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IMGVR_UViG_3300029928_000198-3300029928-Ga0116643_100008125
Arc-VirIMGVR_UViG_3300029928_000198-3300029928-Ga0116643_100008125
Identity
- Kingdom:
- archaea
Quality
80.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-114
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3dv9A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.64 | 36.0 | 4.31e-01 | 90.6% | 84.3% |
| 3i01A01 | 1.20.1270.30 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.62 | 48.0 | 3.97e-01 | 80.2% | 65.0% |
| 3qbrX00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.60 | 43.0 | 3.71e-01 | 99.1% | 47.8% |
| 1vw4L02 | 1.10.246.170 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.60 | 39.0 | 4.30e-01 | 90.6% | 82.4% |
| 2gfhA02 | 1.20.120.710 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain | 0.59 | 38.0 | 4.08e-01 | 96.2% | 77.9% |
| 2hoqA02 | 1.10.150.520 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.59 | 37.0 | 4.13e-01 | 93.4% | 82.3% |
| 3gi7A00 | 1.20.1270.180 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.57 | 33.0 | 3.43e-01 | 78.3% | 59.2% |
| 2dqbB00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.57 | 42.0 | 2.97e-01 | 78.3% | 30.9% |
| 1k87A02 | 1.10.2060.10 | Mainly Alpha › Orthogonal Bundle › PutA proline dehydrogenase (PRODH), domain 2 › PutA proline dehydrogenase (PRODH), domain 2 | 0.57 | 39.0 | 3.90e-01 | 96.2% | 68.8% |
| 2rp5A00 | 1.10.150.830 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.55 | 42.0 | 4.11e-01 | 99.1% | 72.6% |
| 2w53B00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 43.0 | 3.73e-01 | 90.6% | 51.4% |
| 2iw3A02 | 1.20.1390.20 | Mainly Alpha › Up-down Bundle › PWI domain › | 0.55 | 38.0 | 4.03e-01 | 95.3% | 82.2% |
| 4o8sA02 | 1.20.58.1790 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › JHP933, helical tail domain | 0.53 | 37.0 | 3.70e-01 | 100.0% | 70.1% |
| 2pkeA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.52 | 33.0 | 3.76e-01 | 81.1% | 88.5% |
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.52 | 32.0 | 3.73e-01 | 77.4% | 87.8% |
| 2h7bA01 | 1.20.120.1110 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › TAFH/NHR1 domain | 0.52 | 39.0 | 4.10e-01 | 99.1% | 90.6% |
| 4ks9A01 | 1.20.140.90 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Malonyl-CoA decarboxylase, oligemerization domain | 0.52 | 32.0 | 3.12e-01 | 99.1% | 52.4% |
| 3tqgB01 | 1.10.580.10 | Mainly Alpha › Orthogonal Bundle › Citrate Synthase; domain 1 › Citrate Synthase, domain 1 | 0.51 | 42.0 | 3.27e-01 | 100.0% | 39.2% |
| 1f5oA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 39.0 | 3.61e-01 | 86.8% | 59.7% |
| 2oebA00 | 1.10.520.30 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain | 0.51 | 43.0 | 3.90e-01 | 96.2% | 95.4% |
| 6tkyA03 | 1.20.58.740 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DOCK DHR2 domain, lobe C | 0.51 | 38.0 | 3.69e-01 | 93.4% | 68.9% |
| 1bdgA01 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.51 | 42.0 | 3.20e-01 | 94.3% | 91.8% |
| 1f1mA00 | 1.20.120.240 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Lipoprotein, type 6 | 0.50 | 38.0 | 3.30e-01 | 79.2% | 93.2% |
| 2kjgA00 | 1.20.120.970 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.50 | 35.0 | 3.60e-01 | 97.2% | 77.8% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3332576 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.68 | 49.0 | 4.36e-01 | 100.0% | 53.8% |
| 3231107 | 101.1.10.34 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N+CycT2-like_C | 0.68 | 43.0 | 3.11e-01 | 97.2% | 23.1% |
| 5000698 | 604.38.1.0 ↗ | alpha bundles › Spectrin repeat-like › Legionella effector SdeA 3-helical bundle › Legionella effector SdeA 3-helical bundle | 0.67 | 33.0 | 3.32e-01 | 100.0% | 47.6% |
| 4372101 | 7014.1.1.1 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA | 0.62 | 36.0 | 3.42e-01 | 100.0% | 47.2% |
| 3290948 | 3960.1.1.1 ↗ | alpha arrays › Aminoglycoside adenyltransferase AadA C-terminal domain › Aminoglycoside adenyltransferase AadA C-terminal domain › Aminoglycoside adenyltransferase AadA C-terminal domain › AadA_C | 0.60 | 33.0 | 3.39e-01 | 92.5% | 54.0% |
| 3992442 | 592.7.1.1 ↗ | alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain › GIPC1_GH2 | 0.60 | 37.0 | 4.04e-01 | 92.5% | 75.3% |
| 3760989 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.60 | 37.0 | 4.46e-01 | 88.7% | 100.0% |
| 3265013 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.60 | 48.0 | 3.79e-01 | 84.9% | 94.0% |
| 3278758 | 101.27.1.2 ↗ | alpha arrays › HTH › YidB-like › YidB-like › DUF937 | 0.59 | 50.0 | 4.74e-01 | 91.5% | 98.4% |
| 3444342 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.58 | 34.0 | 3.42e-01 | 100.0% | 55.5% |
| 4954319 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.58 | 34.0 | 2.69e-01 | 86.8% | 26.2% |
| 5027071 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.55 | 34.0 | 3.56e-01 | 98.1% | 67.4% |
| 4984393 | 179.1.1.1 ↗ | alpha bundles › CO dehydrogenase ISP C-domain like › CO dehydrogenase ISP C-domain like › CO dehydrogenase ISP C-domain like › Fer2_2 | 0.55 | 33.0 | 3.70e-01 | 92.5% | 81.3% |
| 3226789 | 5001.1.1.62 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › YIF1 | 0.54 | 43.0 | 3.51e-01 | 86.8% | 75.6% |
| 4936055 | 604.39.1.17 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › DUF2238 | 0.54 | 46.0 | 3.75e-01 | 100.0% | 49.3% |
| 4391836 | 1197.1.1.1 ↗ | alpha bundles › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › G3P_acyltransf | 0.53 | 48.0 | 3.80e-01 | 100.0% | 92.6% |
| 3667987 | 1079.1.1.0 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA | 0.52 | 46.0 | 3.79e-01 | 100.0% | 77.5% |
| 3464908 | 2484.1.1.176 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hexokinase_1+Hexokinase_2 | 0.52 | 45.0 | 3.05e-01 | 99.1% | 79.1% |
| 3793742 | 192.4.1.24 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › PF26431 | 0.52 | 46.0 | 4.33e-01 | 100.0% | 86.9% |
| 3703222 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.51 | 32.0 | 3.32e-01 | 92.5% | 68.4% |
| 3480799 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.51 | 41.0 | 3.80e-01 | 87.7% | 83.0% |
| 3602094 | 3572.1.1.0 ↗ | a+b complex topology › Cascade subunit Csa5 › Cascade subunit Csa5 › Cascade subunit Csa5 | 0.50 | 42.0 | 4.26e-01 | 91.5% | 99.0% |
| 5018143 | 604.39.1.0 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters | 0.50 | 45.0 | 3.84e-01 | 99.1% | 82.4% |
| 3723625 | 592.2.1.2 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like › WGG | 0.50 | 41.0 | 3.78e-01 | 92.5% | 68.1% |