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IMGVR_UViG_3300029825_000739-3300029825-Ga0134835_100816710

Arc-Vir

IMGVR_UViG_3300029825_000739-3300029825-Ga0134835_100816710

Quality

86.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-97
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ag6A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.86 81.0 5.81e-01 100.0% 39.3%
4kfuA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 65.0 5.07e-01 99.0% 42.9%
2hcuA00 3.20.19.10 Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 0.60 41.0 3.39e-01 71.1% 88.7%
3hpaA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.55 49.0 3.49e-01 100.0% 46.3%
3h79A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.54 41.0 3.95e-01 83.5% 89.6%
2b5eA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 42.0 3.94e-01 84.5% 81.5%
3ed3A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 41.0 3.81e-01 83.5% 83.5%
4avaA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 41.0 3.42e-01 86.6% 79.8%
4uuwA01 3.40.980.10 Alpha Beta › 3-Layer(aba) Sandwich › Molybdenum Cofactor Biosythetic Enzyme; Chain A › MoaB/Mog-like domain 0.50 41.0 3.52e-01 94.8% 91.9%
ECOD (43)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5057476 2004.1.1.221 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-loop_TraG 0.90 82.0 5.27e-01 100.0% 23.8%
5056660 2004.1.1.221 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-loop_TraG 0.89 80.0 5.18e-01 100.0% 24.5%
4940729 2004.1.1.221 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-loop_TraG 0.88 79.0 5.02e-01 100.0% 22.2%
5072852 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.88 75.0 4.79e-01 100.0% 22.0%
151086 2004.1.1.221 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-loop_TraG 0.86 80.0 5.19e-01 100.0% 25.7%
4928296 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.85 76.0 4.82e-01 100.0% 22.0%
4934558 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.85 80.0 5.05e-01 100.0% 24.3%
4927615 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.83 78.0 5.20e-01 100.0% 29.3%
3589073 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.83 77.0 4.87e-01 100.0% 23.7%
5076679 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.83 75.0 4.77e-01 100.0% 22.7%
5042552 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.83 73.0 4.78e-01 100.0% 24.9%
4976072 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.83 70.0 4.68e-01 100.0% 25.1%
4964433 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.82 72.0 4.67e-01 100.0% 23.4%
5044474 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.82 69.0 4.56e-01 100.0% 23.2%
4974838 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.82 71.0 5.18e-01 100.0% 37.1%
5012012 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.82 71.0 4.60e-01 100.0% 23.4%
5011452 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.82 71.0 4.77e-01 99.0% 26.9%
4943370 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.81 70.0 4.49e-01 100.0% 21.4%
4999100 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.81 69.0 4.44e-01 100.0% 21.7%
5073280 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.81 69.0 4.46e-01 100.0% 21.4%
4979441 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.80 69.0 4.51e-01 100.0% 23.7%
5052076 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.80 68.0 4.41e-01 100.0% 22.0%
4982833 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.80 70.0 4.66e-01 100.0% 25.6%
5001587 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.80 69.0 4.49e-01 100.0% 22.8%
5036150 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.80 71.0 4.66e-01 100.0% 25.2%
4970544 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.80 67.0 4.38e-01 100.0% 22.0%
4940186 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.79 72.0 4.71e-01 96.9% 25.1%
4970970 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.79 71.0 4.95e-01 100.0% 32.1%
5073577 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.79 72.0 4.61e-01 100.0% 23.2%
5079723 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.79 70.0 4.55e-01 100.0% 23.6%
5001473 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.79 69.0 4.74e-01 100.0% 29.8%
5011663 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.78 74.0 4.92e-01 100.0% 29.4%
5005238 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.78 72.0 4.56e-01 100.0% 22.6%
4991188 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.78 68.0 4.55e-01 95.9% 26.9%
5073877 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.77 68.0 4.39e-01 100.0% 22.4%
5071671 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.77 71.0 4.73e-01 100.0% 27.6%
5057187 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.76 68.0 4.48e-01 100.0% 24.8%
5045625 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.75 70.0 4.47e-01 100.0% 23.1%
4944701 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 66.0 4.44e-01 100.0% 37.7%
3888744 3570.1.1.0 a+b two layers › FAM3 superfamily › FAM3 superfamily › FAM3 superfamily 0.58 41.0 3.96e-01 76.3% 91.3%
4775272 109.21.1.0 alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain 0.55 26.0 3.35e-01 73.2% 87.0%
3968749 2007.13.1.1 a/b three-layered sandwiches › Flavodoxin-like › Rossmann-like domains in magnesium chelatase catalytic subunit › Rossmann-like domains in magnesium chelatase catalytic subunit › CobN-Mg_chel 0.51 43.0 3.20e-01 94.8% 40.0%
4150182 7541.1.1.1 a/b three-layered sandwiches › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › MoCF_biosynth 0.50 41.0 3.50e-01 94.8% 90.0%
D2 medium residues 119-186
PDB
Domain cluster: representative
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2dqlA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 48.0 4.03e-01 82.4% 62.6%
1feuA01 2.40.240.10 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P 0.61 42.0 3.86e-01 72.1% 59.3%
2kpmA01 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.60 44.0 4.33e-01 79.4% 96.0%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 45.0 3.90e-01 80.9% 67.9%
4petA01 3.40.190.170 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 0.59 45.0 3.26e-01 85.3% 47.9%
2qy6A01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 42.0 2.94e-01 76.5% 76.6%
1ef0B02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.59 43.0 3.19e-01 79.4% 31.4%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 44.0 3.94e-01 80.9% 71.9%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 44.0 3.82e-01 82.4% 66.7%
2gukA00 3.30.2190.10 Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like 0.56 46.0 4.07e-01 98.5% 91.9%
2ek0A00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.56 41.0 3.80e-01 79.4% 82.2%
3r6fA00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.56 43.0 3.61e-01 88.2% 70.0%
6kf9G01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 3.97e-01 82.4% 84.1%
7n0eB02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.55 40.0 3.32e-01 76.5% 95.1%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 41.0 3.62e-01 80.9% 66.0%
5idmA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.55 40.0 3.02e-01 77.9% 87.0%
1bm9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 41.0 3.49e-01 82.4% 65.0%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 40.0 3.75e-01 80.9% 79.8%
3ef0A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.54 41.0 2.98e-01 83.8% 59.1%
3bxoA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 39.0 2.97e-01 76.5% 76.3%
2cpmA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.54 43.0 3.95e-01 89.7% 70.2%
1dq3A04 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.54 47.0 3.96e-01 97.1% 84.2%
4ozjA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 39.0 3.45e-01 79.4% 78.8%
4dzrA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 37.0 2.92e-01 75.0% 78.5%
3evzA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 38.0 2.96e-01 77.9% 86.7%
7qh2C03 3.30.70.2740 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 31.0 3.04e-01 89.7% 52.6%
7qssA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.52 42.0 3.20e-01 94.1% 85.6%
3zxoA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.52 37.0 3.17e-01 77.9% 93.6%
1ug8A00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.52 40.0 3.75e-01 85.3% 77.0%
4gaaA01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.52 37.0 2.75e-01 79.4% 26.9%
1tigA00 3.30.110.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain 0.52 39.0 3.64e-01 82.4% 80.7%
4ofdB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 36.0 3.30e-01 75.0% 65.3%
5w2fA01 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.50 40.0 3.78e-01 91.2% 70.9%
1l1qA00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.50 41.0 3.08e-01 92.6% 49.7%
4nehA04 2.60.40.1510 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 0.50 38.0 2.98e-01 82.4% 66.9%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4232299 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.64 44.0 3.97e-01 72.1% 61.1%
5022036 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 46.0 3.69e-01 76.5% 77.0%
1839917 101.1.2.171 alpha arrays › HTH › HTH › winged helix domain › HTH_52 0.64 44.0 4.45e-01 72.1% 91.0%
164542 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 48.0 4.03e-01 82.4% 62.6%
5003874 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.62 46.0 3.89e-01 80.9% 64.2%
4959599 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 47.0 3.94e-01 80.9% 65.8%
3497072 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.61 47.0 4.00e-01 82.4% 64.5%
4957195 101.1.2.892 alpha arrays › HTH › HTH › winged helix domain › ArsR 0.61 46.0 4.01e-01 80.9% 58.1%
5041543 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.61 45.0 3.62e-01 80.9% 46.4%
4529613 2003.1.5.49 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_30 0.61 44.0 2.95e-01 77.9% 75.4%
5056915 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.60 51.0 3.97e-01 98.5% 48.5%
3743748 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 46.0 4.21e-01 82.4% 65.6%
3410614 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.60 49.0 4.31e-01 91.2% 61.9%
4999154 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.60 45.0 4.25e-01 82.4% 76.5%
5025618 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 45.0 3.90e-01 82.4% 60.0%
5069274 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.60 45.0 3.85e-01 82.4% 57.4%
4974447 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 44.0 3.72e-01 80.9% 54.2%
4015688 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 45.0 4.13e-01 82.4% 80.0%
4388828 2003.1.5.49 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_30 0.59 44.0 3.02e-01 79.4% 72.2%
4138496 2003.1.5.49 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_30 0.59 43.0 2.99e-01 77.9% 73.2%
4438513 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.59 45.0 3.85e-01 82.4% 60.9%
4947441 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 45.0 4.19e-01 82.4% 76.5%
5029277 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.59 43.0 3.78e-01 79.4% 61.9%
5031648 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.59 44.0 3.36e-01 80.9% 39.4%
4947948 101.1.2.876 alpha arrays › HTH › HTH › winged helix domain › tRNA-synt_2d 0.59 44.0 4.12e-01 80.9% 77.6%
5033035 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 44.0 3.68e-01 80.9% 55.1%
3967945 2003.1.5.106 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DUF6231 0.58 43.0 3.32e-01 77.9% 73.5%
5007985 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.58 42.0 3.37e-01 79.4% 96.5%
4045219 2003.1.5.49 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_30 0.58 42.0 2.86e-01 77.9% 69.3%
4478999 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.58 43.0 3.28e-01 82.4% 38.2%
3977348 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.58 42.0 3.40e-01 79.4% 96.4%
4930596 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.57 43.0 3.24e-01 80.9% 37.6%
4344487 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.57 42.0 3.22e-01 79.4% 37.6%
5042462 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.57 43.0 3.31e-01 82.4% 39.4%
4937831 2003.1.5.42 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_21 0.57 42.0 2.80e-01 76.5% 65.0%
4950547 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.57 42.0 3.82e-01 80.9% 67.4%
4507638 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.56 41.0 3.18e-01 79.4% 37.6%
5620 320.3.1.1 a+b two layers › R3H domain-like › PG1857-like › PG1857-like › DUF2023 0.56 46.0 4.07e-01 98.5% 91.9%
5054122 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.56 41.0 3.22e-01 80.9% 40.0%
3958859 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 42.0 4.04e-01 82.4% 83.7%
3306699 101.1.2.517 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD 0.56 46.0 2.90e-01 92.6% 27.1%
4981949 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 42.0 4.01e-01 80.9% 83.7%
5050784 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 42.0 3.86e-01 82.4% 78.9%
5011468 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.55 42.0 3.47e-01 82.4% 52.8%
3921829 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 40.0 4.15e-01 79.4% 83.1%
3811780 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.54 41.0 3.49e-01 82.4% 54.8%
3576019 246.3.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos 0.54 48.0 2.96e-01 100.0% 23.7%
3396645 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.54 43.0 3.90e-01 91.2% 68.0%
4545670 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.53 45.0 4.04e-01 95.6% 81.8%
5055444 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.53 39.0 3.52e-01 80.9% 63.0%
3515356 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 46.0 4.48e-01 95.6% 96.0%
3400190 101.1.2.24 alpha arrays › HTH › HTH › winged helix domain › MAGE 0.53 47.0 3.83e-01 100.0% 85.4%
3494851 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 40.0 3.66e-01 82.4% 96.7%
3549847 101.1.2.394 alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.52 45.0 2.86e-01 98.5% 39.7%
3789262 246.3.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos 0.52 44.0 2.80e-01 100.0% 40.8%
3175131 246.3.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos 0.52 44.0 2.83e-01 98.5% 98.7%
3480923 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.51 36.0 3.14e-01 76.5% 84.3%
5010188 328.5.1.0 a+b two layers › IF3-like › SirA-like › SirA-like 0.51 37.0 3.74e-01 79.4% 80.0%
4373221 2003.1.5.49 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_30 0.51 41.0 2.87e-01 95.6% 78.5%
3991339 246.3.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos 0.50 42.0 2.75e-01 100.0% 44.8%
3507800 246.3.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos 0.50 42.0 2.76e-01 100.0% 77.4%
D3 medium residues 187-295
PDB
Domain cluster: representative
CATH (76)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1xmxA02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.79 69.0 6.20e-01 93.6% 86.6%
2ewfA03 3.40.91.50 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.78 71.0 5.53e-01 98.2% 68.9%
3ajvC02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.75 55.0 5.94e-01 95.4% 90.1%
2eo0B00 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.72 63.0 6.04e-01 94.5% 95.2%
2zyzC00 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.72 51.0 5.39e-01 91.7% 83.3%
4cn8A02 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.71 64.0 5.27e-01 99.1% 90.6%
4qbnA00 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.70 56.0 6.01e-01 98.2% 100.0%
3odhA00 3.40.91.20 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.69 57.0 4.72e-01 89.0% 62.9%
3kcnB00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.68 60.0 5.58e-01 96.3% 81.0%
1aoxA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.68 61.0 4.98e-01 99.1% 91.5%
4qboA00 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.68 53.0 5.65e-01 97.2% 96.7%
4f1jA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.68 60.0 4.96e-01 99.1% 92.5%
1ob8A00 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.68 60.0 5.84e-01 95.4% 99.2%
4b3xA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 61.0 5.23e-01 99.1% 89.0%
1mkyA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 61.0 5.40e-01 99.1% 91.7%
2n9uA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.68 60.0 5.72e-01 97.2% 84.5%
3cu5B00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.67 59.0 5.62e-01 96.3% 88.4%
5dn8A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 60.0 5.29e-01 100.0% 93.3%
1n0uA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 60.0 4.86e-01 100.0% 88.1%
4h2dA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.66 60.0 5.28e-01 100.0% 91.8%
2f02B00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.66 59.0 4.26e-01 100.0% 83.4%
2f62A00 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.65 59.0 5.20e-01 100.0% 88.6%
3ia7A01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.65 59.0 4.61e-01 100.0% 96.1%
2l82A00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.65 56.0 4.96e-01 96.3% 88.9%
6bmaA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.64 52.0 3.92e-01 86.2% 71.4%
1ur3M00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.64 51.0 3.74e-01 85.3% 81.5%
2vliB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 55.0 4.78e-01 96.3% 90.8%
6lpmA00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.64 57.0 4.40e-01 100.0% 77.1%
6p66D01 3.40.91.30 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.63 55.0 5.60e-01 99.1% 99.1%
2p6pB01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.63 57.0 4.60e-01 100.0% 94.3%
1lluA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 45.0 4.14e-01 74.3% 58.0%
1jmvA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.63 44.0 4.10e-01 73.4% 93.6%
2lciA00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.62 54.0 5.11e-01 97.2% 89.6%
4g2tA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.62 57.0 4.60e-01 100.0% 95.1%
1k4yA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.62 56.0 3.64e-01 100.0% 76.4%
4fb7A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.62 55.0 4.15e-01 97.2% 96.2%
3c3jA01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.62 54.0 4.54e-01 97.2% 66.5%
3bleA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.62 50.0 3.64e-01 86.2% 71.0%
1vcvA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.62 49.0 3.91e-01 86.2% 92.9%
4eyeA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.62 43.0 3.85e-01 73.4% 50.6%
3b5vA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.62 54.0 4.18e-01 97.2% 92.7%
7oh2A01 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.61 52.0 3.75e-01 94.5% 97.3%
1t9hA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 46.0 4.16e-01 78.9% 67.1%
6cblD01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.61 52.0 4.19e-01 93.6% 58.1%
6ofuA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.61 48.0 3.73e-01 86.2% 91.9%
3iupA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 43.0 3.62e-01 73.4% 44.1%
7lldA01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.61 53.0 4.13e-01 95.4% 54.6%
3gwqA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.61 49.0 3.83e-01 86.2% 76.0%
1qyiA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.61 56.0 4.66e-01 100.0% 94.5%
2wnsA00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.61 49.0 4.07e-01 88.1% 69.5%
1pz1A00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.61 48.0 3.46e-01 86.2% 78.3%
4xk2B00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.60 50.0 3.64e-01 89.9% 67.6%
3afoB01 3.40.50.10330 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1 0.60 55.0 4.43e-01 100.0% 58.8%
3n4fA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.60 46.0 3.54e-01 83.5% 50.2%
1vkpB00 3.75.10.10 Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A 0.59 46.0 3.18e-01 81.7% 97.8%
6xzqA01 3.40.91.90 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain 0.59 51.0 4.50e-01 94.5% 75.9%
5c54G00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.59 45.0 3.33e-01 81.7% 67.1%
4l9yD00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.59 48.0 3.66e-01 89.0% 90.6%
3e8sA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 50.0 3.99e-01 95.4% 96.8%
1pyfA00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.58 47.0 3.47e-01 90.8% 80.7%
2b7nA02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.58 44.0 4.03e-01 81.7% 91.8%
1tdjA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 40.0 4.31e-01 71.6% 94.6%
2iyaA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.57 50.0 3.99e-01 100.0% 94.3%
5b1hA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 41.0 4.27e-01 75.2% 90.2%
4s2rP02 3.40.350.10 Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain 0.57 48.0 4.20e-01 89.9% 82.3%
5y58B01 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.57 49.0 4.23e-01 97.2% 95.5%
2i7xA01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.56 41.0 3.17e-01 79.8% 52.0%
5ybwA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 42.0 4.41e-01 99.1% 92.9%
4wnyA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.54 44.0 4.21e-01 89.9% 90.2%
2iu4A01 3.40.50.10440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 0.54 47.0 4.14e-01 100.0% 91.8%
3bt7A02 2.40.50.1070 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 45.0 4.16e-01 92.7% 96.6%
3ixqA01 3.40.50.1360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 44.0 4.09e-01 93.6% 99.3%
2avnA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 46.0 3.62e-01 99.1% 93.5%
1wotA00 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.52 38.0 3.99e-01 77.1% 92.9%
1wyzA02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.52 39.0 3.93e-01 86.2% 80.9%
3ctzA02 3.40.350.10 Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain 0.52 43.0 3.72e-01 89.0% 82.3%
ECOD (96)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4941226 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.89 83.0 7.75e-01 100.0% 82.9%
5057477 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.87 76.0 7.96e-01 94.5% 100.0%
4928998 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.84 79.0 7.07e-01 100.0% 99.3%
4088649 2008.1.1.141 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 0.83 72.0 7.51e-01 94.5% 100.0%
5010590 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.82 72.0 7.38e-01 95.4% 97.1%
5057415 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.80 67.0 6.99e-01 99.1% 96.0%
4534691 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.79 72.0 6.66e-01 96.3% 85.9%
5024737 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.79 74.0 6.39e-01 100.0% 91.9%
4508113 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.79 69.0 7.13e-01 94.5% 100.0%
4942427 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.79 66.0 6.71e-01 94.5% 92.4%
5036859 2008.1.1.3 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc 0.78 53.0 6.27e-01 85.3% 100.0%
4222489 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.78 66.0 6.63e-01 94.5% 89.9%
5027581 2008.1.1.141 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 0.78 64.0 6.47e-01 87.2% 90.9%
4964258 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.78 68.0 6.15e-01 94.5% 100.0%
3287525 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.78 68.0 6.09e-01 94.5% 89.3%
4967964 2008.1.1.141 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 0.77 70.0 6.65e-01 96.3% 89.6%
4947992 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.77 69.0 6.90e-01 97.2% 94.5%
4988932 2008.1.1.141 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 0.77 69.0 6.62e-01 97.2% 89.6%
5080532 2008.4.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › TBP-interacting protein N-terminal domain-like › TBP-interacting protein N-terminal domain-like 0.77 65.0 6.59e-01 94.5% 91.7%
4488209 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.77 66.0 6.46e-01 95.4% 84.9%
4935861 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.77 66.0 6.44e-01 95.4% 84.2%
4089106 2008.1.1.141 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 0.77 69.0 6.46e-01 96.3% 93.8%
5082429 2008.1.1.141 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 0.77 67.0 6.43e-01 94.5% 88.0%
4931384 2008.1.1.141 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 0.76 67.0 6.55e-01 95.4% 92.5%
4947990 2008.1.1.218 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HTH_3 0.76 66.0 6.53e-01 92.7% 93.9%
4942425 2008.1.1.141 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 0.76 66.0 6.28e-01 92.7% 94.4%
4561496 2008.1.1.141 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 0.76 68.0 6.32e-01 97.2% 96.3%
4373997 2008.1.1.44 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › FokI_cleav_dom 0.76 69.0 5.60e-01 99.1% 74.5%
4446863 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.76 65.0 6.26e-01 95.4% 82.1%
4997775 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.76 68.0 6.85e-01 97.2% 98.2%
5064957 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.76 69.0 6.20e-01 100.0% 92.7%
4127413 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.75 65.0 6.66e-01 97.2% 96.2%
4941202 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.75 61.0 6.29e-01 86.2% 100.0%
4954708 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.75 64.0 6.72e-01 95.4% 100.0%
4930910 2008.1.1.219 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF790 0.75 65.0 6.26e-01 94.5% 92.8%
5059469 2008.1.1.114 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF4143 0.75 63.0 6.66e-01 94.5% 100.0%
4932970 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.75 62.0 6.35e-01 89.0% 98.1%
4940209 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.75 58.0 6.17e-01 88.1% 92.6%
5005103 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.75 68.0 6.78e-01 96.3% 100.0%
4940727 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.75 59.0 6.18e-01 90.8% 92.0%
4952288 2008.1.1.114 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF4143 0.74 64.0 6.66e-01 92.7% 100.0%
5031044 2008.1.1.141 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 0.74 65.0 6.25e-01 95.4% 88.8%
5072012 2008.1.1.3 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc 0.74 55.0 5.97e-01 93.6% 93.3%
5067597 2008.4.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › TBP-interacting protein N-terminal domain-like › TBP-interacting protein N-terminal domain-like 0.74 64.0 6.45e-01 94.5% 92.7%
4957244 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.74 63.0 6.48e-01 92.7% 96.2%
3945413 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.74 67.0 5.72e-01 99.1% 77.1%
4966826 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.73 65.0 6.43e-01 95.4% 93.9%
4931386 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.73 62.0 6.35e-01 93.6% 94.3%
5026622 2008.2.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like 0.73 54.0 5.76e-01 89.0% 87.4%
5041629 2008.1.1.219 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF790 0.73 62.0 6.20e-01 90.8% 100.0%
4929961 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.72 61.0 5.95e-01 94.5% 82.5%
3586874 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.72 65.0 4.70e-01 98.2% 88.5%
5017801 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.72 63.0 5.89e-01 95.4% 82.2%
5011096 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.72 53.0 4.95e-01 94.5% 62.2%
4457766 2008.1.1.201 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_CfrBI 0.72 65.0 4.54e-01 100.0% 41.4%
5031791 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.71 58.0 5.96e-01 87.2% 100.0%
3602325 2008.1.1.3 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc 0.71 65.0 6.23e-01 99.1% 98.4%
5051988 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.71 58.0 5.70e-01 89.0% 90.0%
5004671 2006.1.6.12 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.71 64.0 4.63e-01 100.0% 62.7%
4945329 2008.1.1.107 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD 0.70 63.0 4.97e-01 97.2% 63.3%
4969199 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.70 59.0 5.80e-01 91.7% 94.1%
4928481 2007.3.1.3 a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Succ_CoA_lig 0.70 63.0 4.28e-01 99.1% 35.9%
5067832 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.70 57.0 6.03e-01 86.2% 100.0%
140941 2008.1.1.8 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › BamHI 0.69 57.0 4.72e-01 89.0% 62.9%
3971737 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.69 61.0 4.45e-01 96.3% 42.8%
5000631 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.69 58.0 5.70e-01 90.8% 92.2%
3913962 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.69 61.0 5.05e-01 99.1% 88.7%
4027796 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.68 61.0 4.97e-01 99.1% 89.3%
4090404 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.68 60.0 6.01e-01 97.2% 100.0%
4937277 2008.1.1.108 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF234 0.68 58.0 5.45e-01 94.5% 86.7%
5041192 2007.9.1.4 a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR_2 0.67 60.0 5.51e-01 100.0% 81.4%
4966509 2007.9.1.4 a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR_2 0.67 60.0 5.62e-01 100.0% 88.9%
5009877 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.67 61.0 5.18e-01 100.0% 72.0%
5011600 2008.1.1.108 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF234 0.66 57.0 5.75e-01 93.6% 100.0%
3785016 7512.1.1.10 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_28 0.66 60.0 4.28e-01 100.0% 74.0%
4019354 2006.1.6.5 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Tfb4 0.65 58.0 4.47e-01 99.1% 88.4%
4012072 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.65 59.0 4.39e-01 100.0% 85.1%
4497527 2008.1.1.59 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 0.64 51.0 3.91e-01 85.3% 68.7%
None 0.63 55.0 4.15e-01 95.4% 91.5%
3686826 7512.1.1.10 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_28 0.63 44.0 3.82e-01 71.6% 94.3%
3983363 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.63 55.0 4.55e-01 99.1% 84.3%
4464139 2002.1.1.10 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IGPS 0.62 54.0 4.07e-01 96.3% 91.4%
3333727 2008.3.1.1 a/b three-layered sandwiches › Restriction endonuclease-like › Eukaryotic RPB5 N-terminal domain › Eukaryotic RPB5 N-terminal domain › RNA_pol_Rpb5_N 0.62 46.0 4.65e-01 78.9% 98.2%
3989293 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.61 51.0 5.11e-01 93.6% 95.7%
3722085 2007.1.4.3 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › NAD_kinase 0.61 56.0 4.69e-01 100.0% 65.6%
3975681 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.61 55.0 4.06e-01 100.0% 94.3%
3245213 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.60 47.0 4.79e-01 84.4% 99.0%
5037512 2006.1.3.9 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › OLD-like_TOPRIM 0.58 49.0 4.92e-01 96.3% 90.9%
3460821 2002.1.1.11 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PK 0.57 51.0 3.97e-01 100.0% 98.8%
5002342 2002.1.1.75 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › QRPTase_C 0.56 43.0 3.80e-01 81.7% 81.8%
3692516 7568.1.1.4 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT_2 0.56 46.0 4.53e-01 96.3% 82.5%
4947325 2002.1.1.75 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › QRPTase_C 0.56 43.0 3.69e-01 81.7% 77.7%
5073128 2002.1.1.75 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › QRPTase_C 0.54 43.0 3.69e-01 86.2% 75.0%
3660351 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.54 46.0 4.24e-01 93.6% 77.1%
4086723 316.1.1.43 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF294 0.54 40.0 3.60e-01 78.9% 63.9%
4301522 7519.1.1.1 a/b three-layered sandwiches › ATP synthase (F1-ATPase), gamma subunit › ATP synthase (F1-ATPase), gamma subunit › ATP synthase (F1-ATPase), gamma subunit › ATP-synt 0.51 45.0 3.43e-01 97.2% 50.0%