←Back to structures
IMGVR_UViG_3300029871_000021-3300029871-Ga0245314_10077222
Arc-VirIMGVR_UViG_3300029871_000021-3300029871-Ga0245314_10077222
Identity
- Kingdom:
- archaea
Quality
71.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-89
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jkgA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.66 | 55.0 | 4.49e-01 | 93.0% | 98.8% |
| 7obmA01 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.64 | 44.0 | 3.01e-01 | 72.1% | 29.3% |
| 8djfA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.59 | 41.0 | 2.90e-01 | 70.9% | 32.0% |
| 1e8cA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.54 | 45.0 | 3.40e-01 | 96.5% | 94.5% |
| 1vr8A00 | 3.40.1000.20 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like | 0.54 | 46.0 | 4.01e-01 | 97.7% | 69.6% |
| 2n8xA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.54 | 40.0 | 3.23e-01 | 79.1% | 85.5% |
| 3nvnA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 46.0 | 3.01e-01 | 96.5% | 42.8% |
| 4czxA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 41.0 | 2.80e-01 | 86.0% | 85.8% |
| 1k90A02 | 3.90.1760.10 | Alpha Beta › Alpha-Beta Complex › Adenylylcyclase toxin fold › Anthrax toxin, edema factor, central domain | 0.52 | 42.0 | 3.45e-01 | 88.4% | 71.7% |
| 3zl8A02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.51 | 40.0 | 3.09e-01 | 88.4% | 88.5% |
| 4fwwA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 41.0 | 2.63e-01 | 90.7% | 27.0% |
| 2ijaA00 | 3.30.2140.20 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › | 0.51 | 42.0 | 2.94e-01 | 91.9% | 58.2% |
| 8f5dA05 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.51 | 40.0 | 3.05e-01 | 88.4% | 83.7% |
| 5b4wA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 44.0 | 2.83e-01 | 98.8% | 38.9% |
| 2htaA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.50 | 43.0 | 3.01e-01 | 96.5% | 98.3% |
| 4huzA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.50 | 40.0 | 3.39e-01 | 88.4% | 79.5% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3788044 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.66 | 49.0 | 3.52e-01 | 77.9% | 28.3% |
| 3593728 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.62 | 51.0 | 4.38e-01 | 95.3% | 97.3% |
| 3591534 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.58 | 50.0 | 4.44e-01 | 96.5% | 70.4% |
| 3777243 | 220.1.1.161 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26659 | 0.58 | 40.0 | 3.51e-01 | 72.1% | 94.8% |
| 3426652 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.58 | 42.0 | 2.86e-01 | 76.7% | 71.9% |
| 5057575 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.57 | 41.0 | 2.88e-01 | 74.4% | 68.1% |
| 4085834 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.57 | 41.0 | 2.82e-01 | 75.6% | 63.3% |
| 4974181 | 331.3.1.74 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PF27226 | 0.56 | 39.0 | 3.78e-01 | 73.3% | 98.0% |
| 4176398 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.56 | 40.0 | 2.83e-01 | 75.6% | 78.9% |
| 3191832 | 12.3.1.36 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › DUF5127 | 0.56 | 41.0 | 2.94e-01 | 79.1% | 85.5% |
| 3997759 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.56 | 39.0 | 2.53e-01 | 72.1% | 19.5% |
| 4468976 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.55 | 40.0 | 2.78e-01 | 75.6% | 59.0% |
| 4385734 | 5.1.4.567 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Helveticin_J | 0.55 | 44.0 | 2.97e-01 | 87.2% | 81.4% |
| 3743943 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.55 | 40.0 | 2.59e-01 | 77.9% | 24.7% |
| 1290001 | 5.1.3.15 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Glu_cyclase_2 | 0.54 | 42.0 | 3.07e-01 | 82.6% | 99.6% |
| 5069568 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.54 | 38.0 | 3.77e-01 | 73.3% | 81.1% |
| 4267686 | 5.1.3.23 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL | 0.54 | 43.0 | 3.07e-01 | 90.7% | 97.3% |
| 7054 | 881.2.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › TM1622-like › TM1622-like › DUF3242 | 0.54 | 46.0 | 4.09e-01 | 97.7% | 74.0% |
| 1837476 | 331.1.1.6 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF3378 | 0.53 | 33.0 | 3.68e-01 | 70.9% | 80.6% |
| 3747900 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.53 | 43.0 | 2.64e-01 | 87.2% | 23.9% |
| 5045767 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.52 | 37.0 | 3.68e-01 | 74.4% | 80.0% |
| 4955776 | 881.2.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › TM1622-like › TM1622-like | 0.52 | 43.0 | 3.74e-01 | 97.7% | 74.3% |
| 3704178 | 5.1.4.47 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PHTB1_N | 0.51 | 41.0 | 2.74e-01 | 91.9% | 98.2% |
| 5022781 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.50 | 43.0 | 2.87e-01 | 95.3% | 42.0% |