←Back to structures
IMGVR_UViG_3300029825_000558-3300029825-Ga0134835_100134735
Arc-VirIMGVR_UViG_3300029825_000558-3300029825-Ga0134835_100134735
Identity
- Kingdom:
- archaea
Quality
76.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 26-74
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5fb0C01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.65 | 48.0 | 4.54e-01 | 100.0% | 65.6% |
| 3qikA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.64 | 43.0 | 3.69e-01 | 71.4% | 91.7% |
| 2gtiA01 | 3.30.160.820 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Nsp15 N-terminal domain-like | 0.61 | 42.0 | 3.89e-01 | 71.4% | 89.1% |
| 2riqA02 | 2.20.25.630 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.60 | 41.0 | 3.86e-01 | 71.4% | 63.3% |
| 3hk0B02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 42.0 | 3.06e-01 | 75.5% | 52.6% |
| 6fndA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 38.0 | 2.64e-01 | 71.4% | 22.0% |
| 1emoA00 | 2.10.25.10 | Mainly Beta › Ribbon › Laminin › Laminin | 0.55 | 36.0 | 3.14e-01 | 79.6% | 40.2% |
| 1sgoA01 | 3.30.2280.10 | Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) | 0.55 | 43.0 | 3.41e-01 | 85.7% | 46.3% |
| 2yrtA00 | 4.10.1130.20 | Few Secondary Structures › Irregular › btk motif of tyrosine-protein kinase itk › | 0.55 | 40.0 | 3.58e-01 | 81.6% | 72.0% |
| 3euwA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.54 | 37.0 | 2.48e-01 | 89.8% | 16.9% |
| 2j8gA03 | 2.20.120.10 | Mainly Beta › Single Sheet › Multimodular pneumococcal cell wall endolysin, domain 3 › Multimodular pneumococcal cell wall endolysin, domain 3 | 0.53 | 36.0 | 3.51e-01 | 71.4% | 70.7% |
| 1yx3A01 | 3.30.1420.10 | Alpha Beta › 2-Layer Sandwich › Dissimilatory Siroheme-sulfite Reductase; Chain: A; domain 1 › DsrC protein, N-terminal domain | 0.52 | 32.0 | 3.38e-01 | 79.6% | 68.3% |
| 2jneA00 | 2.10.290.10 | Mainly Beta › Ribbon › Rubredoxin-like › YfgJ-like | 0.52 | 35.0 | 3.26e-01 | 75.5% | 50.7% |
| 1b37A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 41.0 | 2.74e-01 | 93.9% | 44.0% |
| 2dx0B01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.51 | 38.0 | 3.42e-01 | 85.7% | 62.7% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995786 | 3153.1.1.0 ↗ | a+b two layers › PipX › PipX › PipX | 0.69 | 54.0 | 4.54e-01 | 87.8% | 54.1% |
| 3297615 | 376.1.3.25 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD-1st_NSD | 0.67 | 49.0 | 4.77e-01 | 100.0% | 70.9% |
| 3233401 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.66 | 45.0 | 3.90e-01 | 73.5% | 91.3% |
| 1255866 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.61 | 41.0 | 3.41e-01 | 71.4% | 80.9% |
| 5047657 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 45.0 | 4.47e-01 | 87.8% | 98.2% |
| 5003416 | 3487.1.1.0 ↗ | a+b three layers › Integron cassette protein VCH_CASS3 › Integron cassette protein VCH_CASS3 › Integron cassette protein VCH_CASS3 | 0.60 | 50.0 | 3.95e-01 | 100.0% | 93.9% |
| 4031064 | 4999.1.1.0 ↗ | beta barrels › YopX, C-terminal domain-like › YopX, C-terminal domain-like › YopX, C-terminal domain-like | 0.58 | 41.0 | 4.03e-01 | 77.6% | 69.1% |
| 3738913 | 377.1.1.28 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Pcf11_C | 0.56 | 44.0 | 4.05e-01 | 100.0% | 65.7% |
| 3936046 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.56 | 41.0 | 4.28e-01 | 89.8% | 100.0% |
| 5061081 | 375.1.1.83 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-TFIIB | 0.56 | 38.0 | 3.88e-01 | 98.0% | 74.0% |
| 5058552 | 375.1.1.83 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-TFIIB | 0.53 | 34.0 | 3.46e-01 | 71.4% | 66.0% |
| 5061079 | 4294.1.1.13 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Zn_ribbon_TFIIB | 0.52 | 34.0 | 3.47e-01 | 71.4% | 73.3% |
| 3712065 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 35.0 | 3.35e-01 | 75.5% | 72.3% |
| 3655173 | 375.13.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain | 0.51 | 38.0 | 3.81e-01 | 87.8% | 100.0% |
| 4989647 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.50 | 33.0 | 3.30e-01 | 71.4% | 60.0% |