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IMGVR_UViG_3300029825_000003-3300029825-Ga0134835_100025853
Arc-VirIMGVR_UViG_3300029825_000003-3300029825-Ga0134835_100025853
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-61
Domain cluster:
representative
D2
medium
residues 62-117
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4n1vA00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.62 | 47.0 | 3.99e-01 | 100.0% | 49.5% |
| 1nh2D02 | 2.30.18.10 | Mainly Beta › Roll › TATA box binding Protein, subunit D; domain 2 › Transcription factor IIA (TFIIA), beta-barrel domain | 0.58 | 38.0 | 4.06e-01 | 98.2% | 79.2% |
| 2ndpA00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.58 | 43.0 | 3.67e-01 | 100.0% | 47.5% |
| 1uunA02 | 2.10.300.10 | Mainly Beta › Ribbon › Porin MspA ribbon fold › Porin MspA ribbon domain | 0.56 | 40.0 | 4.12e-01 | 91.1% | 82.7% |
| 2zoeB01 | 2.170.15.20 | Mainly Beta › Beta Complex › Proaerolysin; Chain A, domain 3 › | 0.53 | 43.0 | 3.37e-01 | 96.4% | 46.4% |
| 2iieA01 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.50 | 39.0 | 3.17e-01 | 100.0% | 44.4% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4196289 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.63 | 44.0 | 2.82e-01 | 73.2% | 69.5% |
| 3727262 | 12.6.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Bac_rhamnosid_C | 0.60 | 35.0 | 3.13e-01 | 100.0% | 40.0% |
| 4931265 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 41.0 | 3.29e-01 | 76.8% | 77.5% |
| 222497 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.54 | 38.0 | 3.16e-01 | 92.9% | 41.8% |
| 5074169 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.53 | 40.0 | 3.35e-01 | 92.9% | 83.3% |
| 5023730 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.51 | 35.0 | 2.68e-01 | 75.0% | 62.8% |