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IMGVR_UViG_3300029825_000003-3300029825-Ga0134835_1000258121
Arc-VirIMGVR_UViG_3300029825_000003-3300029825-Ga0134835_1000258121
Identity
- Kingdom:
- archaea
Quality
73.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 4-65
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dj7A00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.66 | 45.0 | 4.17e-01 | 71.0% | 83.7% |
| 2xgvA00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.57 | 48.0 | 3.88e-01 | 100.0% | 75.2% |
| 2x4lA02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.54 | 38.0 | 2.94e-01 | 75.8% | 88.6% |
| 4kfzA02 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.54 | 40.0 | 4.03e-01 | 98.4% | 78.5% |
| 1x6aA01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.53 | 40.0 | 4.07e-01 | 100.0% | 82.3% |
| 3n2oA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.53 | 38.0 | 2.45e-01 | 75.8% | 86.9% |
| 4jcjC02 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.53 | 39.0 | 4.03e-01 | 93.5% | 86.2% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3729353 | 101.1.1.334 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PheRS_DBD3, PheRS_DBD2 | 0.57 | 34.0 | 2.93e-01 | 72.6% | 36.2% |
| 3489858 | 377.9.1.9 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › MYND_ZMYND11_ZMYD8 | 0.56 | 35.0 | 3.79e-01 | 91.9% | 78.0% |
| 3786791 | 101.1.2.169 ↗ | alpha arrays › HTH › HTH › winged helix domain › PheRS_DBD3 | 0.54 | 35.0 | 3.05e-01 | 75.8% | 41.0% |
| 3613428 | 376.1.1.67 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3H2C3 | 0.52 | 39.0 | 3.42e-01 | 79.0% | 55.6% |
| 3848029 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.52 | 44.0 | 4.24e-01 | 98.4% | 82.9% |