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IMGVR_UViG_3300029822_000571-3300029822-Ga0134854_10043229
Arc-VirIMGVR_UViG_3300029822_000571-3300029822-Ga0134854_10043229
Identity
- Kingdom:
- archaea
Quality
91.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-75
Domain cluster:
representative
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yfmA02 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.80 | 54.0 | 3.61e-01 | 70.7% | 20.8% |
| 1j5wA02 | 1.20.58.180 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 | 0.77 | 56.0 | 5.56e-01 | 86.7% | 74.0% |
| 1l8dA00 | 1.10.287.510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.76 | 52.0 | 4.62e-01 | 70.7% | 84.5% |
| 4dmvA01 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 53.0 | 5.13e-01 | 85.3% | 64.7% |
| 1m5iA00 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.73 | 50.0 | 4.40e-01 | 70.7% | 89.5% |
| 2vkjA00 | 1.20.58.2030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 42.0 | 3.70e-01 | 86.7% | 42.5% |
| 6vw7B03 | 1.20.1440.230 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain | 0.69 | 47.0 | 4.56e-01 | 86.7% | 63.1% |
| 4y9jA01 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.68 | 48.0 | 3.84e-01 | 74.7% | 42.3% |
| 1yjgA00 | 1.20.120.240 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Lipoprotein, type 6 | 0.68 | 56.0 | 4.41e-01 | 90.7% | 84.1% |
| 4by6A01 | 1.25.40.790 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.68 | 59.0 | 4.05e-01 | 100.0% | 28.5% |
| 1z9eA00 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.67 | 47.0 | 4.59e-01 | 90.7% | 66.3% |
| 2ra1A01 | 1.20.58.790 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 56.0 | 5.13e-01 | 92.0% | 84.7% |
| 4gltA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.66 | 55.0 | 4.80e-01 | 92.0% | 67.5% |
| 4mk3A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.65 | 54.0 | 4.73e-01 | 92.0% | 67.8% |
| 1xeqB00 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.65 | 55.0 | 5.33e-01 | 96.0% | 84.7% |
| 4xt1A00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.65 | 46.0 | 3.07e-01 | 74.7% | 19.6% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 54.0 | 4.60e-01 | 92.0% | 80.8% |
| 4id0A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.64 | 53.0 | 4.64e-01 | 92.0% | 67.0% |
| 2hydA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.64 | 54.0 | 3.67e-01 | 100.0% | 43.7% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.63 | 44.0 | 4.01e-01 | 74.7% | 81.1% |
| 2dkwA00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.62 | 44.0 | 3.71e-01 | 74.7% | 80.2% |
| 1rq0A01 | 6.10.140.160 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 42.0 | 4.08e-01 | 70.7% | 62.7% |
| 3aeiA00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.62 | 44.0 | 4.10e-01 | 74.7% | 76.6% |
| 3cuxA02 | 1.20.1220.12 | Mainly Alpha › Up-down Bundle › Malate Synthase G; Chain: A; Domain 4 › Malate synthase, domain III | 0.62 | 54.0 | 4.69e-01 | 100.0% | 72.7% |
| 1f5xA00 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.62 | 47.0 | 3.49e-01 | 84.0% | 46.2% |
| 3x17A02 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.61 | 56.0 | 3.39e-01 | 98.7% | 40.1% |
| 4l3uA00 | 1.20.1480.40 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › Uncharacterised protein PF16133, DUF4844 | 0.60 | 49.0 | 4.15e-01 | 97.3% | 53.7% |
| 2pvqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 50.0 | 4.48e-01 | 92.0% | 67.0% |
| 1rh5A00 | 1.10.3370.10 | Mainly Alpha › Orthogonal Bundle › Preprotein translocase SecY subunit › SecY subunit domain | 0.60 | 52.0 | 3.31e-01 | 100.0% | 46.8% |
| 1cunA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 49.0 | 4.47e-01 | 92.0% | 83.3% |
| 7jpjB01 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.60 | 45.0 | 3.16e-01 | 97.3% | 24.8% |
| 3ce9A02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.59 | 53.0 | 3.92e-01 | 100.0% | 51.0% |
| 5ts9B00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.59 | 51.0 | 4.02e-01 | 97.3% | 91.9% |
| 1w07A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.59 | 43.0 | 3.37e-01 | 78.7% | 47.6% |
| 6qj2A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 45.0 | 2.92e-01 | 84.0% | 28.9% |
| 3ja8601 | 3.30.1640.10 | Alpha Beta › 2-Layer Sandwich › mini-chromosome maintenance (MCM) complex, chain A, domain 1 › mini-chromosome maintenance (MCM) complex, chain A, domain 1 | 0.58 | 51.0 | 4.56e-01 | 98.7% | 83.8% |
| 2fgyA01 | 1.20.120.1310 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Carboxysome Shell Carbonic Anhydrase, N-terminal helical domain | 0.58 | 39.0 | 3.54e-01 | 70.7% | 73.8% |
| 1gzsB00 | 1.10.4120.10 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › SopE-like, GEF domain | 0.57 | 50.0 | 3.91e-01 | 100.0% | 80.0% |
| 4w66B00 | 1.20.1050.130 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.57 | 48.0 | 3.55e-01 | 100.0% | 55.9% |
| 1fs7A01 | 1.10.1130.10 | Mainly Alpha › Orthogonal Bundle › Flavocytochrome C3; Chain A, domain 2 › Flavocytochrome C3; Chain A | 0.56 | 41.0 | 2.78e-01 | 78.7% | 94.6% |
| 3hwcA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.56 | 51.0 | 3.63e-01 | 100.0% | 63.3% |
| 3r4iA02 | 6.10.140.960 | Special › Helix non-globular › Helix Hairpins › | 0.55 | 40.0 | 4.38e-01 | 90.7% | 96.7% |
| 4bujE03 | 1.10.3380.30 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › | 0.51 | 42.0 | 3.05e-01 | 90.7% | 64.1% |
| 2wzvA01 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.50 | 44.0 | 3.21e-01 | 100.0% | 69.3% |
ECOD (69)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5021529 | 604.39.1.9 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › Vut_1 | 0.89 | 83.0 | 5.82e-01 | 100.0% | 47.1% |
| 4953068 | 604.39.1.9 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › Vut_1 | 0.89 | 83.0 | 5.92e-01 | 100.0% | 48.7% |
| 4954172 | 604.39.1.9 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › Vut_1 | 0.87 | 80.0 | 5.74e-01 | 98.7% | 49.2% |
| 5016489 | 604.39.1.9 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › Vut_1 | 0.87 | 81.0 | 5.78e-01 | 100.0% | 47.0% |
| 4565825 | 604.39.1.9 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › Vut_1 | 0.86 | 79.0 | 5.72e-01 | 100.0% | 38.5% |
| 4034151 | 604.39.1.9 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › Vut_1 | 0.86 | 79.0 | 5.55e-01 | 100.0% | 44.2% |
| 4942860 | 604.12.1.136 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Vut_1 | 0.84 | 77.0 | 5.44e-01 | 100.0% | 47.9% |
| 3978390 | 604.39.1.0 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters | 0.83 | 76.0 | 5.58e-01 | 100.0% | 50.8% |
| 3942411 | 604.39.1.9 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › Vut_1 | 0.83 | 76.0 | 5.37e-01 | 100.0% | 44.8% |
| 4020958 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.77 | 72.0 | 4.55e-01 | 100.0% | 44.7% |
| 5047150 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.76 | 52.0 | 3.73e-01 | 70.7% | 97.0% |
| 3202986 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.76 | 52.0 | 4.32e-01 | 70.7% | 60.8% |
| 5032886 | 2004.1.1.293 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15 | 0.75 | 51.0 | 2.92e-01 | 70.7% | 15.0% |
| 3690513 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.74 | 51.0 | 4.11e-01 | 70.7% | 57.1% |
| 4981980 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.72 | 52.0 | 4.43e-01 | 74.7% | 69.6% |
| 4887090 | 3834.1.1.1 ↗ | alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA_TcB_BD | 0.72 | 49.0 | 3.11e-01 | 70.7% | 33.6% |
| 3731984 | 180.1.1.1 ↗ | alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › PAP2 | 0.71 | 63.0 | 4.73e-01 | 100.0% | 76.8% |
| 3819765 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.71 | 48.0 | 3.74e-01 | 70.7% | 34.4% |
| 4135738 | 7011.1.1.6 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › Wzy_C | 0.70 | 59.0 | 3.74e-01 | 96.0% | 32.0% |
| 3417291 | 109.4.1.359 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Exo70_C | 0.69 | 62.0 | 3.69e-01 | 100.0% | 15.1% |
| 3569305 | 109.4.1.1158 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_IPO11 | 0.69 | 54.0 | 3.37e-01 | 89.3% | 15.1% |
| 3214883 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.69 | 52.0 | 4.06e-01 | 81.3% | 49.4% |
| 4457710 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.68 | 46.0 | 3.98e-01 | 70.7% | 82.5% |
| 4096488 | 3291.1.1.52 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Neurensin | 0.68 | 47.0 | 3.89e-01 | 72.0% | 53.8% |
| 3972810 | 7011.1.1.6 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › Wzy_C | 0.68 | 61.0 | 3.76e-01 | 98.7% | 30.1% |
| 3678611 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.68 | 55.0 | 5.39e-01 | 86.7% | 96.2% |
| 3500478 | 109.4.1.140 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NatB_MDM20 | 0.67 | 53.0 | 3.56e-01 | 86.7% | 22.9% |
| 5023516 | 3922.1.1.269 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Rad50_zn_hook | 0.67 | 46.0 | 3.21e-01 | 70.7% | 34.5% |
| 4073860 | 5086.1.1.67 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › Neurensin | 0.67 | 46.0 | 3.75e-01 | 70.7% | 61.5% |
| 3980912 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.67 | 59.0 | 5.09e-01 | 97.3% | 79.1% |
| 4084484 | 6155.1.1.17 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › LAB_N | 0.67 | 51.0 | 5.16e-01 | 81.3% | 81.3% |
| 4986986 | 3633.1.1.0 ↗ | alpha duplicates or obligate multimers › Haptoglobin-hemoglobin receptor › Haptoglobin-hemoglobin receptor › Haptoglobin-hemoglobin receptor | 0.67 | 45.0 | 3.29e-01 | 70.7% | 25.9% |
| 4962833 | 603.7.1.0 ↗ | alpha bundles › STAT-like › Ammonia monooxygenase subunit C › Ammonia monooxygenase subunit C | 0.67 | 58.0 | 4.46e-01 | 100.0% | 49.7% |
| 3739470 | 192.2.1.31 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › PRA1 | 0.66 | 49.0 | 3.95e-01 | 80.0% | 41.4% |
| 3459205 | 5.1.4.156 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Ge1_WD40 | 0.65 | 46.0 | 2.66e-01 | 73.3% | 21.2% |
| 3416428 | 633.6.1.8 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX_C_alpha1 | 0.65 | 48.0 | 3.65e-01 | 78.7% | 44.4% |
| 3485296 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.65 | 45.0 | 4.04e-01 | 72.0% | 80.0% |
| 3859550 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.65 | 45.0 | 3.86e-01 | 72.0% | 58.3% |
| 3787647 | 192.2.1.31 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › PRA1 | 0.65 | 48.0 | 4.40e-01 | 80.0% | 60.0% |
| 3930703 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.65 | 41.0 | 3.82e-01 | 70.7% | 49.0% |
| 3732909 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.64 | 52.0 | 5.19e-01 | 92.0% | 88.7% |
| 4940192 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.64 | 45.0 | 3.95e-01 | 74.7% | 61.4% |
| 60305 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.64 | 44.0 | 3.95e-01 | 72.0% | 79.2% |
| 3790376 | 109.4.1.1636 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › C12orf66_like | 0.64 | 55.0 | 3.85e-01 | 100.0% | 65.8% |
| 3741919 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.64 | 45.0 | 4.12e-01 | 74.7% | 89.0% |
| 3385713 | 5069.1.1.2 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Ni_hydr_CYTB | 0.63 | 52.0 | 3.82e-01 | 93.3% | 79.5% |
| 3734478 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 54.0 | 3.76e-01 | 100.0% | 96.3% |
| 3920013 | 633.6.1.8 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX_C_alpha1 | 0.63 | 45.0 | 3.42e-01 | 77.3% | 41.1% |
| 3636752 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 51.0 | 4.33e-01 | 88.0% | 91.7% |
| 3248833 | 633.6.1.8 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX_C_alpha1 | 0.62 | 45.0 | 3.48e-01 | 77.3% | 39.4% |
| 3509201 | 1008.1.1.1 ↗ | alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36_C | 0.62 | 44.0 | 4.28e-01 | 74.7% | 82.4% |
| 3460270 | 603.1.1.143 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › DUF547 | 0.61 | 55.0 | 4.03e-01 | 100.0% | 97.1% |
| 5038910 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.60 | 40.0 | 2.77e-01 | 74.7% | 20.0% |
| 5037416 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.60 | 47.0 | 3.06e-01 | 88.0% | 71.6% |
| 3938199 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.60 | 49.0 | 3.77e-01 | 90.7% | 44.6% |
| 3761667 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.59 | 40.0 | 3.97e-01 | 72.0% | 68.8% |
| 3819100 | 109.4.1.1556 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cohesin_HEAT, PDS5 | 0.58 | 50.0 | 2.82e-01 | 97.3% | 21.0% |
| 3487728 | 6171.1.1.0 ↗ | alpha bundles › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases | 0.58 | 49.0 | 4.10e-01 | 100.0% | 52.9% |
| 4218967 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.58 | 51.0 | 3.35e-01 | 100.0% | 79.7% |
| 3896924 | 320.4.1.5 ↗ | a+b two layers › R3H domain-like › PUB domain › PUB domain › Gasdermin_C | 0.58 | 50.0 | 3.71e-01 | 100.0% | 42.9% |
| 4142133 | 133.1.1.7 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › PF28625 | 0.57 | 48.0 | 3.84e-01 | 97.3% | 47.3% |
| 4028894 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.56 | 47.0 | 2.91e-01 | 98.7% | 45.0% |
| 3677363 | 5054.1.1.59 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 | 0.56 | 47.0 | 3.24e-01 | 97.3% | 49.8% |
| 3413139 | 3542.1.1.3 ↗ | alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Peptidase_A22B | 0.56 | 49.0 | 3.28e-01 | 100.0% | 44.4% |
| 3509208 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.56 | 33.0 | 3.27e-01 | 74.7% | 56.2% |
| 4190838 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.55 | 45.0 | 4.16e-01 | 96.0% | 80.0% |
| 3201554 | 150.1.1.98 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Vwaint | 0.53 | 43.0 | 3.81e-01 | 96.0% | 78.3% |
| 3403757 | 210.2.1.1 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C | 0.52 | 41.0 | 2.60e-01 | 85.3% | 49.2% |
| 3102719 | 4156.1.1.0 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like | 0.51 | 41.0 | 3.25e-01 | 92.0% | 86.2% |
D2
medium
residues 76-170
Domain cluster:
rep: KY629621.2__AQY55391.1__MS1_77__00077__D84-171
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02592.21 best | Vut_1 | 40.3 | 5.90e-10 | 99.0% | 55.9% |
CATH (50)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4m5bA00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.71 | 63.0 | 4.87e-01 | 100.0% | 94.4% |
| 2oauA01 | 1.10.287.1260 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.70 | 54.0 | 5.28e-01 | 82.1% | 75.5% |
| 3ucaA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.69 | 62.0 | 4.45e-01 | 98.9% | 59.9% |
| 4rfsS00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.69 | 62.0 | 5.01e-01 | 100.0% | 61.5% |
| 2zy9A03 | 1.10.357.20 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › SLC41 divalent cation transporters, integral membrane domain | 0.69 | 60.0 | 4.97e-01 | 97.9% | 56.9% |
| 3wvoC02 | 1.10.132.100 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.68 | 55.0 | 5.02e-01 | 89.5% | 71.5% |
| 3kcuD00 | 1.20.1080.10 | Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. | 0.68 | 58.0 | 4.22e-01 | 92.6% | 71.0% |
| 6lumG01 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.68 | 53.0 | 5.06e-01 | 84.2% | 90.2% |
| 7dluA01 | 1.10.287.1260 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.67 | 51.0 | 5.00e-01 | 81.1% | 73.3% |
| 4kk2B00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.66 | 59.0 | 4.06e-01 | 100.0% | 52.7% |
| 6i9kA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.66 | 51.0 | 3.56e-01 | 83.2% | 31.9% |
| 2e87A01 | 1.20.120.1190 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.66 | 54.0 | 4.52e-01 | 88.4% | 67.5% |
| 2azjA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.66 | 59.0 | 4.23e-01 | 100.0% | 54.3% |
| 2oerA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.65 | 57.0 | 4.58e-01 | 95.8% | 77.1% |
| 4q2cA01 | 1.10.3210.30 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › | 0.64 | 54.0 | 3.97e-01 | 93.7% | 71.5% |
| 4xt1A00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.63 | 50.0 | 3.62e-01 | 87.4% | 33.3% |
| 5zbqA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.62 | 50.0 | 3.60e-01 | 88.4% | 42.2% |
| 4wk5A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.62 | 55.0 | 4.00e-01 | 97.9% | 59.4% |
| 2c0kB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.61 | 53.0 | 4.53e-01 | 93.7% | 88.6% |
| 7xk2R01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.61 | 47.0 | 3.46e-01 | 83.2% | 37.0% |
| 7sf8A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.61 | 49.0 | 3.68e-01 | 87.4% | 39.0% |
| 2z73B01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.61 | 50.0 | 3.45e-01 | 91.6% | 35.0% |
| 2af7D00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.60 | 39.0 | 3.63e-01 | 90.5% | 51.2% |
| 1cpcB00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.60 | 52.0 | 4.27e-01 | 94.7% | 80.8% |
| 1qv9A02 | 6.10.140.120 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 44.0 | 4.37e-01 | 80.0% | 73.8% |
| 3t9oB00 | 1.20.120.30 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartate receptor, ligand-binding domain | 0.59 | 43.0 | 4.02e-01 | 77.9% | 60.8% |
| 2gmyD00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.59 | 38.0 | 3.29e-01 | 96.8% | 41.4% |
| 7wujE01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.59 | 47.0 | 3.48e-01 | 87.4% | 36.6% |
| 8ex5A02 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.59 | 51.0 | 3.96e-01 | 97.9% | 85.6% |
| 3frrA00 | 1.20.1260.60 | Mainly Alpha › Up-down Bundle › Ferritin › Vacuolar protein sorting-associated protein Ist1 | 0.59 | 47.0 | 3.85e-01 | 88.4% | 86.6% |
| 4ib4A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.58 | 46.0 | 3.32e-01 | 87.4% | 36.5% |
| 7sf7A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.57 | 45.0 | 3.35e-01 | 87.4% | 37.3% |
| 2qtqB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 48.0 | 3.84e-01 | 93.7% | 91.9% |
| 1f05A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 45.0 | 3.13e-01 | 84.2% | 95.3% |
| 3ggyA00 | 1.20.1260.60 | Mainly Alpha › Up-down Bundle › Ferritin › Vacuolar protein sorting-associated protein Ist1 | 0.57 | 48.0 | 3.93e-01 | 95.8% | 92.5% |
| 2kbbA00 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.57 | 46.0 | 3.82e-01 | 89.5% | 90.8% |
| 2zcxA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.56 | 45.0 | 3.49e-01 | 85.3% | 52.2% |
| 3k1zA02 | 1.10.150.720 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Haloacid dehalogenase-like hydrolase | 0.56 | 44.0 | 4.61e-01 | 92.6% | 95.2% |
| 3nrhA00 | 1.20.120.1550 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Protein of unknown function DUF5063 | 0.55 | 42.0 | 3.66e-01 | 87.4% | 50.6% |
| 2gfnA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 46.0 | 3.72e-01 | 92.6% | 50.0% |
| 4axsA00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.55 | 48.0 | 3.36e-01 | 94.7% | 55.7% |
| 6nmnA02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.54 | 43.0 | 3.98e-01 | 88.4% | 71.9% |
| 6z74C02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.54 | 45.0 | 3.89e-01 | 94.7% | 59.1% |
| 5d1rB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 47.0 | 3.64e-01 | 98.9% | 77.9% |
| 2gbbB00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.54 | 43.0 | 3.73e-01 | 88.4% | 83.9% |
| 4m70I00 | 1.20.5.4130 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.53 | 42.0 | 4.05e-01 | 83.2% | 94.4% |
| 5kd5A01 | 1.10.390.30 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Peptidase M60, enhancin-like domain 3 | 0.53 | 38.0 | 3.22e-01 | 97.9% | 40.8% |
| 2w53B00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 44.0 | 3.68e-01 | 93.7% | 54.9% |
| 3o10C00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.51 | 45.0 | 4.03e-01 | 98.9% | 86.8% |
| 8sbeA02 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.51 | 41.0 | 3.33e-01 | 88.4% | 58.8% |
ECOD (62)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4990796 | 604.39.1.9 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › Vut_1 | 0.83 | 75.0 | 5.76e-01 | 98.9% | 46.7% |
| 4947528 | 604.39.1.1 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › CbiM | 0.79 | 72.0 | 5.54e-01 | 100.0% | 97.1% |
| 4953068 | 604.39.1.9 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › Vut_1 | 0.77 | 71.0 | 5.46e-01 | 98.9% | 48.7% |
| 5006005 | 604.39.1.1 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › CbiM | 0.76 | 69.0 | 5.00e-01 | 100.0% | 73.5% |
| 3290536 | 604.39.1.0 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters | 0.76 | 68.0 | 5.29e-01 | 98.9% | 46.5% |
| 3288444 | 604.39.1.0 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters | 0.76 | 69.0 | 4.81e-01 | 100.0% | 68.4% |
| 4165485 | 604.39.1.20 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › TrpP | 0.75 | 68.0 | 5.49e-01 | 100.0% | 58.9% |
| 5016355 | 601.30.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Helical bundle domain in hypothetical protein PH1320 › Helical bundle domain in hypothetical protein PH1320 › NOG1_N | 0.75 | 66.0 | 5.81e-01 | 94.7% | 70.4% |
| 5042223 | 601.30.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Helical bundle domain in hypothetical protein PH1320 › Helical bundle domain in hypothetical protein PH1320 › NOG1_N | 0.75 | 65.0 | 5.64e-01 | 93.7% | 67.1% |
| 4480141 | 604.39.1.2 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › BioY | 0.74 | 67.0 | 5.26e-01 | 100.0% | 51.3% |
| 4931046 | 5058.1.1.2 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st | 0.74 | 53.0 | 5.76e-01 | 77.9% | 90.0% |
| 5024349 | 601.30.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Helical bundle domain in hypothetical protein PH1320 › Helical bundle domain in hypothetical protein PH1320 › NOG1_N | 0.72 | 63.0 | 5.27e-01 | 94.7% | 73.8% |
| 4027655 | 5069.1.3.23 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › DAD | 0.72 | 53.0 | 5.25e-01 | 77.9% | 79.0% |
| 4941415 | 1076.1.1.0 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related | 0.71 | 63.0 | 5.36e-01 | 95.8% | 94.0% |
| 3305432 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.70 | 63.0 | 4.88e-01 | 100.0% | 56.7% |
| 4931905 | 5079.1.1.1 ↗ | alpha duplicates or obligate multimers › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › MgtE | 0.70 | 61.0 | 4.78e-01 | 95.8% | 49.5% |
| 5002083 | 1076.1.1.4 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › PrsW-protease | 0.70 | 60.0 | 5.10e-01 | 93.7% | 100.0% |
| 4935314 | 3843.1.1.34 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › DUF373 | 0.70 | 58.0 | 4.92e-01 | 89.5% | 67.7% |
| 5018993 | 601.30.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Helical bundle domain in hypothetical protein PH1320 › Helical bundle domain in hypothetical protein PH1320 › NOG1_N | 0.70 | 60.0 | 5.43e-01 | 92.6% | 71.2% |
| 3691167 | 181.1.1.17 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › MHYT | 0.69 | 62.0 | 5.09e-01 | 98.9% | 67.6% |
| 4611749 | 604.39.1.5 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › ECF_trnsprt | 0.69 | 58.0 | 4.17e-01 | 92.6% | 62.5% |
| 3290731 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.69 | 56.0 | 5.86e-01 | 94.7% | 100.0% |
| 5055263 | 604.39.1.3 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › ECF-ribofla_trS | 0.69 | 61.0 | 4.94e-01 | 98.9% | 61.1% |
| 3961583 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.69 | 62.0 | 4.90e-01 | 100.0% | 78.5% |
| 3242824 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.68 | 59.0 | 4.15e-01 | 94.7% | 45.1% |
| 3979822 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.68 | 60.0 | 5.06e-01 | 100.0% | 58.1% |
| 5027859 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.67 | 58.0 | 5.15e-01 | 94.7% | 79.0% |
| 3620290 | 5048.1.1.1 ↗ | alpha complex topology › Aquaporin-like › Aquaporin-like › Aquaporin-like › MIP | 0.67 | 59.0 | 4.30e-01 | 100.0% | 71.2% |
| 1883344 | 604.39.1.4 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › ABC_cobalt | 0.67 | 59.0 | 4.72e-01 | 100.0% | 52.8% |
| 4420728 | 1075.5.1.2 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MurJ | 0.67 | 50.0 | 3.55e-01 | 78.9% | 53.1% |
| 3613320 | 605.3.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Nonstructural protein ns2, Nep, M1-binding domain › Nonstructural protein ns2, Nep, M1-binding domain | 0.66 | 49.0 | 5.08e-01 | 86.3% | 83.3% |
| 3638123 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.66 | 52.0 | 4.76e-01 | 86.3% | 64.0% |
| 5054069 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.66 | 49.0 | 4.32e-01 | 78.9% | 61.4% |
| 2877633 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.65 | 60.0 | 4.22e-01 | 100.0% | 53.4% |
| 3989529 | 1075.5.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter | 0.65 | 55.0 | 4.02e-01 | 89.5% | 63.7% |
| 3513623 | 106.1.1.1 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Globin | 0.65 | 57.0 | 4.81e-01 | 98.9% | 89.7% |
| 3589119 | 1075.5.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter | 0.65 | 52.0 | 3.84e-01 | 93.7% | 33.5% |
| 3633170 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.63 | 53.0 | 4.93e-01 | 95.8% | 72.5% |
| 3992940 | 5079.1.1.1 ↗ | alpha duplicates or obligate multimers › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › MgtE | 0.63 | 54.0 | 4.40e-01 | 97.9% | 60.0% |
| 5008061 | 1075.1.1.67 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › 12TM_1 | 0.63 | 54.0 | 4.40e-01 | 100.0% | 88.2% |
| 3289973 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.62 | 49.0 | 4.37e-01 | 85.3% | 63.0% |
| 4156566 | 5079.1.1.1 ↗ | alpha duplicates or obligate multimers › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › MgtE | 0.62 | 55.0 | 4.45e-01 | 100.0% | 62.2% |
| 4999247 | 873.1.1.11 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › PF27343 | 0.61 | 52.0 | 4.46e-01 | 92.6% | 94.0% |
| 3621548 | 5079.1.1.1 ↗ | alpha duplicates or obligate multimers › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › MgtE | 0.61 | 54.0 | 4.19e-01 | 100.0% | 52.6% |
| 3229309 | 1015.1.1.8 ↗ | alpha complex topology › Insulin-induced gene (Insig) homologs › Insulin-induced gene (Insig) homologs › Insulin-induced gene (Insig) homologs › DUF7802 | 0.61 | 53.0 | 3.72e-01 | 100.0% | 52.7% |
| 3353757 | 621.1.1.1 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › GBP_C | 0.60 | 48.0 | 4.84e-01 | 98.9% | 84.2% |
| 3617721 | 180.1.1.7 ↗ | alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › PAP2_C | 0.60 | 49.0 | 3.67e-01 | 89.5% | 53.1% |
| 5054557 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.60 | 49.0 | 5.09e-01 | 91.6% | 95.6% |
| 3232679 | 5079.1.1.1 ↗ | alpha duplicates or obligate multimers › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › MgtE | 0.60 | 52.0 | 4.09e-01 | 94.7% | 60.5% |
| 3919099 | 621.1.1.8 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › GVIN1 | 0.59 | 54.0 | 4.78e-01 | 98.9% | 84.4% |
| 4972025 | 1075.1.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain | 0.59 | 54.0 | 4.12e-01 | 97.9% | 60.0% |
| 5030388 | 129.1.1.5 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › Ferric_reduct | 0.59 | 51.0 | 4.08e-01 | 97.9% | 48.0% |
| 5075053 | 5073.1.1.5 ↗ | alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain M › Cation_ATPase_N | 0.59 | 50.0 | 3.36e-01 | 96.8% | 64.6% |
| 4033873 | 1075.1.1.10 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_5 | 0.58 | 50.0 | 4.02e-01 | 94.7% | 60.3% |
| None | — | 0.57 | 46.0 | 3.25e-01 | 87.4% | 37.4% | |
| 1266465 | 4033.1.1.1 ↗ | alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA_dh_N | 0.57 | 44.0 | 4.03e-01 | 82.1% | 95.2% |
| 3822 | 604.4.1.1 ↗ | alpha bundles › Spectrin repeat-like › Alpha-hemoglobin stabilizing protein AHSP › Alpha-hemoglobin stabilizing protein AHSP › AHSP | 0.57 | 47.0 | 4.83e-01 | 98.9% | 93.3% |
| 4534597 | 139.2.1.1 ↗ | few secondary structure elements › Multiheme cytochromes › Di-heme elbow motif › Di-heme elbow motif › Cytochrom_C552 | 0.56 | 46.0 | 2.91e-01 | 88.4% | 64.7% |
| 3546031 | 180.1.1.7 ↗ | alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › PAP2_C | 0.55 | 45.0 | 3.44e-01 | 93.7% | 50.2% |
| 4957442 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.55 | 48.0 | 4.14e-01 | 94.7% | 69.9% |
| 3694325 | 5051.1.1.9 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Transp_cyt_pur | 0.54 | 46.0 | 2.99e-01 | 95.8% | 54.7% |
| 4987361 | 601.2.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Cytochromes › Cytochromes | 0.53 | 42.0 | 3.92e-01 | 92.6% | 68.3% |