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IMGVR_UViG_3300029823_000349-3300029823-Ga0134844_1055491
Arc-VirIMGVR_UViG_3300029823_000349-3300029823-Ga0134844_1055491
Identity
- Kingdom:
- archaea
Quality
85.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-94
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ffyA00 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.65 | 43.0 | 4.03e-01 | 72.3% | 56.2% |
| 3bzcA02 | 1.10.3500.10 | Mainly Alpha › Orthogonal Bundle › Tex N-terminal region-like › Tex N-terminal region-like | 0.63 | 44.0 | 3.24e-01 | 73.4% | 37.7% |
| 3psfA03 | 1.10.3500.10 | Mainly Alpha › Orthogonal Bundle › Tex N-terminal region-like › Tex N-terminal region-like | 0.57 | 40.0 | 2.84e-01 | 73.4% | 26.6% |
| 4s3nA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.56 | 36.0 | 3.11e-01 | 83.0% | 41.5% |
| 1bbnA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.56 | 38.0 | 3.46e-01 | 71.3% | 93.2% |
| 4zahA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 40.0 | 3.62e-01 | 78.7% | 100.0% |
| 2c81A02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 42.0 | 3.63e-01 | 87.2% | 100.0% |
| 2ogaA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 39.0 | 3.60e-01 | 80.9% | 100.0% |
| 4c5wA02 | 3.60.130.10 | Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like | 0.52 | 40.0 | 2.88e-01 | 84.0% | 79.1% |
| 4p4mA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.52 | 34.0 | 3.21e-01 | 78.7% | 55.7% |
| 4fvmA02 | 3.30.70.2820 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 33.0 | 3.20e-01 | 87.2% | 59.2% |
| 7qprA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.50 | 37.0 | 3.32e-01 | 77.7% | 85.9% |
| 1vwxf00 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.50 | 36.0 | 3.44e-01 | 74.5% | 91.7% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4032640 | 601.19.1.3 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › Phage_Mu_F | 0.73 | 58.0 | 4.02e-01 | 85.1% | 41.6% |
| 4112209 | 3681.1.1.0 ↗ | a+b complex topology › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit | 0.61 | 44.0 | 4.05e-01 | 81.9% | 58.3% |
| 4031329 | 4342.1.1.1 ↗ | alpha complex topology › Tex N-terminal region-like › Tex N-terminal region-like › Tex N-terminal region-like › Tex_central_region | 0.61 | 43.0 | 3.34e-01 | 73.4% | 42.9% |
| 3678063 | 304.28.1.10 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Helitron_like_N | 0.58 | 38.0 | 2.97e-01 | 93.6% | 31.2% |
| 3642465 | 304.55.1.15 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Helitron_like_N | 0.56 | 41.0 | 2.84e-01 | 75.5% | 81.8% |
| 3484483 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.56 | 37.0 | 3.66e-01 | 78.7% | 63.0% |
| 3682672 | 304.8.1.64 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Helitron_like_N, REP_ORF2-G2P | 0.56 | 40.0 | 2.89e-01 | 76.6% | 72.6% |
| 4486103 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.54 | 39.0 | 4.14e-01 | 76.6% | 100.0% |
| 4001618 | 633.23.1.14 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_3 | 0.54 | 34.0 | 2.67e-01 | 73.4% | 31.3% |
| 3992118 | 2484.3.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Creatinase/prolidase N-terminal domain › Creatinase/prolidase N-terminal domain › AMP_N | 0.54 | 42.0 | 3.48e-01 | 84.0% | 93.5% |
| 3839311 | 304.28.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › ACR_tran | 0.54 | 36.0 | 3.48e-01 | 88.3% | 59.1% |
| None | — | 0.53 | 38.0 | 2.81e-01 | 76.6% | 76.9% | |
| 5047756 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 36.0 | 2.99e-01 | 71.3% | 81.2% |
| 3636511 | 10.32.1.24 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PITH | 0.52 | 39.0 | 3.29e-01 | 81.9% | 82.8% |
| 3938245 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.52 | 38.0 | 2.84e-01 | 75.5% | 55.6% |
| 3437874 | 4004.1.1.1 ↗ | beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › YegS_C | 0.52 | 35.0 | 2.74e-01 | 70.2% | 93.2% |
| 3598360 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 39.0 | 3.26e-01 | 83.0% | 80.0% |
| 3595524 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 38.0 | 2.61e-01 | 78.7% | 39.4% |
| 4594388 | 5061.1.1.1 ↗ | alpha complex topology › Preprotein translocase SecY subunit › Preprotein translocase SecY subunit › Preprotein translocase SecY subunit › SecY | 0.50 | 44.0 | 2.87e-01 | 95.7% | 66.4% |