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IMGVR_UViG_3300029825_000680-3300029825-Ga0134835_100715914

Arc-Vir

IMGVR_UViG_3300029825_000680-3300029825-Ga0134835_100715914

Quality

88.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-85
PDB
Domain cluster: representative
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4z32A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.72 50.0 4.83e-01 72.6% 65.6%
1h4rA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.72 49.0 4.82e-01 71.4% 75.8%
3qijB03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.71 50.0 4.93e-01 72.6% 75.3%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.70 49.0 4.53e-01 72.6% 63.9%
4nswA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 48.0 4.43e-01 73.8% 66.1%
1kz7C02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 46.0 3.99e-01 72.6% 62.0%
4omfB02 3.10.450.750 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 32.0 4.08e-01 98.8% 80.9%
1q67A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 45.0 3.79e-01 70.2% 62.9%
5j3tA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 45.0 3.94e-01 72.6% 49.2%
2vouB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 49.0 3.57e-01 83.3% 89.6%
1mixA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 43.0 4.18e-01 70.2% 67.7%
5xbfA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 43.0 4.32e-01 72.6% 72.7%
2lydA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 42.0 3.69e-01 71.4% 50.0%
2gdqA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.61 49.0 4.56e-01 88.1% 89.7%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 42.0 4.16e-01 71.4% 74.7%
1bqgA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.60 53.0 4.53e-01 100.0% 70.3%
2m3xC02 2.40.10.360 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.59 37.0 3.98e-01 85.7% 75.4%
2cduA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 40.0 3.30e-01 71.4% 59.6%
2xdoD00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 50.0 3.28e-01 96.4% 95.9%
6qm7K00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.58 49.0 3.65e-01 92.9% 47.1%
3d1cA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 40.0 3.57e-01 71.4% 75.4%
3o0hB02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 39.0 3.52e-01 71.4% 74.4%
3i6dA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 50.0 4.10e-01 96.4% 95.5%
1vlaA01 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.57 27.0 3.60e-01 84.5% 88.1%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 32.0 3.72e-01 82.1% 79.3%
2q0lA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 49.0 3.82e-01 97.6% 96.3%
3rp7A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 48.0 3.89e-01 96.4% 96.4%
1gv4A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 39.0 3.09e-01 73.8% 54.8%
4bjzA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 48.0 3.88e-01 98.8% 79.2%
5ttjA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 48.0 3.56e-01 97.6% 95.9%
3awiA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 45.0 3.22e-01 90.5% 83.8%
3tw8A01 3.30.450.200 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin module 0.55 44.0 3.83e-01 91.7% 84.1%
2l73A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.54 44.0 3.70e-01 88.1% 84.6%
3zm6A02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.54 38.0 2.87e-01 75.0% 31.4%
4iv9A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 47.0 3.38e-01 97.6% 78.2%
6g6qA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 40.0 3.37e-01 79.8% 49.3%
2ymsC00 2.40.10.480 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.53 39.0 4.14e-01 78.6% 88.0%
4dapA01 2.40.50.580 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 38.0 3.95e-01 77.4% 98.8%
4a9wA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 46.0 3.13e-01 98.8% 97.3%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.52 37.0 4.07e-01 84.5% 93.9%
1d8cA02 2.170.170.11 Mainly Beta › Beta Complex › Malate synthase G - maily-beta sub-domain › Malate synthase G - maily-beta sub-domain 0.52 41.0 3.61e-01 85.7% 74.2%
3pnnA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.52 45.0 3.15e-01 98.8% 55.8%
4k22B01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 46.0 3.33e-01 100.0% 82.4%
1aisA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.50 35.0 3.51e-01 72.6% 73.6%
3e82E02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.50 44.0 3.40e-01 100.0% 71.5%
3vn5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.50 27.0 2.90e-01 96.4% 58.0%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3939076 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.76 54.0 5.10e-01 73.8% 69.0%
4947834 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.75 51.0 4.78e-01 71.4% 68.6%
4023242 220.1.1.187 beta barrels › PH domain-like › PH domain-like › PH domain-like › VPS13_C 0.74 52.0 4.50e-01 72.6% 55.2%
3630302 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.73 51.0 4.65e-01 72.6% 66.4%
3870514 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.71 50.0 4.54e-01 73.8% 62.6%
3507234 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.71 50.0 4.62e-01 73.8% 65.5%
3991186 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.71 50.0 4.53e-01 73.8% 63.5%
4004179 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.71 49.0 3.59e-01 72.6% 30.4%
3480535 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 49.0 4.56e-01 73.8% 68.6%
3254760 220.1.1.29 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_3 0.69 48.0 4.23e-01 72.6% 55.2%
3256843 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.69 49.0 4.53e-01 73.8% 67.6%
3407758 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.68 48.0 4.29e-01 72.6% 57.4%
4957336 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 48.0 3.11e-01 75.0% 50.9%
5081361 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 47.0 4.47e-01 72.6% 64.0%
5047735 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 48.0 4.00e-01 75.0% 79.9%
3473585 220.1.1.66 beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.67 46.0 3.93e-01 71.4% 60.0%
4545531 220.1.1.255 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_10 0.67 45.0 4.66e-01 70.2% 75.0%
4978405 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 47.0 4.04e-01 73.8% 58.2%
3219161 220.1.1.50 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_17 0.66 46.0 4.26e-01 72.6% 71.8%
3399725 220.1.1.50 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_17 0.65 45.0 4.13e-01 72.6% 70.4%
5034371 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.65 49.0 3.18e-01 82.1% 84.2%
4067945 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.62 51.0 4.75e-01 90.5% 85.7%
3503630 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 43.0 3.97e-01 73.8% 92.2%
5752 230.1.1.3 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS 0.62 43.0 3.51e-01 73.8% 86.5%
3655242 220.1.1.13 beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 0.61 42.0 3.46e-01 72.6% 55.6%
5075769 56.2.1.1 beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT 0.60 42.0 4.63e-01 98.8% 95.4%
3175878 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 50.0 4.08e-01 91.7% 57.4%
4548716 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.60 52.0 4.93e-01 98.8% 90.0%
4970510 56.2.1.1 beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT 0.59 41.0 4.59e-01 97.6% 95.4%
4554841 6020.1.1.1 a+b two layers › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › FtsQ_DivIB_C 0.59 42.0 3.49e-01 73.8% 69.0%
4986651 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.58 39.0 4.12e-01 83.3% 76.0%
4357143 2003.1.3.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.58 49.0 3.15e-01 90.5% 92.3%
4987919 56.2.1.1 beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT 0.58 38.0 4.44e-01 95.2% 100.0%
5077594 56.2.1.1 beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT 0.57 37.0 4.34e-01 82.1% 100.0%
4157284 9.7.1.1 beta barrels › Lipocalins/Streptavidin › Metalloprotease inhibitor › Metalloprotease inhibitor › Inh 0.57 36.0 3.35e-01 86.9% 50.5%
5016260 56.2.1.1 beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT 0.57 37.0 4.28e-01 97.6% 93.2%
5001380 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 39.0 4.02e-01 83.3% 75.0%
4982571 56.2.1.1 beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT 0.57 38.0 4.37e-01 97.6% 100.0%
4083184 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.56 48.0 4.64e-01 100.0% 85.0%
3692391 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.56 49.0 3.15e-01 97.6% 78.6%
3440727 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 42.0 2.42e-01 79.8% 11.5%
4306159 2011.2.1.3 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › Pept_tRNA_hydro 0.56 47.0 3.65e-01 94.0% 100.0%
4944138 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 45.0 4.19e-01 89.3% 93.3%
3514491 5.1.4.242 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N 0.55 41.0 2.68e-01 79.8% 20.3%
4980465 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 38.0 3.77e-01 71.4% 74.4%
5058747 56.2.1.1 beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT 0.55 37.0 4.25e-01 94.0% 100.0%
3314585 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.55 40.0 2.93e-01 79.8% 30.2%
5033675 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.54 48.0 3.10e-01 97.6% 77.1%
4018320 5.1.8.3 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 › WD40 0.54 42.0 3.29e-01 85.7% 56.3%
3961503 2003.1.2.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 0.54 38.0 3.08e-01 73.8% 79.4%
3193273 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 40.0 2.45e-01 79.8% 12.7%
3726123 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.54 47.0 2.98e-01 97.6% 79.1%
4792845 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.53 37.0 2.80e-01 72.6% 70.6%
3425564 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.53 44.0 2.75e-01 92.9% 29.1%
3338678 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.53 46.0 2.97e-01 97.6% 76.7%
4468946 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.53 45.0 3.46e-01 94.0% 59.0%
4949985 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 36.0 3.68e-01 70.2% 76.2%
None 0.53 47.0 3.24e-01 98.8% 76.6%
4593126 2003.1.2.16 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.53 46.0 3.03e-01 97.6% 83.9%
4387924 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.53 37.0 2.92e-01 72.6% 91.4%
3263649 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 36.0 3.28e-01 73.8% 56.9%
3468141 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.53 44.0 3.49e-01 94.0% 64.9%
4031001 2003.1.3.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_3 0.52 46.0 3.00e-01 96.4% 91.4%
4021151 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.52 44.0 3.24e-01 95.2% 47.7%
3507975 145.1.1.0 alpha arrays › F-box domain › F-box domain › F-box domain 0.52 39.0 2.67e-01 81.0% 23.5%
2073980 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.52 36.0 2.91e-01 73.8% 85.6%
3426781 2003.1.2.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.51 37.0 2.90e-01 77.4% 41.1%
3648305 809.2.1.7 a+b two layers › BLIP-like › BT0923-like › BT0923-like › Beta-prop_IP5PC_F 0.50 36.0 3.52e-01 76.2% 68.4%