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IMGVR_UViG_3300029825_000586-3300029825-Ga0134835_10045756
Arc-VirIMGVR_UViG_3300029825_000586-3300029825-Ga0134835_10045756
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-76
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dq3A03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.67 | 46.0 | 4.03e-01 | 71.7% | 72.4% |
| 1avaA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.65 | 46.0 | 4.75e-01 | 76.7% | 93.1% |
| 2joiA00 | 3.30.310.190 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.63 | 55.0 | 4.69e-01 | 100.0% | 60.4% |
| 1iv8A05 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.61 | 42.0 | 4.14e-01 | 73.3% | 100.0% |
| 4i86A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.61 | 43.0 | 3.71e-01 | 76.7% | 77.5% |
| 5f8zA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.60 | 47.0 | 3.90e-01 | 88.3% | 93.8% |
| 3devA02 | 3.10.310.30 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.59 | 40.0 | 3.33e-01 | 71.7% | 78.4% |
| 3aihB01 | 2.70.130.10 | Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain | 0.59 | 39.0 | 3.22e-01 | 75.0% | 38.3% |
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 39.0 | 3.75e-01 | 76.7% | 59.2% |
| 2p0wA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.58 | 50.0 | 3.96e-01 | 100.0% | 63.9% |
| 2zosB01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.58 | 40.0 | 2.99e-01 | 73.3% | 54.7% |
| 4qmfD02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.57 | 40.0 | 3.54e-01 | 96.7% | 48.9% |
| 3pqhA01 | 2.20.220.20 | Mainly Beta › Single Sheet › Glycosyl hydrolase fold › | 0.57 | 36.0 | 3.62e-01 | 78.3% | 61.7% |
| 4oevA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.56 | 46.0 | 3.59e-01 | 100.0% | 47.1% |
| 1hcdA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.56 | 35.0 | 2.83e-01 | 75.0% | 32.2% |
| 3witA00 | 2.20.220.20 | Mainly Beta › Single Sheet › Glycosyl hydrolase fold › | 0.55 | 35.0 | 3.47e-01 | 95.0% | 59.4% |
| 2m3xC02 | 2.40.10.360 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.55 | 35.0 | 3.36e-01 | 76.7% | 55.1% |
| 1mbmA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 44.0 | 4.14e-01 | 90.0% | 97.4% |
| 2xqyA01 | 3.30.500.50 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.54 | 44.0 | 3.31e-01 | 98.3% | 36.0% |
| 3bs1A00 | 2.40.50.1020 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain | 0.53 | 40.0 | 3.45e-01 | 86.7% | 83.5% |
| 1ixcA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 43.0 | 3.79e-01 | 100.0% | 95.0% |
| 1xhcA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.51 | 37.0 | 3.97e-01 | 96.7% | 97.9% |
| 3ezjA02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.51 | 36.0 | 3.53e-01 | 81.7% | 69.1% |
| 4g7nA01 | 3.30.1120.120 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.50 | 42.0 | 3.48e-01 | 100.0% | 76.0% |
| 1hdhA02 | 3.30.1120.10 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.50 | 41.0 | 3.90e-01 | 100.0% | 83.1% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3708219 | 331.23.1.4 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain › CPSF100_C | 0.70 | 52.0 | 5.01e-01 | 100.0% | 68.6% |
| 3602012 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.69 | 51.0 | 4.91e-01 | 100.0% | 68.6% |
| 3272987 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.66 | 47.0 | 3.15e-01 | 76.7% | 25.5% |
| 3549481 | 247.1.1.38 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C | 0.65 | 53.0 | 4.83e-01 | 100.0% | 68.8% |
| 3747736 | 331.23.1.7 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain › CPSF73-100_C | 0.64 | 52.0 | 4.81e-01 | 100.0% | 68.8% |
| 4974879 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.63 | 52.0 | 3.93e-01 | 96.7% | 83.6% |
| 5012777 | 205.1.1.16 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 | 0.60 | 41.0 | 3.71e-01 | 73.3% | 100.0% |
| 3212531 | 4.1.1.342 ↗ | beta barrels › SH3 › SH3 › SH3 › TRA-1_regulated | 0.56 | 41.0 | 3.42e-01 | 76.7% | 80.0% |
| 3974099 | 7523.1.1.15 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate | 0.56 | 46.0 | 3.90e-01 | 100.0% | 79.1% |
| 3512615 | 633.23.1.4 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_2 | 0.55 | 46.0 | 2.99e-01 | 93.3% | 77.8% |
| 3518432 | 220.1.1.79 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › TBC1D23_C | 0.55 | 40.0 | 3.21e-01 | 76.7% | 40.9% |
| 3579711 | 63.1.1.3 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › PRKCSH | 0.53 | 38.0 | 2.52e-01 | 80.0% | 18.4% |
| 3387010 | 1.1.17.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF7488 | 0.53 | 44.0 | 3.42e-01 | 98.3% | 87.6% |
| 4991400 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.52 | 45.0 | 3.16e-01 | 96.7% | 73.2% |
| 3421657 | 5.1.10.3 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › DUF295 | 0.52 | 36.0 | 3.30e-01 | 76.7% | 52.9% |
| 4591467 | 885.1.1.1 ↗ | a+b complex topology › Transcription factor NusA, N-terminal domain › Transcription factor NusA, N-terminal domain › Transcription factor NusA, N-terminal domain › NusA_N | 0.51 | 36.0 | 2.96e-01 | 75.0% | 57.6% |
| 3724349 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.51 | 36.0 | 2.86e-01 | 76.7% | 82.9% |
| 5056948 | 2004.1.1.100 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NTPase_1 | 0.50 | 41.0 | 3.13e-01 | 100.0% | 61.8% |
| 4954266 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.50 | 36.0 | 2.76e-01 | 76.7% | 73.1% |
| 3831652 | 71.1.1.17 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF28435 | 0.50 | 38.0 | 2.86e-01 | 83.3% | 88.0% |