94.7% | 86.4% |
| 3059162 | 1.1.13.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_GP41 | 0.65 | 54.0 | 5.58e-01 | 100.0% | 92.7% |
| 3386856 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.65 | 35.0 | 4.18e-01 | 90.8% | 78.8% |
| 4957560 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.65 | 54.0 | 5.50e-01 | 100.0% | 91.5% |
| 3936663 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.65 | 45.0 | 4.65e-01 | 96.9% | 75.2% |
| 4157825 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.65 | 54.0 | 5.47e-01 | 100.0% | 91.5% |
| 136185 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.64 | 57.0 | 5.27e-01 | 100.0% | 77.2% |
| 3740961 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.64 | 31.0 | 3.71e-01 | 85.5% | 67.8% |
| 4988100 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.63 | 52.0 | 5.35e-01 | 100.0% | 95.2% |
| 4964155 | 1.1.9.31 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › SRA_ScoMcrA | 0.61 | 47.0 | 4.65e-01 | 100.0% | 75.7% |
| 3731186 | 872.1.1.0 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like | 0.61 | 33.0 | 4.32e-01 | 83.2% | 97.1% |
| 4923979 | 304.102.1.5 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,DKCLD,TruB_C_2 | 0.61 | 41.0 | 3.70e-01 | 88.5% | 48.7% |
| 3595076 | 304.102.1.0 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase | 0.60 | 43.0 | 3.41e-01 | 88.5% | 35.2% |
| 2575510 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 33.0 | 3.77e-01 | 92.4% | 72.3% |
| 3428351 | 304.102.1.6 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 | 0.60 | 41.0 | 3.65e-01 | 89.3% | 47.2% |
| 3710599 | 304.102.1.5 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,DKCLD,TruB_C_2 | 0.60 | 42.0 | 3.38e-01 | 88.5% | 35.2% |
| 3687652 | 872.1.1.0 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like | 0.60 | 31.0 | 4.13e-01 | 83.2% | 94.3% |
| 3807657 | 304.102.1.6 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 | 0.59 | 45.0 | 3.67e-01 | 80.2% | 74.8% |
| 4034209 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.59 | 54.0 | 5.41e-01 | 100.0% | 97.0% |
| 5011413 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.59 | 32.0 | 3.70e-01 | 91.6% | 74.4% |
| 3451490 | 1.1.9.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › SAD_SRA | 0.58 | 48.0 | 4.09e-01 | 100.0% | 54.0% |
| 3836146 | 1.1.9.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › SAD_SRA | 0.58 | 50.0 | 4.86e-01 | 100.0% | 84.1% |
| 4234397 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.58 | 31.0 | 3.45e-01 | 96.2% | 65.0% |
| 3831982 | 1.1.9.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › SAD_SRA | 0.58 | 48.0 | 4.13e-01 | 100.0% | 56.2% |
| 4928572 | 304.8.1.108 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PDT | 0.57 | 31.0 | 2.82e-01 | 92.4% | 36.8% |
| 2771056 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.57 | 32.0 | 3.62e-01 | 92.4% | 71.9% |
| 3835994 | 304.102.1.1 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 | 0.56 | 35.0 | 3.15e-01 | 89.3% | 42.6% |
| 3218711 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.56 | 30.0 | 3.27e-01 | 90.1% | 61.0% |
| 4956118 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.56 | 30.0 | 3.63e-01 | 93.1% | 77.6% |
| 4052592 | 304.102.1.6 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 | 0.56 | 46.0 | 3.83e-01 | 87.8% | 56.1% |
| 4255072 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.56 | 45.0 | 3.92e-01 | 88.5% | 56.4% |
| 4197078 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.55 | 45.0 | 4.19e-01 | 88.5% | 75.9% |
| 4331416 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.55 | 45.0 | 3.81e-01 | 87.8% | 59.5% |
| 4996950 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.55 | 31.0 | 3.19e-01 | 93.9% | 53.1% |
| 4246284 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.55 | 45.0 | 3.81e-01 | 88.5% | 57.3% |
| 3754223 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.55 | 45.0 | 3.63e-01 | 88.5% | 50.6% |
| 3465961 | 304.102.1.6 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 | 0.55 | 43.0 | 3.68e-01 | 89.3% | 50.9% |
| 3910402 | 304.102.1.6 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 | 0.55 | 44.0 | 3.64e-01 | 87.8% | 52.7% |
| 3678951 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.54 | 45.0 | 3.73e-01 | 89.3% | 55.7% |
| 3540649 | 11.1.1.789 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › KIAA1549 | 0.54 | 38.0 | 4.01e-01 | 90.1% | 80.0% |
| 4462681 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.54 | 43.0 | 3.67e-01 | 87.0% | 60.0% |
| 5039332 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.53 | 43.0 | 3.48e-01 | 88.5% | 52.3% |
| 3415867 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.53 | 43.0 | 3.54e-01 | 88.5% | 56.3% |
| 4129961 | 304.102.1.6 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 | 0.52 | 43.0 | 3.56e-01 | 88.5% | 54.9% |
| 4124427 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.52 | 42.0 | 3.53e-01 | 88.5% | 54.9% |
| 4002415 | 389.2.1.3 ↗ | few secondary structure elements › EGF-like › Serine protease inhibitors › Serine protease inhibitors › TIL_2 | 0.51 | 21.0 | 2.72e-01 | 71.8% | 64.6% |
| 3990367 | 389.4.1.7 ↗ | few secondary structure elements › EGF-like › Fibulin-4 EGF-like 1 domain › Fibulin-4 EGF-like 1 domain › TIL_2 | 0.51 | 21.0 | 2.57e-01 | 84.7% | 53.8% |
| 3487364 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.50 | 32.0 | 3.33e-01 | 90.8% | 66.4% |