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IMGVR_UViG_3300029822_000952-3300029822-Ga0134854_100151013
Arc-VirIMGVR_UViG_3300029822_000952-3300029822-Ga0134854_100151013
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-99
Domain cluster:
rep: IMGVR_UViG_3300002219_000010-3300002219-SCADCLC_1000083292__D4-110
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3s9xA00 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.87 | 82.0 | 6.62e-01 | 100.0% | 71.1% |
| 1t62B00 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.84 | 78.0 | 6.26e-01 | 100.0% | 67.5% |
| 1s04A00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.78 | 71.0 | 6.63e-01 | 100.0% | 90.9% |
| 2dp9A01 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.77 | 66.0 | 6.42e-01 | 100.0% | 84.0% |
| 2kkuA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.74 | 67.0 | 5.77e-01 | 100.0% | 75.5% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 31.0 | 3.56e-01 | 82.2% | 62.1% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 29.0 | 3.30e-01 | 82.2% | 58.5% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 30.0 | 3.37e-01 | 81.1% | 60.9% |
| 2gksB01 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.58 | 52.0 | 4.49e-01 | 100.0% | 85.1% |
| 3h96C00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 48.0 | 4.29e-01 | 100.0% | 82.6% |
| 2lwyA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.56 | 43.0 | 3.82e-01 | 85.6% | 88.4% |
| 4kktA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.55 | 42.0 | 3.96e-01 | 97.8% | 68.6% |
| 1u0tA02 | 2.60.200.30 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › Probable inorganic polyphosphate/atp-NAD kinase; domain 2 | 0.54 | 31.0 | 2.71e-01 | 80.0% | 35.8% |
| 3db0B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 47.0 | 4.26e-01 | 98.9% | 90.3% |
| 2nlkA02 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.53 | 41.0 | 3.08e-01 | 87.8% | 60.4% |
| 5cgzA00 | 3.40.50.10320 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LmbE-like | 0.52 | 41.0 | 3.08e-01 | 85.6% | 90.8% |
| 5jv4A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 45.0 | 3.97e-01 | 100.0% | 90.8% |
| 7jrjK01 | 3.30.70.141 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleoside diphosphate kinase-like domain | 0.52 | 39.0 | 3.38e-01 | 91.1% | 48.1% |
| 5escA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 45.0 | 4.15e-01 | 98.9% | 88.2% |
| 1c0aA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.51 | 44.0 | 3.10e-01 | 100.0% | 66.7% |
| 2fmyA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 37.0 | 3.90e-01 | 93.3% | 85.4% |
| 4cvbA00 | 2.140.10.10 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Quinoprotein alcohol dehydrogenase-like superfamily | 0.50 | 37.0 | 2.33e-01 | 80.0% | 17.8% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995779 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.90 | 86.0 | 7.04e-01 | 100.0% | 93.2% |
| 4940646 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.89 | 78.0 | 7.82e-01 | 100.0% | 91.1% |
| 5070577 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.89 | 84.0 | 7.75e-01 | 100.0% | 89.1% |
| 5042221 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.89 | 83.0 | 7.87e-01 | 100.0% | 89.5% |
| 5077279 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.89 | 84.0 | 7.47e-01 | 100.0% | 77.5% |
| 4972117 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.88 | 83.0 | 7.44e-01 | 100.0% | 80.8% |
| 4972120 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.88 | 83.0 | 7.70e-01 | 100.0% | 85.5% |
| 144031 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.87 | 82.0 | 6.62e-01 | 100.0% | 71.1% |
| 4954540 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.87 | 81.0 | 7.55e-01 | 100.0% | 86.4% |
| 5022429 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.87 | 81.0 | 7.15e-01 | 100.0% | 76.0% |
| 4982523 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.86 | 80.0 | 7.31e-01 | 100.0% | 81.7% |
| 4019865 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.86 | 79.0 | 6.67e-01 | 100.0% | 72.4% |
| 5023996 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.85 | 80.0 | 7.36e-01 | 100.0% | 89.4% |
| 4958692 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.85 | 78.0 | 6.51e-01 | 100.0% | 75.3% |
| 4608277 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.85 | 79.0 | 6.87e-01 | 100.0% | 86.9% |
| 4998591 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.84 | 78.0 | 6.54e-01 | 100.0% | 80.0% |
| 5078127 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.83 | 71.0 | 7.31e-01 | 90.0% | 96.5% |
| 5006048 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.82 | 75.0 | 6.99e-01 | 100.0% | 80.9% |
| 4990496 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.80 | 74.0 | 6.79e-01 | 100.0% | 80.9% |
| 3603398 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.80 | 74.0 | 6.90e-01 | 100.0% | 95.4% |
| 177 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.80 | 74.0 | 6.12e-01 | 100.0% | 70.6% |
| 3279326 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.78 | 68.0 | 6.86e-01 | 100.0% | 94.4% |
| 3944719 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.78 | 71.0 | 6.12e-01 | 100.0% | 73.4% |
| 4953076 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.78 | 70.0 | 6.38e-01 | 100.0% | 85.8% |
| 3165125 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.78 | 71.0 | 6.71e-01 | 98.9% | 91.4% |
| 5024536 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.76 | 69.0 | 5.84e-01 | 100.0% | 71.0% |
| 2105336 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.76 | 70.0 | 5.85e-01 | 100.0% | 60.4% |
| 4229723 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.73 | 67.0 | 5.58e-01 | 100.0% | 60.0% |
| 5000162 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.66 | 57.0 | 5.51e-01 | 98.9% | 100.0% |
| 2138090 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.66 | 32.0 | 3.70e-01 | 82.2% | 63.1% |
| 4419948 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.65 | 31.0 | 3.61e-01 | 80.0% | 61.5% |
| 3278636 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.60 | 51.0 | 4.34e-01 | 96.7% | 80.6% |
| 3643549 | 4.1.1.139 ↗ | beta barrels › SH3 › SH3 › SH3 › IF5A-like_N | 0.59 | 30.0 | 3.22e-01 | 81.1% | 52.5% |
| 5045695 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 38.0 | 3.96e-01 | 94.4% | 71.8% |
| 5060198 | 101.1.2.894 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF2240 | 0.57 | 36.0 | 4.17e-01 | 91.1% | 95.0% |
| 3965002 | 2484.1.1.132 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo2 | 0.55 | 40.0 | 2.90e-01 | 76.7% | 100.0% |
| 3289825 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.54 | 47.0 | 4.55e-01 | 100.0% | 99.0% |
| 3802388 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.53 | 35.0 | 3.66e-01 | 97.8% | 73.5% |
| 3711682 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.52 | 46.0 | 3.13e-01 | 100.0% | 28.9% |
| 4008670 | 101.1.2.783 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30336 | 0.52 | 37.0 | 4.11e-01 | 93.3% | 97.1% |
| 3599865 | 304.34.1.0 ↗ | a+b two layers › Alpha-beta plaits › Nucleoside diphosphate kinases › Nucleoside diphosphate kinases | 0.51 | 40.0 | 3.18e-01 | 92.2% | 37.6% |
| 3179661 | 314.1.1.1 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2 | 0.51 | 44.0 | 2.94e-01 | 100.0% | 65.6% |
| 4963879 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.51 | 40.0 | 3.04e-01 | 87.8% | 68.1% |
| 4504560 | 2003.1.5.35 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM | 0.51 | 39.0 | 2.82e-01 | 87.8% | 52.9% |
| 3879415 | 219.1.1.4 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 | 0.50 | 43.0 | 3.06e-01 | 100.0% | 78.4% |
| 3287944 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.50 | 40.0 | 2.84e-01 | 87.8% | 37.3% |