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IMGVR_UViG_3300029822_000952-3300029822-Ga0134854_100151038
Arc-VirIMGVR_UViG_3300029822_000952-3300029822-Ga0134854_100151038
Identity
- Kingdom:
- archaea
Quality
70.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-46
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2k7iA01 | 3.30.160.160 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YegP-like | 0.67 | 44.0 | 4.27e-01 | 72.1% | 60.4% |
| 4me3A03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.65 | 55.0 | 5.18e-01 | 100.0% | 83.6% |
| 4pofA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.65 | 52.0 | 5.05e-01 | 100.0% | 82.0% |
| 1vw4X00 | 2.20.28.120 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › Ribosomal protein L33 | 0.63 | 53.0 | 4.75e-01 | 100.0% | 70.3% |
| 2htiA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.63 | 52.0 | 3.88e-01 | 100.0% | 39.7% |
| 7vqxR01 | 4.10.1240.10 | Few Secondary Structures › Irregular › Hormone receptor fold › GPCR, family 2, extracellular hormone receptor domain | 0.57 | 40.0 | 3.45e-01 | 81.4% | 50.0% |
| 3zc4F02 | 2.30.30.1260 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 40.0 | 3.59e-01 | 76.7% | 92.3% |
| 2k47A00 | 1.10.8.440 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Vesicular stomatitis virus phosphoprotein C-terminal domain | 0.57 | 46.0 | 4.04e-01 | 100.0% | 89.0% |
| 4irzA01 | 2.130.10.130 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal | 0.57 | 39.0 | 2.31e-01 | 76.7% | 10.9% |
| 4xtvB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 47.0 | 4.59e-01 | 100.0% | 89.6% |
| 1xf1A05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 39.0 | 3.21e-01 | 97.7% | 48.5% |
| 8fwpB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 36.0 | 2.32e-01 | 81.4% | 76.5% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5054307 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.76 | 61.0 | 6.08e-01 | 97.7% | 86.7% |
| 3278973 | 375.1.1.185 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_8 | 0.73 | 59.0 | 6.10e-01 | 100.0% | 97.5% |
| 4995774 | 375.1.1.185 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_8 | 0.73 | 59.0 | 6.06e-01 | 100.0% | 100.0% |
| 3939443 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.69 | 46.0 | 3.45e-01 | 72.1% | 27.3% |
| 3607898 | 375.1.1.58 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MCM_OB | 0.69 | 56.0 | 5.24e-01 | 100.0% | 74.5% |
| 4941241 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 54.0 | 5.18e-01 | 100.0% | 78.0% |
| 4991294 | 375.1.1.58 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MCM_OB | 0.68 | 56.0 | 5.43e-01 | 100.0% | 84.0% |
| 3507461 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 58.0 | 5.36e-01 | 100.0% | 76.4% |
| 4188237 | 4325.1.1.1 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 | 0.68 | 45.0 | 4.22e-01 | 74.4% | 54.5% |
| 3352699 | 375.1.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rubredoxin | 0.67 | 54.0 | 5.20e-01 | 95.3% | 80.0% |
| 3594960 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 54.0 | 5.19e-01 | 100.0% | 90.0% |
| 4222282 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 47.0 | 4.19e-01 | 97.7% | 55.4% |
| 3604685 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 53.0 | 4.84e-01 | 100.0% | 83.3% |
| 3060767 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 50.0 | 4.86e-01 | 100.0% | 84.0% |
| 3318055 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 46.0 | 4.70e-01 | 93.0% | 92.5% |
| 4978114 | 1001.1.1.0 ↗ | a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 | 0.60 | 46.0 | 4.31e-01 | 95.3% | 91.7% |
| 3971566 | 7056.1.1.0 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan | 0.59 | 46.0 | 4.62e-01 | 97.7% | 95.6% |
| 3785176 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.59 | 42.0 | 3.01e-01 | 81.4% | 40.9% |
| 3800816 | 221.14.1.0 ↗ | a+b two layers › beta-Grasp › TAR DNA-binding protein 43 N-terminal domain › TAR DNA-binding protein 43 N-terminal domain | 0.56 | 44.0 | 3.82e-01 | 97.7% | 95.0% |
| 3939093 | 4184.1.1.0 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat | 0.55 | 44.0 | 3.87e-01 | 100.0% | 64.0% |